Nucleotide Global Alignment
Description
- Query:
- TRCN0000474221
- Subject:
- XR_002957333.1
- Aligned Length:
- 2895
- Identities:
- 1578
- Gaps:
- 1303
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCCTTAAGACAAGTAGTTCCCCATGTGACCCCAGGTGGGCCCTGAACTTGGGATAACCAGGACAGGAGACTTGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGCAGGAGGTGCGGGGGCGAGGAGGGCTCTCTCCCGGGCGATTGGTCCTAACCCGAGGTTCCCTCGTGGCAAGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGAGCCGACTCCCCACTCGTGGGCTGATGCCCGAGGCAGACGCGGCAGGCAGGCGGCTTCGGGAGCGCATATCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCACCCATGGGGACGATGGCAGGCTGGCGAAGGGAGAGAGGTGGCGGCAGGACTACCATTTGAGGCTCTCAAAT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGTGTGGGGAAGAGGGAAGGAGAGGCGCGAAAAGGAGGAAAACCCCTGGAGACGCTGTGTCGGGCGGAGGCTAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGAGACCGGCTTCGCGCTCCAACGACGCGCATCACTCAGACTCCAAGGCAAGTGCCCGGGGCTAGATTTTCCGT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCCCTGGGGCTCTGGGGATCTCTGAGTCCATCCCAGGGCCCTCCAGGAACGCCTTCGGGAGCGCAGCCCGGCCC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CGCCGCTGCCGCTGTCACCCGTGGCCGCTCCCGCCTCGGTTCGTTTGTCTCCTCCCTCTAACGGCTCCGGCAGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AACCGGCGTCGGTGGCGTGGGTGACGTCGGCGTGGGGGGTGGGACTTCCTGCTTCGCGTGCCGCTGGGCCAAGG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GACAGAGCCCGCTCCTCCAGGCTGGTGGGGCGGTGCGATGAGGCGGCTTCTGGGCCATACGTCAGCACGTGGGG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGGCGCCGCACCCCTGAGGATCCCGGTCCACGCGGAGGAGTGGGGCTTTTCACCGCCGCCGCCGCCGCCCTCGG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ACCTCTCCCGGGATACTTCACATTTCCCTAGGGACGGGAGCCCGAGGGGTCCGTTCGGCCCTCTTCCTCTCGCT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GGGCCGACACCCCGCTGTAGGACCGTAACCCTTAGTCCCAATGCCTCCGTAAGCGGAGTTGAGTGGGTGCCTGT 962
Query 1 --------------------------------------------------------ATGTTAATT--------- 9
|.||| ||
Sbjct 963 GGTTGGAGCTGTGGAGGTGTCCCCGGTGGCGAGCGCGGCCAGAACTGCGGTCACTTAAGTT--TTCCGTGTGCG 1034
Query 10 -GATGAAAGGTTA-CGATGTGAGCATC----ATAA---AGCTAATTATCAGACACTG-----------AAGG-- 61
|.||.|||| | || ||.|.||.|| |||| .||| |..|.|||..||| ||||
Sbjct 1035 GGTTGCAAGG--AGCG-TGCGTGCGTCTGGTATAATTTGGCT--TCCTGAGATTCTGCCTTAGCAAGAAAGGAG 1103
Query 62 -----------CT------GAACAC----ACAAGGTTGCAGAATGAACATGTAAAGTTACAAAATGAACTCAAG 114
|| |||.|| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1104 TGGGAAATACCCTTGGAAAGAAAACTAAAACA--GTTGCAGAATGAACATGTAAAGTTACAAAATGAACTCAAG 1175
