Nucleotide Global Alignment
Description
- Query:
- TRCN0000474266
- Subject:
- XM_006499451.2
- Aligned Length:
- 2854
- Identities:
- 1421
- Gaps:
- 1276
Alignment
Query 1 ATGGGAGTCCCGGCGTTCTTCCGCTGGCTCAGCCGCAAGTACCCGTCCATCATAGTCAACTGCGTGGAAGAGAA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GCCAAAAGAATGCAATGGTGTAAAGATTCCAGTTGATGCCAGTAAACCTAATCCAAATGATGTGGAGTTTGATA 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 ATCTGTATTTGGATATGAATGGAATCATCCATCCCTGTACTCATCCTGAAGACAAACCAGCACCAAAAAATGAA 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GATGAAATGATGGTTGCAATTTTTGAGTACATTGACAGACTTTTCAGTATTGTAAGACCAAGAAGACTTCTCTA 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 CATGGCAATAGATGGAGTGGCACCACGTGCTAAAATGAACCAGCAGCGTTCAAGGAGGTTCAGGGCATCAAAAG 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 AAGGAATGGAAGCAGCAGTCGAGAAGCAGCGAGTCAGGGAAGAAATATTGGCAAAAGGTGGCTTTCTTCCTCCA 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 GAAGAAATAAAAGAAAGATTTGACAGCAACTGTATTACACCAGGAACTGAATTCATGGACAATCTTGCTAAATG 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 CCTTCGCTATTACATAGCTGATCGTTTAAATAATGACCCTGGGTGGAAAAATTTGACAGTTATTTTATCTGATG 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 CTAGTGCTCCTGGTGAAGGAGAACATAAAATCATGGATTACATTAGAAGGCAAAGAGCCCAGCCTAACCATGAC 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 CCAAATACTCATCATTGTTTATGTGGAGCAGATGCTGATCTCATTATGCTTGGCCTTGCCACACATGAACCGAA 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 CTTTACCATTATTAGAGAAGAATTCAAACCAAACAAGCCCAAACCATGTGGTCTTTGTAATCAGTTTGGACATG 814
Sbjct 1 -------------------------------------------------------------------------- 0
Query 815 AGGTCAAAGATTGTGAAGGTTTGCCAAGAGAAAAGAAGGGAAAGCATGATGAACTTGCCGATAGTCTTCCTTGT 888
Sbjct 1 -------------------------------------------------------------------------- 0
Query 889 GCAGAAGGAGAGTTTATCTTCCTTCGGCTTAATGTTCTTCGTGAGTATTTGGAAAGAGAACTCACAATGGCCAG 962
Sbjct 1 -------------------------------------------------------------------------- 0
Query 963 CCTACCATTCACATTTGATGTTGAGAGGAGCATTGATGACTGGGTTTTCATGTGCTTCTTTGTGGGAAATGACT 1036
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1037 TCCTCCCTCATTTGCCATCGTTAGAGATTAGGGAAAATGCAATTGACCGTTTGGTTAACATATACAAAAATGTG 1110
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1111 GTACACAAAACTGGGGGTTACCTTACAGAAAGTGGTTATGTCAATCTGCAAAGAGTACAGATGATCATGTTAGC 1184
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1185 AGTTGGTGAAGTTGAGGATAGCATTTTTAAAAAGAGAAAGGATGATGAGGACAGTTTTAGAAGACGACAGAAAG 1258
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1259 AAAAAAGAAAGAGAATGAAGAGAGATCAACCAGCTTTCACTCCTAGTGGAATATTAACTCCTCATGCCTTGGGT 1332
|||||||||||||||||||||||.||||||||||||||||||||.|||||||||||||||
Sbjct 1 --------------ATGAAGAGAGATCAACCAGCTTTTACTCCTAGTGGAATATTAACACCTCATGCCTTGGGT 60
Query 1333 TCAAGAAATTCACCAGGTTCTCAAGTAGCCAGTAATCCGAGACAAGCAGCCTATGAAATGAGGATGCAGAATAA 1406
|||||||||||||||||||.||||||||||||||||||.|||||||||||||||||||||||||||||||..||
Sbjct 61 TCAAGAAATTCACCAGGTTGTCAAGTAGCCAGTAATCCAAGACAAGCAGCCTATGAAATGAGGATGCAGAGAAA 134
Query 1407 CTCTAGTCCTTCGATATCTCCTAATACGAGTTTCACATCTGATGGCTCCCCGTCTCCATTAGGAGGAATTAAGC 1480
||||||||||||.||||||||||||||.|||||..||||||||||||||||.||||||.||||||||||||||.
