Nucleotide Global Alignment

Description

Query:
TRCN0000474301
Subject:
NR_040584.2
Aligned Length:
1922
Identities:
325
Gaps:
1568

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCACACCGGACTGCGTTTTTTTTTTCCGAACGCCCGCAGCAGGGTCAGAAGGGAGGTGGTCGCCCTCCGTCGTG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GTCTGGCGTGTATTCCGAGCGTTGGTGTCTGGCGGTTTCCGAGCGTTGGTGTCTGGCGGTTTCTGACCGTTGGT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GTCTGGCGGTTTCCGACCGTTGGTGTCTGGCACGCGCCACCCTCTCTTGCTTTGGTTGCGCCATGCCGATGTAC  222

Query    1  -------------------ATGATCTT---------TTCAAT-GCTG--------CGAAAGCTGCCAAAAGTGA  37
                               ||||| ||         |||||| ||.|        .||||||.||  |||..||
Sbjct  223  CAGACAAGAAGACAAGAAAATGAT-TTGAGGACAGCTTCAATCGCGGTGTGAAGAAGAAAGCAGC--AAAACGA  293

Query   38  CATGCAGGGATGTCCTTCCTGAGATCCGTGC-----------TATCTGCATTGAGGAAATTGGGTGTTGGATGC  100
            |   ||            ||||.|.|...||           ||||  ||   |.||||         ||.|.|
Sbjct  294  C---CA------------CTGAAAACAACGCCGGTGGCAAAATATC--CA---AAGAAA---------GGGTCC  338

Query  101  AAAGC--TACAGCACGTCTTTCC---------TCA---CCGACAGC------TATTTAAAATATATTGGTT--G  152
            .||||  ||||  .||||.|..|         |||   ||..||||      |||||..|||      |.|  |
Sbjct  339  CAAGCGGTACA--TCGTCATAGCCGGAAACAGTCAGAGCCACCAGCCAATGATATTTTCAAT------GCTGCG  404

Query  153  GACTCTGC-----ATGATA---AGCACCGAGAAGTCCGCGTGAAGTGCGTGAAGGCTCTGAAAGGGCTGTACGG  218
            .|..||||     .|||.|   ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  405  AAAGCTGCCAAAAGTGACATGCAGCACCGAGAAGTCCGCGTGAAGTGCGTGAAGGCTCTGAAAGGGCTGTACGG  478

Query  219  TAACCGGGACCTGACCGCACGCCTGGAGCTCTTCACTGGCCGCTTCAAGGACTGGATGGTTTCCATGATCATGG  292
            ||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||.|||
Sbjct  479  TAACCGGGACCTGACCGCACGC--------CTTCACTGGCCGCTTCAAGGACTGGATGGTTTCCATGATCGTGG  544

Query  293  ACAGAGAGTACAGTGTGGCAGTGGAGGCCGTCAGATTACTGATACTTATCCTTAAGAACATGGAAGGGGTGCTG  366
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  545  ACAGAGAGTACAGTGTGGCAGTGGAGGCCGTCAGATTACTGATACTTATCCTTAAGAACATGGAAGGGGTGCTG  618

Query  367  ATGGACGTGGACTGTGAGAGCGTCTACCCCATTGTG--------------------------------------  402
            ||||||||||||||||||||||||||||||||||||                                      
Sbjct  619  ATGGACGTGGACTGTGAGAGCGTCTACCCCATTGTGTAGGCCTCTAATTGAGGCCTGGCCTCTGCTGTGGGTGA  692

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct  693  ATTTCTGTACTGGAAACTTTTCTACCCTGAGTGCGAGATAAGAACGATGGGTGGAAGAGAGCAACGCCAGAGCC  766

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct  767  CAGGCGCCCAGAGGACTTTCTTCCAGCTTCTGCTGTCCTTCTTTGTGGAGAGCAAGCTCCACGACCACGCTGCT  840

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct  841  TACTTAGTAGACAACCTGTGGGACTGTGCAGGGACTCAGCTGAAGGACTGGGAGGGTCTGACAAGCCTGCTGCT  914

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct  915  GGAGAAGGACCAGAGCACGTGCCACATGGAGCCAGGGCCAGGGACCTTCCACCTCCTAGGGTGAAACCAGGAGA  988

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct  989  GATTGCTTGCTTCACTTGTACAAGGCAGGAACGGTGGCATGGGGTGGGGGAAACTTGGAGTTGGAAGGTGGCTA  1062

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1063  ATCTTTGATTCTATGTTTTTGATCCTCCTGGCACTCCAGACCTGGGTGATGTGCAGGAGAGCACACTGATAGAA  1136

