Nucleotide Global Alignment
Description
- Query:
- TRCN0000474324
- Subject:
- NR_136553.2
- Aligned Length:
- 5048
- Identities:
- 1005
- Gaps:
- 4043
Alignment
Query 1 --------------------------ATGGCGGCCTCCTGGTCGCTCTTGGTTACCCTGCGCCCCTTAGCACAG 48
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 CTTCCTCTCCTCGTACGGAGTTCAAGATGGCGGCCTCCTGGTCGCTCTTGGTTACCCTGCGCCCCTTAGCACAG 74
Query 49 AGCCCGCTGAGAGGGAGATGTGTTGGGTGCGGGGCCTGGGCCGCCGCTCTCGCTCCTCTGGCCACCGCCCCTGG 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 AGCCCGCTGAGAGGGAGATGTGTTGGGTGCGGGGCCTGGGCCGCCGCTCTCGCTCCTCTGGCCACCGCCCCTGG 148
Query 123 GAAGCCCTTTTGGAAAGCCTATACGGTTCAGACATCCGAGAGCATGACCCCAACTGCCACTTCAGAGACTTATT 196
|||||||||||||||||
Sbjct 149 GAAGCCCTTTTGGAAAG--------------------------------------------------------- 165
Query 197 TGAAAGCTTTGGCCGTTTGCCATGGACCTCTGGACCACTATGATTTTCTGATCAAAGCTCATGAGCTAAAGGAT 270
Sbjct 166 -------------------------------------------------------------------------- 165
Query 271 GATGAACATCAAAGAAGAGTCATACAGTGTTTGCAGAAATTACACGAGGACCTTAAAGGATACAATATAGAGGC 344
Sbjct 166 -------------------------------------------------------------------------- 165
Query 345 AGAAGGCCTTTTTTCAAAGCTTTTTTCAAGGAGCAAACCTCCAAGGGGCCTGTATGTTTATGGAGATGTTGGTA 418
Sbjct 166 -------------------------------------------------------------------------- 165
Query 419 CAGGAAAAACAATGGTGATGGACATGTTTTATGCTTATGTGGAAATGAAGAGGAAAAAACGGGTTCATTTTCAT 492
Sbjct 166 -------------------------------------------------------------------------- 165
Query 493 GGTTTCATGCTAGATGTGCACAAAAGAATACATCGCCTTAAACAGAGTTTGCCAAAAAGGAAACCAGGATTCAT 566
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 166 -------------------------GAATACATCGCCTTAAACAGAGTTTGCCAAAAAGGAAACCAGGATTCAT 214
Query 567 GGCTAAATCATATGACCCAATAGCTCCCATAGCCGAAGAAATCAGCGAAGAAGCATGTCTCCTATGTTTTGATG 640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 215 GGCTAAATCATATGACCCAATAGCTCCCATAGCCGAAGAAATCAGCGAAGAAGCATGTCTCCTATGTTTTGATG 288
Query 641 AATTTCAGGTCACTGACATTGCTGATGCCATGATTCTGAAACAGCTTTTTGAAAATCTGTTCAAAAACGGGGTC 714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 289 AATTTCAGGTCACTGACATTGCTGATGCCATGATTCTGAAACAGCTTTTTGAAAATCTGTTCAAAAACGGGGTC 362
Query 715 GTCGTTGTGGCAACATCCAACAGGCCACCGGAAGATCTCTATAAAAATGGACTCCAAAGAGCTAACTTTGTACC 788
||||||||||||||||||||||||||||||
Sbjct 363 GTCGTTGTGGCAACATCCAACAGGCCACCG-------------------------------------------- 392
Query 789 ATTCATAGCAGTCTTGAAGGAATATTGTAATACAGTCCAGCTAGATTCTGGGATAGATTACCGGAAAAGGGAAC 862
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 393 ---------------GAAGGAATATTGTAATACAGTCCAGCTAGATTCTGGGATAGATTACCGGAAAAGGGAAC 451
