Nucleotide Global Alignment

Description

Query:
TRCN0000474228
Subject:
XM_006498399.3
Aligned Length:
1426
Identities:
1195
Gaps:
83

Alignment

Query    1  ATGCAGAAATCTACAAATTCTGATACTTCCGTGGAAACACTGAATTCTACCCGCCAAGGCACAGGAGCTGTGCA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  AATGAGAATCAAAAATGCCAACAGCCACCATGACAGGCTCAGCCAAAGTAAATCCATGATCCTCACCGATGTCG  148
             |||||||||||||||||||||||||||||.|||||||..|||||||.|||||||||||||||||||||||..|
Sbjct    1  -ATGAGAATCAAAAATGCCAACAGCCACCAAGACAGGCAGAGCCAAACTAAATCCATGATCCTCACCGATGCTG  73

Query  149  GGAAGGTCACTGAACCTATATCCAGACACAGAAGGAATCATTCACAGCATATCTTGAAAGATGTCATTCCTCCA  222
            |||||||||||||||||||.|||.|.||||||||||||||||||||||||.|.|||||||||||||||||.|||
Sbjct   74  GGAAGGTCACTGAACCTATTTCCCGGCACAGAAGGAATCATTCACAGCATGTGTTGAAAGATGTCATTCCACCA  147

Query  223  TTGGAACAACTGATGGTTGAAAAAGAAGGTTATCTGCAAAAAGCTAAAATTGCAGATGGAGGAAAGAAACTAAG  296
            .|.|||||.|..|||||||||||||||||.|||||.||||||||.|||||||||||||||||||||||||||||
Sbjct  148  CTAGAACATCCAATGGTTGAAAAAGAAGGGTATCTTCAAAAAGCCAAAATTGCAGATGGAGGAAAGAAACTAAG  221

Query  297  GAAAAACTGGTCTACTTCCTGGATTGTTCTTTCTAGTCGAAGAATTGAATTTTACAAAGAATCCAAGCAACAGG  370
            ||||||||||||||||||||||||||||||||||.||||||.||||||||||||||||||.||||||||.||.|
Sbjct  222  GAAAAACTGGTCTACTTCCTGGATTGTTCTTTCTGGTCGAAAAATTGAATTTTACAAAGACTCCAAGCAGCAAG  295

Query  371  CTCTGTCC-AATATGAAAACTGGGCACAAACCAGAAAGTGTGGATTTGTGTGGAGCACACATTGAATGGGCCAA  443
            |||| ||| ||.||||||||..|||||||....||||||||||||||||||||.|||||.||.|||||||||||
Sbjct  296  CTCT-TCCTAACATGAAAACCAGGCACAACGTGGAAAGTGTGGATTTGTGTGGTGCACATATAGAATGGGCCAA  368

Query  444  GGAAAAATCGAGCAGAAAGAATGTCTTTCAGATCACAACAGTATCAGGAAATGAGTTCCTTCTACAGTCAGATA  517
            .||||||||.||||||||||.|||||||||||||||||||||.|||||||||||||||||||||||||||||||
Sbjct  369  AGAAAAATCAAGCAGAAAGAGTGTCTTTCAGATCACAACAGTGTCAGGAAATGAGTTCCTTCTACAGTCAGATA  442

Query  518  TTGACTTCATCATATTGGATTGGTTCCACGCTATCAAAAATGCAATTGACAGATTGCCAAAGGATTCAAGTTGT  591
            ||||||||.|||||||||||||||||||.|||||||||||||||||||||||||||||||||.||.||||||||
Sbjct  443  TTGACTTCCTCATATTGGATTGGTTCCAAGCTATCAAAAATGCAATTGACAGATTGCCAAAGAATCCAAGTTGT  516

Query  592  CCATCAAGAAACCTGGAATTATTCAAAATCCAAAGATCCTCTAGCACTGAATTGCTAAGTCACTACGACAGTGA  665
            ...||      ||||||.||.|||||..|.||.||||||||.||..|||||.|||..|||||||.|.|||..||
Sbjct  517  GGGTC------CCTGGAGTTGTTCAATTTGCAGAGATCCTCAAGTTCTGAACTGCCGAGTCACTGCCACATCGA  584

Query  666  TATAAAAGAACAGAAACCAGAGCACAGAAAATCTTTAATGTTCAGACTGCATCACAGTGCTTCCGATACAAGCG  739
            ||.||||||||||||||||||.|||||.||.||.||.|||||..|||||||.|||||||||||.||||||||.|
Sbjct  585  TAGAAAAGAACAGAAACCAGAACACAGGAAGTCCTTCATGTTTCGACTGCACCACAGTGCTTCTGATACAAGTG  658

