Nucleotide Global Alignment
Description
- Query:
- TRCN0000474301
- Subject:
- XR_002956447.1
- Aligned Length:
- 4054
- Identities:
- 265
- Gaps:
- 3777
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CAGAAGGGAGGTGGTCGCCCTCCGTCGTGGTCTGGCGTGTATTCCGAGCCTTGGTGTCTGGCGGTTTCCGAGCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTGGTGTCTGGCGGTTTCCGAGCGTTGGTGTCTTGGCGGTTTCCGACCGTTGGTGTCTGGCGGTTTCCGACCGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGGTGTCTGGCACGCGCCACCCTCTCTTGCTTTGGTTGCGCCATGCCGATGTACCAGACAAGAAGACAAGAAAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGATTTGAGGACAGCTTCAATCGCGGTGTGAAGAAGAAAGCAGCAAAACGACCACTGAAAACAACGCCGGTGGC 296
Query 1 --------------------------------------------------------------------ATGATC 6
||||||
Sbjct 297 AAAATATCCAAAGAAAGGGTCCCAAGCGGTACATCGTCATAGCCGGAAACAGTCAGAGCCACCAGCCAATGATC 370
Query 7 TTTTCAATGCTGCGAAAGCTGCCAAAAGTGACATGCAGGGATGTCCTTCCTGAGATCCGTGCTATCTGCATTGA 80
||||||||||||||||||||||||||||||||||||
Sbjct 371 TTTTCAATGCTGCGAAAGCTGCCAAAAGTGACATGC-------------------------------------- 406
Query 81 GGAAATTGGGTGTTGGATGCAAAGCTACAGCACGTCTTTCCTCACCGACAGCTATTTAAAATATATTGGTTGGA 154
Sbjct 407 -------------------------------------------------------------------------- 406
Query 155 CTCTGCATGATAAGCACCGAGAAGTCCGCGTGAAGTGCGTGAAGGCTCTGAAAGGGCTGTACGGTAACCGGGAC 228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 407 ------------AGCACCGAGAAGTCCGCGTGAAGTGCGTGAAGGCTCTGAAAGGGCTGTACGGTAACCGGGAC 468
Query 229 CTGACCGCACGCCTGGAGCTCTTCACTGGCCGCTTCAAGGACTGGATGGTTTCCATGATCATGGACAGAGAGTA 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 469 CTGACCGCACGCCTGGAGCTCTTCACTGGCCGCTTCAAGGACTGGATGGTTTCCATGATCATGGACAGAGAGTA 542
Query 303 CAGTGTGGCAGTGGAGGCCGTCAGATTACTGATACTTATCCTTAAGAA--------------CATG-------- 354
|||||||||||||||||||||||||||||||||||||||||||||.|| ||.|
Sbjct 543 CAGTGTGGCAGTGGAGGCCGTCAGATTACTGATACTTATCCTTAACAAATCGCAGTCTTCTCCAGGCTGACAAG 616
Query 355 --GAAGGG------------GTGC----------TGATGGA-----------CGTGGACTGTGAGAGCGTCT-- 391
|||||| |||| |.|||.| |.||.|...|.|| ||||||
Sbjct 617 GCGAAGGGCATGGCTTCGAAGTGCAAAAGAGTCATCATGAAACATCATGAATCATGAATCATTAG-GCGTCTTC 689
Query 392 -------ACCCCA---------------TTGTG----------------------------------------- 402
.||||| ||.||
Sbjct 690 CCTTCGCTCCCCACTTTTTTTTTTTTTTTTTTGAGACTGAGTCTCGCTCTGTTGCCCAGGCTGGAGTACAGTGG 763
Query 403 -------------------------------------------------------------------------- 402
Sbjct 764 TGCGATCTTGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCGATTCTCCTGCCGTAGCCTCCTGAGTAGCTG 837
Query 403 -------------------------------------------------------------------------- 402
Sbjct 838 GGATTACAGGTCCCCGCCACCACACCTGGCTAATTTTCTTATTTATTTATTTATTTTTAGTAGAGATGGGGTTT 911
Query 403 -------------------------------------------------------------------------- 402
