Nucleotide Global Alignment
Description
- Query:
- TRCN0000474301
- Subject:
- XR_002956450.1
- Aligned Length:
- 4088
- Identities:
- 266
- Gaps:
- 3813
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACCAGGTAAAGCCCTATCACCGGGTCTGCGCCCCTCTCCGTGTGGAGCCCACCTGCATGTACTGGCTCCCCAAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ATGCACGGCAGGAGCGGCGGCCCAGCACTTGGCACTGGCCACTTGCAGACAAGAAGACAAGAAAATGATTTGAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GACAGCTTCAATCGCGGTGTGAAGAAGAAAGCAGCAAAACGACCACTGAAAACAACGCCGGTGGCAAAATATCC 222
Query 1 -----------------------------------------------------------ATGATCTTTTCAATG 15
|||||||||||||||
Sbjct 223 AAAGAAAGGGTCCCAAGCGGTACATCGTCATAGCCGGAAACAGTCAGAGCCACCAGCCAATGATCTTTTCAATG 296
Query 16 CTGCGAAAGCTGCCAAAAGTGACATGCAGGGATGTCCTTCCTGAGATCCGTGCTATCTGCATTGAGGAAATTGG 89
|||||||||||||||||||||||||||
Sbjct 297 CTGCGAAAGCTGCCAAAAGTGACATGC----------------------------------------------- 323
Query 90 GTGTTGGATGCAAAGCTACAGCACGTCTTTCCTCACCGACAGCTATTTAAAATATATTGGTTGGACTCTGCATG 163
Sbjct 324 -------------------------------------------------------------------------- 323
Query 164 ATAAGCACCGAGAAGTCCGCGTGAAGTGCGTGAAGGCTCTGAAAGGGCTGTACGGTAACCGGGACCTGACCGCA 237
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 324 ---AGCACCGAGAAGTCCGCGTGAAGTGCGTGAAGGCTCTGAAAGGGCTGTACGGTAACCGGGACCTGACCGCA 394
Query 238 CGCCTGGAGCTCTTCACTGGCCGCTTCAAGGACTGGATGGTTTCCATGATCATGGACAGAGAGTACAGTGTGGC 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 395 CGCCTGGAGCTCTTCACTGGCCGCTTCAAGGACTGGATGGTTTCCATGATCATGGACAGAGAGTACAGTGTGGC 468
Query 312 AGTGGAGGCCGTCAGATTACTGATACTTATCCT--------------------------TAAGAAC-----ATG 354
||||||||||||||||||||||||||||||||| ||||||| .||
Sbjct 469 AGTGGAGGCCGTCAGATTACTGATACTTATCCTTAAACTTTTCTACCCTGAGTGCGAGATAAGAACGATGGGTG 542
Query 355 GAAG------------------GGGTG--CTGATGGAC-------------GTGGACTGT-----------GAG 384
|||| .|||| |.|| |||| .|| |||| |||
Sbjct 543 GAAGAGAGCAACGCCAGAGCCCAGGTGCCCAGA-GGACTTTCTTCCAGCTTCTG--CTGTCCTTCTTTGTGGAG 613
Query 385 AGC------------GTCTACCCCATTGTG-------------------------------------------- 402
||| ||||.|.|||...||
Sbjct 614 AGCAAGCAAATCGCAGTCTTCTCCAGGCTGACAAGGCGAAGGGCATGGCTTCGAAGTGCAAAAGAGTCATCATG 687
Query 403 -------------------------------------------------------------------------- 402
Sbjct 688 AAACATCATGAATCATGAATCATTAGGCGTCTTCCCTTCGCTCCCCACTTTTTTTTTTTTTTTTTTGAGACTGA 761
Query 403 -------------------------------------------------------------------------- 402
Sbjct 762 GTCTCGCTCTGTTGCCCAGGCTGGAGTACAGTGGTGCGATCTTGGCTCACTGCAACCTCTGCCTCCTGGGTTCA 835
Query 403 -------------------------------------------------------------------------- 402
Sbjct 836 AGCGATTCTCCTGCCGTAGCCTCCTGAGTAGCTGGGATTACAGGTCCCCGCCACCACACCTGGCTAATTTTCTT 909
Query 403 -------------------------------------------------------------------------- 402
Sbjct 910 ATTTATTTATTTATTTTTAGTAGAGATGGGGTTTTGCCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAA 983