Query  740  ACAAAAATCGAGTTAAAAGCAGATTAAAGAAGTTTATTACCCGAAGACCTTCCCTGAAAACTCTGCAAGAAAAA  813
            ||||.|||||.||.||.||||||.|.||||||||.||..||.||||||||||.|||||||||.||||.|||||.
Sbjct  659  ACAAGAATCGCGTGAAGAGCAGACTGAAGAAGTTCATCTCCAGAAGACCTTCTCTGAAAACTTTGCAGGAAAAG  732

Query  814  GGACTTATTAAAGATCAAATTTTTGGCTCTCATCTGCACAAAGTGTGTGAACGTGAAAATTCCACAGTTCCGTG  887
            |||||.||||||||||||||||||||||||||||||||||.||||||||||||.|||.|||||||||||||.||
Sbjct  733  GGACTCATTAAAGATCAAATTTTTGGCTCTCATCTGCACACAGTGTGTGAACGAGAACATTCCACAGTTCCATG  806

Query  888  GTTTGTAAAGCAATGCATTGAAGCTGTTGAGAAAAGAGGTCTAGATGTTGATGGAATATATCGAGTTAGTGGCA  961
            ||||||||||||||||||||||||||||||.||||||||.|||||.|||||||||||.||||||||||||||||
Sbjct  807  GTTTGTAAAGCAATGCATTGAAGCTGTTGAAAAAAGAGGCCTAGACGTTGATGGAATTTATCGAGTTAGTGGCA  880

Query  962  ATCTGGCAACAATACAGAAGTTAAGATTTATTGTCAACCAAGAAGAGAAGCTGAATTTGGACGACAGCCAGTGG  1035
            ||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||
Sbjct  881  ATCTTGCAACAATACAGAAGTTAAGATTTATTGTCAACCAAGAAGAGAAGCTGAATTTGGATGACAGCCAGTGG  954

Query 1036  GAGGACATCCACGTTGTCACCGGAGCACTGAAGATGTTTTTCCGGGAGCTGCCTGAGCCGCTCTTCCCTTACAG  1109
            ||||||||||||||.||||||||||||||||||||||||||||||||||||.||||.|||||||||||||||||
Sbjct  955  GAGGACATCCACGTCGTCACCGGAGCACTGAAGATGTTTTTCCGGGAGCTGTCTGAACCGCTCTTCCCTTACAG  1028

Query 1110  TTTCTTTGAGCAGTTTGTGGAAGCGATCAAAAAGCAAGACAACAACACAAGAATTGAAGCTGTAAAATCTCTTG  1183
            |||||||||||.|||||||||.|||||||||||.|||||||.|||...||.|||||||.||.|.|..|||||.|
Sbjct 1029  TTTCTTTGAGCGGTTTGTGGAGGCGATCAAAAAACAAGACAGCAATGAAAAAATTGAAACTATGAGGTCTCTGG  1102

Query 1184  TACAAAAACTCCCTCCGCCAAATCGTGACACCATGAAAGTCCCCTTTGGACATCTAACTAAGATAGTGGCCAAA  1257
            ||.||...||||||||.|||||||.|||.|||||||||.|||.|||..||||||||||.|||||||||||||||
Sbjct 1103  TAAAACGTCTCCCTCCACCAAATCATGATACCATGAAAATCCTCTTCAGACATCTAACCAAGATAGTGGCCAAA  1176

Query 1258  GCCTCCAAGAACCTCATGTCCACGCAAAGCTTGGGGATTGTATTTGGACCTACCCTTCTGCGAGCTGAAAATGA  1331
            ||||||.||||.|||||||||||.|||||||||||||||||.||||||||.||||||||||||||.||||||||
Sbjct 1177  GCCTCCCAGAATCTCATGTCCACCCAAAGCTTGGGGATTGTGTTTGGACCCACCCTTCTGCGAGCGGAAAATGA  1250

Query 1332  AACAGGAAACATGGCGATCCACATGGTCTACCAGAACCAGATAGCTGAGCTCATGCTGAGTGAGTACAGTAAGA  1405
            ..||||.||..|.|||.||||||||||.|||||.|||||||||||.|||.|||||||||.|||||||..|||||
Sbjct 1251  GTCAGGGAATGTAGCGGTCCACATGGTATACCAAAACCAGATAGCAGAGTTCATGCTGACTGAGTACGATAAGA  1324

Query 1406  TCTTCGGCTCAGAGGAAGAC  1425
            |||||.||||||||||||||
Sbjct 1325  TCTTCAGCTCAGAGGAAGAC  1344

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