Nucleotide Global Alignment
Description
- Query:
- TRCN0000474295
- Subject:
- XM_011246833.1
- Aligned Length:
- 2141
- Identities:
- 1031
- Gaps:
- 1030
Alignment
Query 1 ATGATTGAAGATAGTGGGAAAAGAGGAAATACCATGGCAGAAAGAAGACAGCTGTTTGCAGAGATGAGGGCTCA 74
|||||||||||||||||.|||||||||||.||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGATTGAAGATAGTGGAAAAAGAGGAAACACCATGGCAGAAAGAAGACAGCTGTTTGCAGAGATGAGGGCTCA 74
Query 75 AGATCTGGATCGCATCCGACTCTCCACCTACAGAACAGCATGCAAGCTTAGGTTTGTTCAGAAGAAATGCAATT 148
||||||||||||||||||||||||||||||||||||||||||||||||.||.|||||.||||||||||||||||
Sbjct 75 AGATCTGGATCGCATCCGACTCTCCACCTACAGAACAGCATGCAAGCTGAGATTTGTGCAGAAGAAATGCAATT 148
Query 149 TGCACCTGGTGGACATATGGAATGTCATAGAAGCATTGCGGGAAAATGCTCTGAACAACCTGGACCCAAACACT 222
||||||||||||||||.|||||.|||||.|||||||||||.|||||.|||.||||.||||||||||||||||..
Sbjct 149 TGCACCTGGTGGACATTTGGAACGTCATTGAAGCATTGCGCGAAAACGCTTTGAATAACCTGGACCCAAACATA 222
Query 223 GAACTCAACGTGTCCCGCTTAGAGGCTGTGCTCTCCACTATTTTTTACCAGCTCAACAAACGGATGCCAACCAC 296
||||||||||||.|||||.|.|||||.||||||||||||||||||||||||||||||||..|||||||||||||
Sbjct 223 GAACTCAACGTGGCCCGCCTGGAGGCGGTGCTCTCCACTATTTTTTACCAGCTCAACAAGAGGATGCCAACCAC 296
Query 297 TCACCAAATCCATGTGGAGCAGTCCATCAGCCTCCTCCTTAACTTCCTGCTTGCAGCGTTTGATCCGGAAGGCC 370
||||||||||||.|||||||||||||||||.|||||.||.|||||||||||.|||||.|||||.||||||||||
Sbjct 297 TCACCAAATCCACGTGGAGCAGTCCATCAGTCTCCTGCTGAACTTCCTGCTCGCAGCCTTTGACCCGGAAGGCC 370
Query 371 ATGGTAAAATTTCAGTATTTGCTGTCAAAATGGCTTTAGCCACATTGTGTGGAGGGAAGATCATGGACAAATTA 444
||||.|||||.||||||||||||||||||||||||||.||.||||||||||||||.||||||||||||||.|||
Sbjct 371 ATGGAAAAATCTCAGTATTTGCTGTCAAAATGGCTTTGGCTACATTGTGTGGAGGAAAGATCATGGACAAGTTA 444
Query 445 AGATATATTTTCTCAATGATTTCTGACTCCAGTGGGGTGATGGTTTATGGACGATATGACCAATTCCTTCGGGA 518
||||||||||||||||||||.||||||||||||||.||||||||.||||||.||||||||||||||||||||||
Sbjct 445 AGATATATTTTCTCAATGATCTCTGACTCCAGTGGAGTGATGGTATATGGAAGATATGACCAATTCCTTCGGGA 518
Query 519 AGTTCTCAAACTACCCACGGCAGTTTTTGAAGGTCCTTCATTTGGTTACACAGAACAGTCAGCCAGATCCTGTT 592
||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AGTTCTCAAACTACCCACAGCAGTTTTTGAAGGTCCTTCATTTGGTTACACAGAACAGTCAGCCAGATCCTGTT 592
Query 593 TCTCCCAACAGAAAAAAGTCACGTTAAATGGTTTCTTGGACACGCTTATGTCAGATCCTCCCCCGCAGTGTCTG 666
||||||||||||||||.|||||.||||||||.||||||||||||||.||||||||.|||||.||.|||||.|||
Sbjct 593 TCTCCCAACAGAAAAAGGTCACCTTAAATGGCTTCTTGGACACGCTCATGTCAGACCCTCCTCCACAGTGCCTG 666
Query 667 GTCTGGTTGCCTCTTCTGCATCGACTAGCAAATGTGGAAAATGTCTTCCATCCGGTTGAGTGTTCCTACTGCCA 740
||.|||.|||||||||||||.|||||.||||||||.|||||||||||||||||.|||||||||||||||||.||
Sbjct 667 GTATGGCTGCCTCTTCTGCACCGACTGGCAAATGTAGAAAATGTCTTCCATCCAGTTGAGTGTTCCTACTGTCA 740
Query 741 CAGTGAGAGTATGATGGGATTTCGCTACCGATGCCAACAGTGTCACAATTACCAGCTCTGTCAGGACTGCTTCT 814
|||||||||.||||||||||||||.||||||||.||||||||||||||.||||||||.||.|||||||||||||
Sbjct 741 CAGTGAGAGCATGATGGGATTTCGATACCGATGTCAACAGTGTCACAACTACCAGCTTTGCCAGGACTGCTTCT 814
Query 815 GGAGGGGACATGCCGGTGGTTCTCATAGCAACCAGCACCAAATGAAAGAGTACACGTCATGGAAATCACCTGCT 888
|||||||.|||||.||.|||||||||||||||||||||||||||||.|||||.|||||.|||||||||||||||
Sbjct 815 GGAGGGGCCATGCAGGAGGTTCTCATAGCAACCAGCACCAAATGAAGGAGTATACGTCGTGGAAATCACCTGCT 888
Query 889 AAGAAGCTGACTAATGCATTAAGCAAGTCCCTGAGCTGTGCTTCCAGCCGTGAACCTTTGCACCCCATGTTCCC 962
||||||||.||.||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||
Sbjct 889 AAGAAGCTAACGAATGCATTAAGCAAGTCCCTGAGCTGTGCTTCAAGCCGTGAACCTTTGCACCCCATGTTCCC 962
Query 963 AGATCAGCCTGAGAAGCCACTCAACTTGGCTCACATCGTGCCTCCCAGACCTGTAACCAGCATGAACGACACCC 1036
|||.||||||||.||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||.|
Sbjct 963 AGACCAGCCTGAAAAGCCACTCAACTTGGCTCACATCGTGCCTCCGAGACCTGTAACCAGCATGAACGACACAC 1036
Query 1037 TGTTCTCCCACTCTGTTCCCTCCTCAGGAAGTCCTTTTATTACCAGGAG-------------CT--------CG 1089
|.||.||||||||||||||||||||||||||||||||.||.|||||||| || |.