Sbjct 135 CTCTAGTCCTTCAATATCTCCTAATACAAGTTTTGCATCTGATGGCTCCCCATCTCCACTAGGAGGAATTAAGA 208
Query 1481 GAAAAGCAGAAGACAGTGACAGTGAACCTGAGCCAGAGGATAATGTCAGGTTATGGGAAGCTGGCTGGAAGCAG 1554
|||||||||||||||||||||||||.||.||||||||||||||.||||||||||||||||||||.||||||||.
Sbjct 209 GAAAAGCAGAAGACAGTGACAGTGAGCCAGAGCCAGAGGATAACGTCAGGTTATGGGAAGCTGGTTGGAAGCAA 282
Query 1555 CGGTACTACAAGAACAAATTTGATGTGGATGCAGCTGATGAGAAATTCCGTCGGAAAGTTGTGCAGTCGTACGT 1628
||.|||||||||||||||||||||||.|||||||||||||||||||||||.||.||.|||||.|||||.|||||
Sbjct 283 CGATACTACAAGAACAAATTTGATGTAGATGCAGCTGATGAGAAATTCCGACGTAAGGTTGTTCAGTCCTACGT 356
Query 1629 TGAAGGACTTTGCTGGGTTCTTAGATATTATTACCAGGGCTGTGCTTCCTGGAAGTGGTATTATCCATTTCATT 1702
|||||||||.||||||||||||.|.||||||||||||||||||||||||||||||||||||||||||||.||||
Sbjct 357 TGAAGGACTGTGCTGGGTTCTTCGCTATTATTACCAGGGCTGTGCTTCCTGGAAGTGGTATTATCCATTCCATT 430
Query 1703 ATGCACCATTTGCTTCAGACTTTGAAGGCATTGCAGACATGCCATCTGATTTTGAGAAGGGTACGAAACCGTTT 1776
|||||||||||||.||||||||||||||.||||||||||||.|.|||||.|||||.|||||.||.|||||||||
Sbjct 431 ATGCACCATTTGCCTCAGACTTTGAAGGTATTGCAGACATGTCCTCTGAATTTGAAAAGGGCACAAAACCGTTT 504
Query 1777 AAACCACTAGAACAACTTATGGGGGTATTTCCAGCTGCAAGTGGTAATTTTCTACCTCCATCATGGCGGAAGCT 1850
||.|||||.||||||||.||||||||.||.|||||||||||||||||.||||||||||||.|||||||||||||
Sbjct 505 AAGCCACTGGAACAACTAATGGGGGTTTTCCCAGCTGCAAGTGGTAACTTTCTACCTCCAACATGGCGGAAGCT 578
Query 1851 CATGAGTGATCCTGATTCTAGTATAATTGACTTCTATCCTGAAGATTTTGCTATTGATTTGAATGGGAAGAAAT 1924
|||||||||.||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 579 CATGAGTGACCCTGATTCCAGTATAATTGACTTCTATCCTGAAGATTTTGCTATTGATTTGAATGGGAAGAAAT 652
Query 1925 ATGCATGGCAAGGTGTTGCTCTCTTGCCATTCGTGGATGAGCGAAGGCTACGAGCTGCCCTAGAAGAGGTATAC 1998
||||||||||||||||||||||.||||||||.|||||||||||||||||.|||||.||.|||||||||||.|||
Sbjct 653 ATGCATGGCAAGGTGTTGCTCTATTGCCATTTGTGGATGAGCGAAGGCTGCGAGCGGCTCTAGAAGAGGTGTAC 726
Query 1999 CCAGACCTCACTCCAGAAGAGACCAGAAGAAACAGCCTTGGAGGTGATGTCTTATTTGTGGGGAAACATCACCC 2072
||||||||||||||||||||||.|||.|||||.||.||||||||||||||.||.||||||||.||||.|||.||
Sbjct 727 CCAGACCTCACTCCAGAAGAGAACAGGAGAAATAGTCTTGGAGGTGATGTTTTGTTTGTGGGAAAACTTCATCC 800
Query 2073 ACTCCATGACTTCATTTTAGAGCTGTACCAGACAGGTTCCACAGAGCCAGTGGAGGTACCCCCTGAACTATGTC 2146
|||.|..||||||||||||||||||||.|||||.|||||||||||||||||.||.||.||.||||||.|.||||
Sbjct 801 ACTACGCGACTTCATTTTAGAGCTGTATCAGACGGGTTCCACAGAGCCAGTTGATGTGCCACCTGAATTGTGTC 874
Query 2147 ATGGGATTCAAGGAAAGTTTTCTTTGGATGAAGAAGCCATTCTTCCAGATCAAAATAGTATGTTCTCCTGTTCC 2220
|.|||||||||||.|.||||||||||||||||||||||||||||||||| |.|||.|||||||||.|||||.||
Sbjct 875 ACGGGATTCAAGGGACGTTTTCTTTGGATGAAGAAGCCATTCTTCCAGA-CCAAACAGTATGTTCCCCTGTGCC 947
Query 2221 TATGTTAAGGGATCTGACACAGAACACTGTAGTCAGTATTAATTTTAAAGACCCACAGTTTGCTGAAGATTACA 2294
.|||||..||||.||||||||||||||||.|||||||||||||||||||||.||||||||||||||||||||..
