Nucleotide Global Alignment
Description
- Query:
- TRCN0000474228
- Subject:
- NM_001301832.1
- Aligned Length:
- 1425
- Identities:
- 916
- Gaps:
- 387
Alignment
Query 1 ATGCAGAAATCTACAAATTCTGATACTTCCGTGGAAACACTGAATTCTACCCGCCAAGGCACAGGAGCTGTGCA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 AATGAGAATCAAAAATGCCAACAGCCACCATGACAGGCTCAGCCAAAGTAAATCCATGATCCTCACCGATGTCG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 GGAAGGTCACTGAACCTATATCCAGACACAGAAGGAATCATTCACAGCATATCTTGAAAGATGTCATTCCTCCA 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 TTGGAACAACTGATGGTTGAAAAAGAAGGTTATCTGCAAAAAGCTAAAATTGCAGATGGAGGAAAGAAACTAAG 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 GAAAAACTGGTCTACTTCCTGGATTGTTCTTTCTAGTCGAAGAATTGAATTTTACAAAGAATCCAAGCAACAGG 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 CTCTGTCCAATATGAAAACTGGGCACAAACCAGAAAGTGTGGATTTGTGTGGAGCACACATTGAATGGGCCAAG 444
||||||||..|||||||....||||||||||||||||||||.|||||.||.|||||||||||.
Sbjct 1 -----------ATGAAAACCAGGCACAACGTGGAAAGTGTGGATTTGTGTGGTGCACATATAGAATGGGCCAAA 63
Query 445 GAAAAATCGAGCAGAAAGAATGTCTTTCAGATCACAACAGTATCAGGAAATGAGTTCCTTCTACAGTCAGATAT 518
||||||||.||||||||||.|||||||||||||||||||||.||||||||||||||||||||||||||||||||
Sbjct 64 GAAAAATCAAGCAGAAAGAGTGTCTTTCAGATCACAACAGTGTCAGGAAATGAGTTCCTTCTACAGTCAGATAT 137
Query 519 TGACTTCATCATATTGGATTGGTTCCACGCTATCAAAAATGCAATTGACAGATTGCCAAAGGATTCAAGTTGTC 592
|||||||.|||||||||||||||||||.|||||||||||||||||||||||||||||||||.||.||||||||.
Sbjct 138 TGACTTCCTCATATTGGATTGGTTCCAAGCTATCAAAAATGCAATTGACAGATTGCCAAAGAATCCAAGTTGTG 211
Query 593 CATCAAGAAACCTGGAATTATTCAAAATCCAAAGATCCTCTAGCACTGAATTGCTAAGTCACTACGACAGTGAT 666
..|| ||||||.||.|||||..|.||.||||||||.||..|||||.|||..|||||||.|.|||..|||
Sbjct 212 GGTC------CCTGGAGTTGTTCAATTTGCAGAGATCCTCAAGTTCTGAACTGCCGAGTCACTGCCACATCGAT 279
Query 667 ATAAAAGAACAGAAACCAGAGCACAGAAAATCTTTAATGTTCAGACTGCATCACAGTGCTTCCGATACAAGCGA 740
|.||||||||||||||||||.|||||.||.||.||.|||||..|||||||.|||||||||||.||||||||.||
Sbjct 280 AGAAAAGAACAGAAACCAGAACACAGGAAGTCCTTCATGTTTCGACTGCACCACAGTGCTTCTGATACAAGTGA 353
Query 741 CAAAAATCGAGTTAAAAGCAGATTAAAGAAGTTTATTACCCGAAGACCTTCCCTGAAAACTCTGCAAGAAAAAG 814
|||.|||||.||.||.||||||.|.||||||||.||..||.||||||||||.|||||||||.||||.|||||.|
