Nucleotide Global Alignment
Description
- Query:
- TRCN0000474295
- Subject:
- XM_011246830.1
- Aligned Length:
- 2226
- Identities:
- 1028
- Gaps:
- 1113
Alignment
Query 1 ATGATTGAAGATAGTGGGAAAAGAGGAAATACCATGGCAGAAAGAAGACAGCTGTTTGCAGAGATGAGGGCTCA 74
|||||||||||||||||.|||||||||||.||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGATTGAAGATAGTGGAAAAAGAGGAAACACCATGGCAGAAAGAAGACAGCTGTTTGCAGAGATGAGGGCTCA 74
Query 75 AGATCTGGATCGCATCCGACTCTCCACCTACAGAACAGCATGCAAGCTTAGGTTTGTTCAGAAGAAATGCAATT 148
||||||||||||||||||||||||||||||||||||||||||||||||.||.|||||.||||||||||||||||
Sbjct 75 AGATCTGGATCGCATCCGACTCTCCACCTACAGAACAGCATGCAAGCTGAGATTTGTGCAGAAGAAATGCAATT 148
Query 149 TGCACCTGGTGGACATATGGAATGTCATAGAAGCATTGCGGGAAAATGCTCTGAACAACCTGGACCCAAACACT 222
||||||||||||||||.|||||.|||||.|||||||||||.|||||.|||.||||.||||||||||||||||..
Sbjct 149 TGCACCTGGTGGACATTTGGAACGTCATTGAAGCATTGCGCGAAAACGCTTTGAATAACCTGGACCCAAACATA 222
Query 223 GAACTCAACGTGTCCCGCTTAGAGGCTGTGCTCTCCACTATTTTTTACCAGCTCAACAAACGGATGCCAACCAC 296
||||||||||||.|||||.|.|||||.||||||||||||||||||||||||||||||||..|||||||||||||
Sbjct 223 GAACTCAACGTGGCCCGCCTGGAGGCGGTGCTCTCCACTATTTTTTACCAGCTCAACAAGAGGATGCCAACCAC 296
Query 297 TCACCAAATCCATGTGGAGCAGTCCATCAGCCTCCTCCTTAACTTCCTGCTTGCAGCGTTTGATCCGGAAGGCC 370
||||||||||||.|||||||||||||||||.|||||.||.|||||||||||.|||||.|||||.||||||||||
Sbjct 297 TCACCAAATCCACGTGGAGCAGTCCATCAGTCTCCTGCTGAACTTCCTGCTCGCAGCCTTTGACCCGGAAGGCC 370
Query 371 ATGGTAAAATTTCAGTATTTGCTGTCAAAATGGCTTTAGCCACATTGTGTGGAGGGAAGATCATGGACAAATTA 444
||||.|||||.||||||||||||||||||||||||||.||.||||||||||||||.||||||||||||||.|||
Sbjct 371 ATGGAAAAATCTCAGTATTTGCTGTCAAAATGGCTTTGGCTACATTGTGTGGAGGAAAGATCATGGACAAGTTA 444
Query 445 AGATATATTTTCTCAATGATTTCTGACTCCAGTGGGGTGATGGTTTATGGACGATATGACCAATTCCTTCGGGA 518
||||||||||||||||||||.||||||||||||||.||||||||.||||||.||||||||||||||||||||||
Sbjct 445 AGATATATTTTCTCAATGATCTCTGACTCCAGTGGAGTGATGGTATATGGAAGATATGACCAATTCCTTCGGGA 518
Query 519 AGTTCTCAAACTACCCACGGCAGTTTTTGAAGGTCCTTCATTTGGTTACACAGAACAGTCAGCCAGATCCTGTT 592
||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AGTTCTCAAACTACCCACAGCAGTTTTTGAAGGTCCTTCATTTGGTTACACAGAACAGTCAGCCAGATCCTGTT 592
Query 593 TCTCCCAACAGAAAAAAGTCACGTTAAATGGTTTCTTGGACACGCTTATGTCAGATCCTCCCCCGCAGTGTCTG 666
||||||||||||||||.|||||.||||||||.||||||||||||||.||||||||.|||||.||.|||||.|||
Sbjct 593 TCTCCCAACAGAAAAAGGTCACCTTAAATGGCTTCTTGGACACGCTCATGTCAGACCCTCCTCCACAGTGCCTG 666
Query 667 GTCTGGTTGCCTCTTCTGCATCGACTAGCAAATGTGGAAAATGTCTTCCATCCGGTTGAGTGTTCCTACTGCCA 740
||.|||.|||||||||||||.|||||.||||||||.|||||||||||||||||.|||||||||||||||||.||
Sbjct 667 GTATGGCTGCCTCTTCTGCACCGACTGGCAAATGTAGAAAATGTCTTCCATCCAGTTGAGTGTTCCTACTGTCA 740
Query 741 CAGTGAGAGTATGATGGGATTTCGCTACCGATGCCAACAGTGTCACAATTACCAGCTCTGTCAGGACTGCTTCT 814
|||||||||.||||||||||||||.||||||||.||||||||||||||.||||||||.||.|||||||||||||
Sbjct 741 CAGTGAGAGCATGATGGGATTTCGATACCGATGTCAACAGTGTCACAACTACCAGCTTTGCCAGGACTGCTTCT 814
Query 815 GGAGGGGACATGCCGGTGGTTCTCATAGCAACCAGCACCAAATGAAAGAGTACACGTCATGGAAATCACCTGCT 888
|||||||.|||||.||.|||||||||||||||||||||||||||||.|||||.|||||.|||||||||||||||
Sbjct 815 GGAGGGGCCATGCAGGAGGTTCTCATAGCAACCAGCACCAAATGAAGGAGTATACGTCGTGGAAATCACCTGCT 888
Query 889 AAGAAGCTGACTAATGCATTAAGCAAGTCCCTGAGCTGTGCTTCCAGCCGTGAACCTTTGCACCCCATGTTCCC 962
||||||||.||.||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||