Sbjct 1037 TCTTTTCCCACTCTGTTCCCTCCTCAGGAAGTCCTTTCATCACCAGGAGGATACAGTACAGCCTGAATGTGGCA 1110
Query 1090 GACGGTGCT--------------------TTTGGTGG---------ATGCGTC--------------------- 1113
|||.| ||| ||.|||.| |||| ||
Sbjct 1111 GACAG-GCTAGCTGATGAACATGTTCTCATTGGGTTGTATGTCAACATGC-TCCGGAACAACCCACCATGTATG 1182
Query 1114 -------------------------------------------------------------------------- 1113
Sbjct 1183 CTTGAGAGTTCAAACCGGCTTGATGAAGAACACAGGCTGATCGCCAGGTACGCCGCACGACTGGCAGCAGAATC 1256
Query 1114 -------------------------------------------------------------------------- 1113
Sbjct 1257 CTCCTCATCACAGCCCACACAGCAGAGGAGTGCCCCTGACATCTCCTTCACCATCGATGCAAATAAACAGCAAA 1330
Query 1114 -------------------------------------------------------------------------- 1113
Sbjct 1331 GGCAGCTGATTGCAGAGCTAGAGAACAAGAACAGAGAAATCTTACAAGAGATTCAGAGACTTCGGGTAGAACAT 1404
Query 1114 -------------------------------------------------------------------------- 1113
Sbjct 1405 GAGCAAGCTTCCCAGCCCACGCCAGAGAAAGCTCAGCAGAACCCAACCTTGCTGGCAGAACTCCGGCTCCTCAG 1478
Query 1114 -------------------------------------------------------------------------- 1113
Sbjct 1479 ACAGCGAAAGGATGAGCTAGAACAGAGAATGTCTGCTCTCCAGGAGAGCCGGAGAGAGCTGATGGTCCAGTTGG 1552
Query 1114 -------------------------------------------------------------------------- 1113
Sbjct 1553 AAGGTCTCATGAAGCTCCTGAAGACCCAGGGGGCAAGCTCCCCACGCTCTTCCCCCAGCCACACCATCAGCAGG 1626
Query 1114 -------------------------------------------------------------------------- 1113
Sbjct 1627 CCGATCCCCATGCCCATCCGTTCAGCATCTGCCTGTCCCACACCAACGCACACCCCGCAGGACTCCCTCACTGG 1700
Query 1114 -------------------------------------------------------------------------- 1113
Sbjct 1701 GGTAGGCGGAGATGTGCAAGAGGCGTTTGCACAAAGTTCGAGAAGGAATCTAAGGAGTGACCTGCTGGTGGCTG 1774
Query 1114 -------------------------------------------------------------------------- 1113
Sbjct 1775 CAGACTCCATCACCAATACCATGTCCTCTCTGGTGAAGGAGCTGAATTCAGAGGTGGCGAGTGAAACAGAAAGT 1848
Query 1114 -------------------------------------------------------------------------- 1113
Sbjct 1849 ACTGTGGATTCCGAGTTCTCGAGACCTCAGTTTGAGGATCTGGCTCCATCACCGACCTCTGAGAAGGCTTTTCT 1922
Query 1114 -------------------------------------------------------------------------- 1113
Sbjct 1923 AGCCCAAATCCACTCCCGGAAACCTGGGTACATTCACGGTGGAGCTGCAAGTACCACGCATGGTGACATGGTCC 1996
Query 1114 -------------------------------------------------------------------------- 1113
Sbjct 1997 CGGAAGATGGGGATCCTTACACGCAACCCGAGGATGGCAATTATGAGAACGAGTCTGTGCGGCAGCTGGAGAAT 2070
Query 1114 --------------------------------------------------------------------- 1113
Sbjct 2071 GAGCTGCAGCTGGAGGAGTACCTGAAGCAGAAGCTGCAGGACGAGGCCTACCAGGTCAGCTTGCAAGGT 2139