Sbjct 354 CAAGAATCGCGTGAAGAGCAGACTGAAGAAGTTCATCTCCAGAAGACCTTCTCTGAAAACTTTGCAGGAAAAGG 427
Query 815 GACTTATTAAAGATCAAATTTTTGGCTCTCATCTGCACAAAGTGTGTGAACGTGAAAATTCCACAGTTCCGTGG 888
||||.||||||||||||||||||||||||||||||||||.||||||||||||.|||.|||||||||||||.|||
Sbjct 428 GACTCATTAAAGATCAAATTTTTGGCTCTCATCTGCACACAGTGTGTGAACGAGAACATTCCACAGTTCCATGG 501
Query 889 TTTGTAAAGCAATGCATTGAAGCTGTTGAGAAAAGAGGTCTAGATGTTGATGGAATATATCGAGTTAGTGGCAA 962
|||||||||||||||||||||||||||||.||||||||.|||||.|||||||||||.|||||||||||||||||
Sbjct 502 TTTGTAAAGCAATGCATTGAAGCTGTTGAAAAAAGAGGCCTAGACGTTGATGGAATTTATCGAGTTAGTGGCAA 575
Query 963 TCTGGCAACAATACAGAAGTTAAGATTTATTGTCAACCAAGAAGAGAAGCTGAATTTGGACGACAGCCAGTGGG 1036
|||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||
Sbjct 576 TCTTGCAACAATACAGAAGTTAAGATTTATTGTCAACCAAGAAGAGAAGCTGAATTTGGATGACAGCCAGTGGG 649
Query 1037 AGGACATCCACGTTGTCACCGGAGCACTGAAGATGTTTTTCCGGGAGCTGCCTGAGCCGCTCTTCCCTTACAGT 1110
|||||||||||||.||||||||||||||||||||||||||||||||||||.||||.||||||||||||||||||
Sbjct 650 AGGACATCCACGTCGTCACCGGAGCACTGAAGATGTTTTTCCGGGAGCTGTCTGAACCGCTCTTCCCTTACAGT 723
Query 1111 TTCTTTGAGCAGTTTGTGGAAGCGATCAAAAAGCAAGACAACAACACAAGAATTGAAGCTGTAAAATCTCTTGT 1184
||||||||||.|||||||||.|||||||||||.|||||||.|||...||.|||||||.||.|.|..|||||.||
Sbjct 724 TTCTTTGAGCGGTTTGTGGAGGCGATCAAAAAACAAGACAGCAATGAAAAAATTGAAACTATGAGGTCTCTGGT 797
Query 1185 ACAAAAACTCCCTCCGCCAAATCGTGACACCATGAAAGTCCCCTTTGGACATCTAACTAAGATAGTGGCCAAAG 1258
|.||...||||||||.|||||||.|||.|||||||||.|||.|||..||||||||||.||||||||||||||||
Sbjct 798 AAAACGTCTCCCTCCACCAAATCATGATACCATGAAAATCCTCTTCAGACATCTAACCAAGATAGTGGCCAAAG 871
Query 1259 CCTCCAAGAACCTCATGTCCACGCAAAGCTTGGGGATTGTATTTGGACCTACCCTTCTGCGAGCTGAAAATGAA 1332
|||||.||||.|||||||||||.|||||||||||||||||.||||||||.||||||||||||||.||||||||.
Sbjct 872 CCTCCCAGAATCTCATGTCCACCCAAAGCTTGGGGATTGTGTTTGGACCCACCCTTCTGCGAGCGGAAAATGAG 945
Query 1333 ACAGGAAACATGGCGATCCACATGGTCTACCAGAACCAGATAGCTGAGCTCATGCTGAGTGAGTACAGTAAGAT 1406
.||||.||..|.|||.||||||||||.|||||.|||||||||||.|||.|||||||||.|||||||..||||||
Sbjct 946 TCAGGGAATGTAGCGGTCCACATGGTATACCAAAACCAGATAGCAGAGTTCATGCTGACTGAGTACGATAAGAT 1019
Query 1407 CTTCGGCTCAGAGGAAGAC 1425
||||.||||||||||||||
Sbjct 1020 CTTCAGCTCAGAGGAAGAC 1038