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1137  ATCCTTGTGTCCAGTGCCCAGCAACTCCTGCCTCAGCCTCCCGAGCAGCTGGGACTACAGGTGCCCGCCACCAC  1210

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1211  GCCCGGCTAACTTTTTTGTATTTTTAGTAGAGACGGGTTTTCACCGTGTTAGCCAGGATGGTCTTGATCTCTTG  1284

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1285  ACCTTGTGATCCACCTGCCTCATCATCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGCGCCCAGCATGTTA  1358

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1359  GACAATTTTTAATTCATCCTCTCTGTGCTGTTGTTTTCTCAGCTGTGAAAGGAATATTCTGGTGGGGACAAGGT  1432

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1433  TACAGAGTTGCTGAGAGGGTCTCATGACATGAAGGTACTGGCCTTGGCACAGTGCCTGGGGGGGCGGGGACTCC  1506

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1507  GCACATGCCTGTGATGTCACAGTTACTGTCAGTTCACAGCGAACCTTCCCTCCTTTTCCTGTTGACTTTCCCAC  1580

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1581  ACTCCTGTAACCGTCCCTCCCTCCCTTCTTCCTCTCTCTCTCACTCACGCACACGCACACACACACACACACAC  1654

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1655  TCCATTCACTGTCTCCATGACTCTGGAGTAAACTAACGTCTCGAGTTGCCATTGGAAGCCCCATTGTCCTCATT  1728

Query  403  --------------------------------------------------------------------------  402
                                                                                      
Sbjct 1729  TTGTTTTGTTTTGTTTGTTTGAGACGGGGTCTCGCTCTGTCCCCCAGGCTGGAGTGCAGTGGTGCGATCTCAGC  1802

Query  403  ------------------------------------------------------------------------  402
                                                                                    
Sbjct 1803  CCACTGCAGCCTCTGCCTCCTAGGTTCAAGCGATTCTCCTGCCTCACCCTCCTGAGAAGCTGTGATCATAGG  1874

GPP Web Portal Terms of Service

Effective Date: December 8, 2025
By using this site, you agree to our terms and conditions below.

Overview of Terms

The data made available on this website were generated for research purposes and are not intended for clinical or commercial uses. Commercial use (or other use for profit-making purposes) of the GPP Web Portal and its tools, is not permitted under these terms and may require a separate license agreement from Broad or its contributors. For more information, please contact partnering@broadinstitute.org.

The original data may be subject to rights claimed by third parties, including but not limited to, patent, copyright, other intellectual property rights, biodiversity-related access and benefit-sharing rights. It is the responsibility of users of Broad Institute services to ensure that their use of the data does not infringe any of the rights of such third parties.

Any questions or comments concerning these Terms of Use can be addressed to: legal@broadinstitute.org.

By accessing and viewing this GPP Web Portal, you agree to the following terms and conditions:

Attribution

You agree to acknowledge the Broad Institute (e.g., in publications, services or products) for any of your use of its online services, databases or software in accordance with good scientific practice. You agree to use the acknowledgment wording provided for the relevant tools as indicated on the FAQ for each tool.

Updating the Terms of Use

We reserve the right to update these Terms of Use at any time. When alterations are inevitable, we will attempt to give reasonable notice of any changes by placing a notice on our website, but you may wish to check each time you use the website. The date of the most recent revision will appear on this, the "GPP Web Portal Terms of Use" page. If you do not agree to these changes, please do not continue to use our online services. We will also make available an archived copy of the previous Terms of Use for comparison.

Indemnification and Disclaimer of Warranties

You are using this GPP Web Portal at your own risk, and you hereby agree to hold Broad and its contributors and their trustees, directors, officers, employees, and affiliated investigators harmless for any third party claims which may arise from your use of the GPP Web Portal, the tools available therein, or any portion thereof. Further, you agree to indemnify Broad, its contributors, and its and their trustees, directors, officers, employees, affiliated investigators, students, and affiliates for any loss, costs, claims, damages, or other liabilities arising from any unpermitted commercial or profit-making use you make of the GPP Web Portal. The GPP Web Portal is a research tool and is provided "as is". Broad does not represent that the GPP Web Portal is free of errors or bugs or suitable for any particular tasks.

ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, NONINFRINGEMENT, OR THE ABSENCE OF LATENT OR OTHER DEFECTS ARE DISCLAIMED. IN NO EVENT SHALL BROAD OR ITS CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THE GPP WEB PORTAL, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

Governing Law

The terms and conditions herein shall be construed, governed, interpreted, and applied in accordance with the internal laws of the Commonwealth of Massachusetts, U.S.A. Furthermore, by accessing, downloading, or using the Database, You consent to the personal jurisdiction of, and venue in, the state and federal courts within Massachusetts with respect to Your download or use of the Database.