Sbjct 948 CATGTTGCGGGACCTGACACAGAACACTGCAGTCAGTATTAATTTTAAAGATCCACAGTTTGCTGAAGATTATG 1021
Query 2295 TTTTTAAAGCTGTAATGCTTCCAGGAGCAAGAAAGCCAGCAGCAGTACTGAAACCTAGTGACTGGGAAAAATCC 2368
||||||||||||.||||||||||||||||||||||||||||.||||.|||||||||.|||||||||||||||||
Sbjct 1022 TTTTTAAAGCTGCAATGCTTCCAGGAGCAAGAAAGCCAGCAACAGTTCTGAAACCTGGTGACTGGGAAAAATCC 1095
Query 2369 AGCAATGGACGGCAGTGGAAGCCTCAGCTTGGCTTTAACCGTGACCGGAGGCCTGTGCACCTGGATCAGGCAGC 2442
||||||||.|||||.|||||.||||||||||||||||||||.||||||.|||||||.||||||||.||||||||
Sbjct 1096 AGCAATGGGCGGCAATGGAAACCTCAGCTTGGCTTTAACCGGGACCGGCGGCCTGTTCACCTGGACCAGGCAGC 1169
Query 2443 CTTCAGGACTTTGGGCCATGTGATGCCAAGAGGCTCAGGAACTGGCATTTACAGCAATGCTGCACCACCACCTG 2516
|||.||.|||||.||||||||.|..|||||||||||.||.||..|..||||.|..||..||||||.||||||||
Sbjct 1170 CTTTAGAACTTTAGGCCATGTTACACCAAGAGGCTCGGGGACGAGTGTTTATACGAACACTGCACTACCACCTG 1243
Query 2517 TGACTTACCAGGGAAACTTATACAGGCCGCTTTTGAGAGGACAAGCCCAGATTCCAAAACTTATGTCAAATATG 2590
..|.|||||||||.|||...||||||||.||..|||||||.|||||.|||||.|||||||||||||||||||||
Sbjct 1244 CCAATTACCAGGGGAACAATTACAGGCCACTGCTGAGAGGTCAAGCTCAGATCCCAAAACTTATGTCAAATATG 1317
Query 2591 AGGCCCCAGGATTCCTGGCGAGGTCCTCCTCCCCTTTTCCAGCAGCAAAGGTTTGACAGAGGCGTTGGGGCTGA 2664
||||||||.||||||||||||||.||||||||.||||||||||||||.||.|||||.|||.|.|||||.|||||
Sbjct 1318 AGGCCCCAAGATTCCTGGCGAGGCCCTCCTCCTCTTTTCCAGCAGCATAGATTTGAGAGAAGTGTTGGAGCTGA 1391
Query 2665 ACCTCTGCTCCCATGGAACCGGATGCTGCAAACCCAGAATGCAGCCTTCCAGCCAAACCAGTACCAGATGCTAG 2738
||||||.||.|||||||||||||||.|.||||.|||.|||||||||||.||||||||.||||||||||||||||
Sbjct 1392 ACCTCTACTGCCATGGAACCGGATGATCCAAAACCAAAATGCAGCCTTTCAGCCAAATCAGTACCAGATGCTAG 1465
Query 2739 CTGGGCCTGGTGGGTATCCACCCAGACGAGATGAT---CGTGGAGGGAGACAGGGATATCCCAGAGAAGGAAGG 2809
..||.|||||.||.||||||||||||||.||.||| ||.||||||||||||||||||||||||||||||.||
Sbjct 1466 GAGGACCTGGAGGCTATCCACCCAGACGTGACGATCACCGAGGAGGGAGACAGGGATATCCCAGAGAAGGACGG 1539
Query 2810 AAATACCCTTTGCCACCACCCTCAGGAAGATACAATTGGAAT 2851
|||||||||||||||||||||||.||||||||||.|||||||
Sbjct 1540 AAATACCCTTTGCCACCACCCTCGGGAAGATACAGTTGGAAT 1581