Query 115 CACCTGTTTAATGAAAAGCAAACTCAGCAGGAAAAACTTCAGCTCCTGCTTGAAGAACTAAGAGGAGAATTAGT 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1176 CACCTGTTTAATGAAAAGCAAACTCAGCAGGAAAAACTTCAGCTCCTGCTTGAAGAACTAAGAGGAGAATTAGT 1249
Query 189 AGAGAAAACTAAAGATTTAGAAGAAATGAAACTGCAGATATTAACTCCACAAAAATTGGAATTGCTAAGAGCCC 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1250 AGAGAAAACTAAAGATTTAGAAGAAATGAAACTGCAGATATTAACTCCACAAAAATTGGAATTGCTAAGAGCCC 1323
Query 263 AAATACAACAAGAATTAGAAACTCCAATGAGAGAACGTTTTAGGAATCTAGATGAAGAGGTAGAAAAGTATAGA 336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1324 AAATACAACAAGAATTAGAAACTCCAATGAGAGAACGTTTTAGGAATCTAGATGAAGAGGTAGAAAAGTATAGA 1397
Query 337 GCTGTATATAATAAGCTTCGCTATGAACATACATTTCTCAAGTCAGAATTTGAACACCAGAAGGAAGAGTATGC 410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1398 GCTGTATATAATAAGCTTCGCTATGAACATACATTTCTCAAGTCAGAATTTGAACACCAGAAGGAAGAGTATGC 1471
Query 411 ACGTATTTTAGATGAAGGAAAAATAAAATATGAATCAGAGATTGCAAGACTGGAGGAAGATAAAGAAGAACTAC 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1472 ACGTATTTTAGATGAAGGAAAAATAAAATATGAATCAGAGATTGCAAGACTGGAGGAAGATAAAGAAGAACTAC 1545
Query 485 GTAACCAGCTGCTTAATGTTGATCTCACAAAAGACAGCAAACGAGTGGAACAACTTGCTCGAGAAAAAGTCTAT 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1546 GTAACCAGCTGCTTAATGTTGATCTCACAAAAGACAGCAAACGAGTGGAACAACTTGCTCGAGAAAAAGTCTAT 1619
Query 559 TTGTGTCAAAAATTAAAAGGTTTAGAGGCTGAAGTAGCGGAATTAAAGGCTGAAAAGGAGAATTCTGAGGCTCA 632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1620 TTGTGTCAAAAATTAAAAGGTTTAGAGGCTGAAGTAGCGGAATTAAAGGCTGAAAAGGAGAATTCTGAGGCTCA 1693
Query 633 GGTGGAAAATGCCCAAAGAATACAGGTGCGGCAGTTGGCTGAGATGCAGGCTACAGTCAGATCCCTGGAGGCTG 706
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1694 GGTGGAAAATGCCCAAAGAATACAGGTGCGGCAGTTGGCTGAGATGCAGGCTACAGTCAGATCCCTGGAGGCTG 1767
Query 707 AAAAACAATCAGCTAATTTACGGGCAGAACGCTTGGAAAAAGAGCTACAATCAAGCAGTGAACAAAATACCTTT 780
|||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||
Sbjct 1768 AAAAACAATCAGCTAATTTACGGGCAGAACGTTTGGAAAAAGAGCTACAATCAAGCAGTGAACAAAATACCTTT 1841
Query 781 TTAATTAATAAATTGCATAAAGCTGAACGAGAAATAAATACATTGTCCAGTAAAGTAAAAGAACTTAAACATTC 854
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1842 TTAATTAATAAATTGCATAAAGCTGAACGAGAAATAAATACATTGTCCAGTAAAGTAAAAGAACTTAAACATTC 1915
Query 855 AAACAAACTGGAAATAACAGACATCAAACTGGAGACAGCAAGAGCTAAGAGTGAGCTAGAAAGAGAAAGGAATA 928
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1916 AAACAAACTGGAAATAACAGACATCAAACTGGAGACAGCAAGAGCTAAGAGTGAGCTAGAAAGAGAAAGGAATA 1989
Query 929 AGATTCAAAGTGAACTGGATGGATTACAGTCAGACAATGAAATTCTCAAAGCAGCTGTTGAACATCACAAAGTG 1002