Query 403 -------------------------------------------------------------------------- 402
Sbjct 984 GTGATCCACCTGCTTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTAAGCCATTGCACCCAACTCACTCCCCAC 1057
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1058 CTTAAAACCAAAAGCGCTCTGGCTCTCAATGGAGACATCAAGCCCTCCCTGCCCCTTCTCCCTCCCCTTTCAGA 1131
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1132 GAATCTCCAGGAATTTCTGCCATTGTGCAGGGAGCAATTGAAAAATCAGTTAGTTCAGCTGGGTGCAGTGGCTC 1205
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1206 ATGTCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGCAGATCACCTGAGGCCAGGAGTTGGAGACCAGCCTG 1279
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1280 GCCAGCACAGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGATGGGCACCTGTAATC 1353
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1354 CCAGCTACTCTGGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGGAGGTGGAGCTTGCAGTGAGCCGAGACTGC 1427
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1428 AGCATTGCACTCCAGCCTGCGCAACAAGAGTGAAACTGTCTCAAAAAACAAAACAAAACAAAACACAAAAAGAA 1501
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1502 AGAAAAAAGGAAAAATCAGTTAGTTCGATTATTAGAAGACTAGATTATTGCTCAGCAGTAACCACTCCTTTCCC 1575
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1576 ACAAACTCCCCTCTCTAGGAGGAATGTACCTCCCCACCCATTCCTGTTAGGCTTGGCCAGGTGAATCGCTTTGG 1649
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1650 CCAATAGAATGTAACTGACAAGGTGAGCAGAGATTTGCAGTGGGCTTGTGCTTGGTGCTGGTCCTCCGGGGCTC 1723
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1724 CTGCCTTTAGCCAGGGGAAGCACACTCCCCAGCCCCTCCTTAGCCCTCTGGCCCTGGGGAGAATGAGAGGCATG 1797
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1798 TGGCACAGTCCTGGACCCAGCCGTGGCTGGGAGCAAGCCTGGAAGCTTGAGCGAGAGATAAATGCTTGGTCTTT 1871
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1872 TTGTTTGAGACTAAGTCTCGCTCTATCGCCCAGGCTGGAGTGCAGTGTGGCACAATCTCAGCTCATTGCAACCT 1945
Query 403 -------------------------------------------------------------------------- 402
Sbjct 1946 CCACCTCCCAGGTTCAAGCTATTCTCCTGCTTCAGCCTCCCAAGTAGCTGGGACTACAGCCAAATTGGAAGACC 2019
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2020 CACTTCTCTGGACTGGATGCTGCATTGAATTGAGCAAAGGAACTGAGTGCCCGGGGAGCTCAAAGGGAAGCAGC 2093
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2094 CCAGCCTTCCTTCCGGGGCAGAGCAGTGGTGGGGACCTGTTTCCAGCTGCTTGTGCCCCCCACTTCATGGAGGA 2167
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2168 GGGACCAGGGATCCTCAGAGGAGAGGGTGATGTTTGACAGTGGCTGCCTGCCCTGAAAATCGCCCTTGTCTGTC 2241
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2242 CAGCCTGGCCTGAATTTCACCCACATCAACCCACATGGGATACTTTATTTATTTATTTATCTATTTATTTATTT 2315
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2316 ATTTATTTATTTTAGAGCCAGGGTCTCACCCTGTGGCCCAGGCTGGAGTGCCGTGGTGCTATCATAGCTCACTG 2389
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2390 CAGCCTCAAACTCCTGGGCTCAAGTGATCCTCCCGCCTCAGCCTCCAGAGTAGCTGGGACTACAGGAACACACC 2463