Sbjct 912 TGCCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAGTGATCCACCTGCTTTGGCCTCCCAAAGTGCTGG 985
Query 403 -------------------------------------------------------------------------- 402
Sbjct 986 GATTACAGGCGTAAGCCATTGCACCCAACTCACTCCCCACCTTAAAACCAAAAGCGCTCTGGCTCTCAATGGAG 1059
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1060 ACATCAAGCCCTCCCTGCCCCTTCTCCCTCCCCTTTCAGAGAATCTCCAGGAATTTCTGCCATTGTGCAGGGAG 1133
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1134 CAATTGAAAAATCAGTTAGTTCAGCTGGGTGCAGTGGCTCATGTCTGTAATCCCAGCACTTTGGGAGGCTGAGG 1207
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1208 CGGGCAGATCACCTGAGGCCAGGAGTTGGAGACCAGCCTGGCCAGCACAGTGAAACCCCGTCTCTACTAAAAAT 1281
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1282 ACAAAAAATTAGCCGGGCGTGGTGATGGGCACCTGTAATCCCAGCTACTCTGGAGGCTGAGGCAGGAGAATGGC 1355
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1356 GTGAACCTGGGAGGTGGAGCTTGCAGTGAGCCGAGACTGCAGCATTGCACTCCAGCCTGCGCAACAAGAGTGAA 1429
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1430 ACTGTCTCAAAAAACAAAACAAAACAAAACACAAAAAGAAAGAAAAAAGGAAAAATCAGTTAGTTCGATTATTA 1503
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1504 GAAGACTAGATTATTGCTCAGCAGTAACCACTCCTTTCCCACAAACTCCCCTCTCTAGGAGGAATGTACCTCCC 1577
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1578 CACCCATTCCTGTTAGGCTTGGCCAGGTGAATCGCTTTGGCCAATAGAATGTAACTGACAAGGTGAGCAGAGAT 1651
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1652 TTGCAGTGGGCTTGTGCTTGGTGCTGGTCCTCCGGGGCTCCTGCCTTTAGCCAGGGGAAGCACACTCCCCAGCC 1725
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1726 CCTCCTTAGCCCTCTGGCCCTGGGGAGAATGAGAGGCATGTGGCACAGTCCTGGACCCAGCCGTGGCTGGGAGC 1799
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1800 AAGCCTGGAAGCTTGAGCGAGAGATAAATGCTTGGTCTTTTTGTTTGAGACTAAGTCTCGCTCTATCGCCCAGG 1873
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1874 CTGGAGTGCAGTGTGGCACAATCTCAGCTCATTGCAACCTCCACCTCCCAGGTTCAAGCTATTCTCCTGCTTCA 1947
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1948 GCCTCCCAAGTAGCTGGGACTACAGCCAAATTGGAAGACCCACTTCTCTGGACTGGATGCTGCATTGAATTGAG 2021
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2022 CAAAGGAACTGAGTGCCCGGGGAGCTCAAAGGGAAGCAGCCCAGCCTTCCTTCCGGGGCAGAGCAGTGGTGGGG 2095
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2096 ACCTGTTTCCAGCTGCTTGTGCCCCCCACTTCATGGAGGAGGGACCAGGGATCCTCAGAGGAGAGGGTGATGTT 2169
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2170 TGACAGTGGCTGCCTGCCCTGAAAATCGCCCTTGTCTGTCCAGCCTGGCCTGAATTTCACCCACATCAACCCAC 2243
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2244 ATGGGATACTTTATTTATTTATTTATCTATTTATTTATTTATTTATTTATTTTAGAGCCAGGGTCTCACCCTGT 2317
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2318 GGCCCAGGCTGGAGTGCCGTGGTGCTATCATAGCTCACTGCAGCCTCAAACTCCTGGGCTCAAGTGATCCTCCC 2391
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2392 GCCTCAGCCTCCAGAGTAGCTGGGACTACAGGAACACACCACTGTGCCTGGCTTATTTTTCTTTTTTTTTTTGG 2465