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1990 AGATTCAAAGTGAACTGGATGGATTACAGTCAGACAATGAAATTCTCAAAGCAGCTGTTGAACATCACAAAGTG 2063
Query 1003 CTCTTAGTAGAAAAGGATCGTGAATTAATACGTAAAGTACAAGCTGCCAAAGAAGAAGGTTATCAAAAACTTGT 1076
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2064 CTCTTAGTAGAAAAGGATCGTGAATTAATACGTAAAGTACAAGCTGCCAAAGAAGAAGGTTATCAAAAACTTGT 2137
Query 1077 GGTATTACAAGATGAAAAGTTAGAACTCGAGAACAGATTAGCAGATTTGGAGAAAATGAAAGTGGAACATGATG 1150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2138 GGTATTACAAGATGAAAAGTTAGAACTCGAGAACAGATTAGCAGATTTGGAGAAAATGAAAGTGGAACATGATG 2211
Query 1151 TCTGGAGGCAATCTGAAAAGGATCAGTATGAAGAGAAATTGCGGGCTTCACAGATGGCAGAAGAGATCACCAGG 1224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2212 TCTGGAGGCAATCTGAAAAGGATCAGTATGAAGAGAAATTGCGGGCTTCACAGATGGCAGAAGAGATCACCAGG 2285
Query 1225 AAGGAGCTTCAGAGTGT--------------------------------------------------------- 1241
|||||||||||||||||
Sbjct 2286 AAGGAGCTTCAGAGTGTTAGGATGTTCTGTGATTCTCTTTCACTTTCCCTGCCCCAGCCCTGGAATTAAACATT 2359
Query 1242 ----------------------------------------------------------------TAGGTTAAAA 1251
||||||||||
Sbjct 2360 TATCTGAGGTGCTTTGATTCCTTTTTAATTGGAGAATGGCATTTAGAAACCAAAATCTCAACTCTAGGTTAAAA 2433
Query 1252 CTTCAGCAACAAATTGTGACTATTGAAAATGCAGAGAAGGAAAAAAATGAAAATTCTGACCTAAAACAGCAAAT 1325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2434 CTTCAGCAACAAATTGTGACTATTGAAAATGCAGAGAAGGAAAAAAATGAAAATTCTGACCTAAAACAGCAAAT 2507
Query 1326 CAGTAGTTTGCAGATCCAAGTGACTTCACTTGCACAGTCAGAGAATGACTTGCTGAATTCAAACCAAATGCTGA 1399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2508 CAGTAGTTTGCAGATCCAAGTGACTTCACTTGCACAGTCAGAGAATGACTTGCTGAATTCAAACCAAATGCTGA 2581
Query 1400 AGGAAATGGTGGAGAGATTAAAACAAGAATGCCGAAATTTTAGAAGCCAAGCTGAAAAAGCGCAACTAGAAGCT 1473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2582 AGGAAATGGTGGAGAGATTAAAACAAGAATGCCGAAATTTTAGAAGCCAAGCTGAAAAAGCGCAACTAGAAGCT 2655
Query 1474 GAAAAGACATTGGAAGAGAAACAGATACAGTGGTTGGAAGAAAAGCATAAGCTTCATGAGCGTATCACAGACAG 1547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2656 GAAAAGACATTGGAAGAGAAACAGATACAGTGGTTGGAAGAAAAGCATAAGCTTCATGAGCGTATCACAGACAG 2729
Query 1548 AGAAGAAAAGTACAATCAAGCTAAGGAGAAACTGCAGCGAGCTGCAATTGCCCAGAAAAAGCTTGAACAGGATC 1621
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2730 AGAAGAAAAGTACAATCAAGCTAAGGAGAAACTGCAGCGAGCTGCAATTGCCCA-------------------- 2783
Query 1622 TTGAGTTGGGATGCCCTTCTGTGACTGATACATACAGAGAGAGTGTATTCCCCCCACCCCCATTGAAGAGAGAT 1695
Sbjct 2784 -------------------------------------------------------------------------- 2783
Query 1696 CTCTTGAAG 1704
Sbjct 2784 --------- 2783