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2464 ACTGTGCCTGGCTTATTTTTCTTTTTTTTTTTGGTAGAGATGGGGGTCTCTCTATGTTGCCCAGGCTGGTCTCA 2537
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2538 AACTCCTGGCCTCAAGTGATCCTCCTGCCTCGGCCTCCCAAAGTACTGGGATTACAGAATCGGCTCCCAGACAC 2611
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2612 CTGCCACTCGTGAATGCATCTGATAAACTCACTCACACTGAGGCCTTGGGGACTGAGAGTGCGATGACATGGAT 2685
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2686 CCTGCGGACAAACCGCCCCAGGGCGTACCTAGCACCGAAGCATCAGGCGCCACTAGGTCTCCAGCTCCTTCTCG 2759
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2760 GATGACGTCCTTCAGCACGCCCCGGTCCCCCGAGATGTCCAGCATCCTCTGACTTAACCGCTCGTACAGGGACT 2833
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2834 GATGGAGAATGAAAGCCAGGCCTCAGAGCCGCAGACCCACCCGGCCACCCCTCAGCGTCTACGCCCCCACGTCT 2907
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2908 GGGCCCTCACCTGGCCGGGGGCGTCGTCCCCTTCCAGGACTCCCTGGTTTAACGCGCTTCCCCCCATGTCCTAG 2981
Query 403 -------------------------------------------------------------------------- 402
Sbjct 2982 CTGCCCTCCCTGTGGCGTGAGCCTTCGGCCTGGTGCGCCCCGCTGCCCTTCCTGGCTGTGACTCTGGTGGGGTT 3055
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3056 CCGAAGGCCCCTTTATGCCCGGCAGACCCCTACCGACGGCGGCATTCCATTCTGGGGCCACGAGGAGGCACTCA 3129
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3130 TCGTTTCGTTCCAACCGCCGCCAACGGCCCTGGCCCTCGCGAGCTCTGGAACTACAGAGGTCGCACGAGGCTCG 3203
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3204 CTCTGAGCCCAGGCTGGAGTTCAGTGATGGATCTCAGCTCACTGCAGCCGCCACCTCCTGGGCTCAAGAGATCC 3277
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3278 TCCTGCCTCGGCCTCCCAAGTAGCTGGGATTACAGACGTGCACCACCAGGCCCAGCTAATTTATTTTTTAGTTT 3351
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3352 TTAATTTGCTGGTAAGATGGTTTGTAGCTTTGTTGCCTAGGCTGGTCTTGAACTCCTGGCTTCAAGCGATCCTC 3425
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3426 CAGTCTTGACCTCCCAAAGTGCTGGGATTATAGGCGTAGGCTACAGCCAACTTTCAATACTGCCCCATTGGGGG 3499
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3500 TTACGTTTCCAACACATGAAATTAGGAGGATACATTCAAACCACAGCAGTATATTATGACCATAATATTCATTA 3573
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3574 ACTGTGTAACAGGCTGGGCGCGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGACCAGAGTGGGTAGATCA 3647
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3648 CTCGAGGTCAGGAGTTTGAGACCAGCCTGGCCCACATGATGAAACCGCCTCTCTACTAAAAATACAAAAAATTA 3721
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3722 GCCGGTGTGGTGGCAGGCGCCTGTAACCTCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAATCCGGGA 3795
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3796 GGTGGAGGTGGCAGTGAGCCTGATTGCACCACTGCACTCCAGCCTGGGCAACAAGAGCAAAACTCTGTCTCAAT 3869
Query 403 -------------------------------------------------------------------------- 402
Sbjct 3870 AAACAAACAAACAAACAAAACCTGTATAACAGAGTGTCATTGAATTTCTAAACGTTGAAAGACTTCACATTAAA 3943
Query 403 ------------------ 402
Sbjct 3944 AAAAAACTCACAATTTAA 3961