Sbjct 889 AAGAAGCTAACGAATGCATTAAGCAAGTCCCTGAGCTGTGCTTCAAGCCGTGAACCTTTGCACCCCATGTTCCC 962
Query 963 AGATCAGCCTGAGAAGCCACTCAACTTGGCTCACATCGT---------GCCTCCCAGACCTGTAACCAGCATGA 1027
|||.||||||||.|||||||||||||||||||||||||| ||||||.|||||||||||||||||||
Sbjct 963 AGACCAGCCTGAAAAGCCACTCAACTTGGCTCACATCGTTGATACTTGGCCTCCGAGACCTGTAACCAGCATGA 1036
Query 1028 ACGACACCCTGTTCTCCCACTCTGTTCCCTCCTCAGGAAGTCCTTTTATTACCAGGAGCTC---------GGAC 1092
|||||||.||.||.||||||||||||||||||||||||||||||||.||.||||||||||| ||||
Sbjct 1037 ACGACACACTCTTTTCCCACTCTGTTCCCTCCTCAGGAAGTCCTTTCATCACCAGGAGCTCTCCTCCCAAGGAC 1110
Query 1093 GGTGCTTT--------------TGGTGGATGCGTC--------------------------------------- 1113
.|||...| ||.|||.|..|.|
Sbjct 1111 AGTGAAGTAGAACAGAACAAAATGCTGGCTAGGGCTGCTCCCGCCTTTCTGAAGGGCAGAGGGATACAGTACAG 1184
Query 1114 -------------------------------------------------------------------------- 1113
Sbjct 1185 CCTGAATGTGGCAGACAGGCTAGCTGATGAACATGTTCTCATTGGGTTGTATGTCAACATGCTCCGGAACAACC 1258
Query 1114 -------------------------------------------------------------------------- 1113
Sbjct 1259 CACCATGTATGCTTGAGAGTTCAAACCGGCTTGATGAAGAACACAGGCTGATCGCCAGGTACGCCGCACGACTG 1332
Query 1114 -------------------------------------------------------------------------- 1113
Sbjct 1333 GCAGCAGAATCCTCCTCATCACAGCCCACACAGCAGAGGAGTGCCCCTGACATCTCCTTCACCATCGATGCAAA 1406
Query 1114 -------------------------------------------------------------------------- 1113
Sbjct 1407 TAAACAGCAAAGGCAGCTGATTGCAGAGCTAGAGAACAAGAACAGAGAAATCTTACAAGAGATTCAGAGACTTC 1480
Query 1114 -------------------------------------------------------------------------- 1113
Sbjct 1481 GGGTAGAACATGAGCAAGCTTCCCAGCCCACGCCAGAGAAAGCTCAGCAGAACCCAACCTTGCTGGCAGAACTC 1554
Query 1114 -------------------------------------------------------------------------- 1113
Sbjct 1555 CGGCTCCTCAGACAGCGAAAGGATGAGCTAGAACAGAGAATGTCTGCTCTCCAGGAGAGCCGGAGAGAGCTGAT 1628
Query 1114 -------------------------------------------------------------------------- 1113
Sbjct 1629 GGTCCAGTTGGAAGGTCTCATGAAGCTCCTGAAGACCCAGGGGGCAAGCTCCCCACGCTCTTCCCCCAGCCACA 1702
Query 1114 -------------------------------------------------------------------------- 1113
Sbjct 1703 CCATCAGCAGGCCGATCCCCATGCCCATCCGTTCAGCATCTGCCTGTCCCACACCAACGCACACCCCGCAGGAC 1776
Query 1114 -------------------------------------------------------------------------- 1113
Sbjct 1777 TCCCTCACTGGGGTAGGCGGAGATGTGCAAGAGGCGTTTGCACAAAGTTCGAGAAGGAATCTAAGGAGTGACCT 1850
Query 1114 -------------------------------------------------------------------------- 1113
Sbjct 1851 GCTGGTGGCTGCAGACTCCATCACCAATACCATGTCCTCTCTGGTGAAGGAGCTGAATTCAGAGGTGGCGAGTG 1924
Query 1114 -------------------------------------------------------------------------- 1113
Sbjct 1925 AAACAGAAAGTACTGTGGATTCCGAGTTCTCGAGACCTCAGTTTGAGGATCTGGCTCCATCACCGACCTCTGAG 1998
Query 1114 -------------------------------------------------------------------------- 1113
Sbjct 1999 AAGGCTTTTCTAGCCCAAATCCACTCCCGGAAACCTGGGTACATTCACGGTGGAGCTGCAAGTACCACGCATGG 2072
Query 1114 -------------------------------------------------------------------------- 1113
Sbjct 2073 TGACATGGTCCCGGAAGATGGGGATCCTTACACGCAACCCGAGGATGGCAATTATGAGAACGAGTCTGTGCGGC 2146
Query 1114 -------------------------------------------------------------------------- 1113
Sbjct 2147 AGCTGGAGAATGAGCTGCAGCTGGAGGAGTACCTGAAGCAGAAGCTGCAGGACGAGGCCTACCAGGTCAGCTTG 2220
Query 1114 ------ 1113
Sbjct 2221 CAAGGT 2226