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2466 TAGAGATGGGGGTCTCTCTATGTTGCCCAGGCTGGTCTCAAACTCCTGGCCTCAAGTGATCCTCCTGCCTCGGC 2539
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2540 CTCCCAAAGTACTGGGATTACAGAATCGGCTCCCAGACACCTGCCACTCGTGAATGCATCTGATAAACTCACTC 2613
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2614 ACACTGAGGCCTTGGGGACTGAGAGTGCGATGACATGGATCCTGCGGACAAACCGCCCCAGGGCGTACCTAGCA 2687
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2688 CCGAAGCATCAGGCGCCACTAGGTCTCCAGCTCCTTCTCGGATGACGTCCTTCAGCACGCCCCGGTCCCCCGAG 2761
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2762 ATGTCCAGCATCCTCTGACTTAACCGCTCGTACAGGGACTGATGGAGAATGAAAGCCAGGCCTCAGAGCCGCAG 2835
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2836 ACCCACCCGGCCACCCCTCAGCGTCTACGCCCCCACGTCTGGGCCCTCACCTGGCCGGGGGCGTCGTCCCCTTC 2909
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2910 CAGGACTCCCTGGTTTAACGCGCTTCCCCCCATGTCCTAGCTGCCCTCCCTGTGGCGTGAGCCTTCGGCCTGGT 2983
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2984 GCGCCCCGCTGCCCTTCCTGGCTGTGACTCTGGTGGGGTTCCGAAGGCCCCTTTATGCCCGGCAGACCCCTACC 3057
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3058 GACGGCGGCATTCCATTCTGGGGCCACGAGGAGGCACTCATCGTTTCGTTCCAACCGCCGCCAACGGCCCTGGC 3131
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3132 CCTCGCGAGCTCTGGAACTACAGAGGTCGCACGAGGCTCGCTCTGAGCCCAGGCTGGAGTTCAGTGATGGATCT 3205
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3206 CAGCTCACTGCAGCCGCCACCTCCTGGGCTCAAGAGATCCTCCTGCCTCGGCCTCCCAAGTAGCTGGGATTACA 3279
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3280 GACGTGCACCACCAGGCCCAGCTAATTTATTTTTTAGTTTTTAATTTGCTGGTAAGATGGTTTGTAGCTTTGTT 3353
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3354 GCCTAGGCTGGTCTTGAACTCCTGGCTTCAAGCGATCCTCCAGTCTTGACCTCCCAAAGTGCTGGGATTATAGG 3427
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3428 CGTAGGCTACAGCCAACTTTCAATACTGCCCCATTGGGGGTTACGTTTCCAACACATGAAATTAGGAGGATACA 3501
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3502 TTCAAACCACAGCAGTATATTATGACCATAATATTCATTAACTGTGTAACAGGCTGGGCGCGGTGGCTCACACC 3575
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3576 TGTAATCCCAGCACTTTGGGAGACCAGAGTGGGTAGATCACTCGAGGTCAGGAGTTTGAGACCAGCCTGGCCCA 3649
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3650 CATGATGAAACCGCCTCTCTACTAAAAATACAAAAAATTAGCCGGTGTGGTGGCAGGCGCCTGTAACCTCAGCT 3723
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3724 ACTTGGGAGGCTGAGGCAGGAGAATCACTTGAATCCGGGAGGTGGAGGTGGCAGTGAGCCTGATTGCACCACTG 3797
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3798 CACTCCAGCCTGGGCAACAAGAGCAAAACTCTGTCTCAATAAACAAACAAACAAACAAAACCTGTATAACAGAG 3871
Query 403 ---------------------------------------------------------- 402
Sbjct 3872 TGTCATTGAATTTCTAAACGTTGAAAGACTTCACATTAAAAAAAAACTCACAATTTAA 3929