Query 863 TTCCTGCTGCAGGAAAACTCTACTACCTCACAAGTGAAGCTGATGTGGAGGCTGTCATGGATAAGTTGTTTGAT 936
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 452 TTCCTGCTGCAGGAAAACTCTACTACCTCACAAGTGAAGCTGATGTGGAGGCTGTCATGGATAAGTTGTTTGAT 525
Query 937 GAGCTGGCTCAGAAACAAAATGATTTAACTAGACCAAGGATTCTAAAAGTGCAAGGCAGAGAGCTGCGCCTGAA 1010
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 526 GAGCTGGCTCAGAAACAAAATGATTTAACTAGACCAAGGATTCTAAAAGTGCAAGGCAGAGAGCTGCGCCTGAA 599
Query 1011 TAAAGCCTGTGGAACCGTTGCCGACTGCACATTTGAAGAGCTGTGTGAGAGACCACTTGGAGCCAGTGACTATT 1084
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 600 TAAAGCCTGTGGAACCGTTGCCGACTGCACATTTGAAGAGCTGTGTGAGAGACCACTTGGAGCCAGTGACTATT 673
Query 1085 TGGAACTATCAAAGAATTTTGATACAATATTTTTACGAAACATTCCGCAATTTACTCTGGCAAACAGGACTCAA 1158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 674 TGGAACTATCAAAGAATTTTGATACAATATTTTTACGAAACATTCCGCAATTTACTCTGGCAAACAGGACTCAA 747
Query 1159 GGTCGAAGATTCATAACTCTCATCGATAACTTTTATGATCTCAAGGTGCGTATAATTTGCTCTGCGTCGACTCC 1232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 748 GGTCGAAGATTCATAACTCTCATCGATAACTTTTATGATCTCAAGGTGCGTATAATTTGCTCTGCGTCGACTCC 821
Query 1233 TATATCAAGCTTATTTTTGCATCAACATCATGACAGTGAGTTGGAGCAAAGCAGAATACTGATGGATGATTTGG 1306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 822 TATATCAAGCTTATTTTTGCATCAACATCATGACAGTGAGTTGGAGCAAAGCAGAATACTGATGGATGATTTGG 895
Query 1307 GGCTGAGCCAGGATTCAGCAGAAGGACTCTCCATGTTTACCGGAGAAGAGGAAATCTTTGCATTTCAGCGCACA 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 896 GGCTGAGCCAGGATTCAGCAGAAGGACTCTCCATGTTTACCGGAGAAGAGGAAATCTTTGCATTTCAGCGCACA 969
Query 1381 ATTTCCCGACTCACGGAAATGCAGACTGAACAGTACTGGAATGAAGGAGACAGAACCAAGAA------------ 1442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 970 ATTTCCCGACTCACGGAAATGCAGACTGAACAGTACTGGAATGAAGGAGACAGAACCAAGAAGTAACTGCCACT 1043
Query 1443 -------------------------------------------------------------------------- 1442
Sbjct 1044 TTTGCATAAATAAAACTCTAGACAAATGGTTAACGCAGGCAGAACTCCTTATTGTGGGACTTGAAGGAATCATT 1117
Query 1443 -------------------------------------------------------------------------- 1442
Sbjct 1118 TTCTCATCATTAATTATGCACTTTGTCCTCTGGACCATTTTAATCTAAAATTGCTCTCAAGGATCTAGTGGATT 1191
Query 1443 -------------------------------------------------------------------------- 1442
Sbjct 1192 AGTAAGTTAAACACTTAACATTTTTTAGGTCTGCTTTTTCTTATTTGGCCTTATTTCTGCACCATGAAATTAAA 1265
Query 1443 -------------------------------------------------------------------------- 1442
Sbjct 1266 ATCATCTCATTCCTGAAGATGAATGTAGGACCAGACATTTTAGCTTCACATTAAACCACCTGAATGAACCTTGA 1339
Query 1443 -------------------------------------------------------------------------- 1442
Sbjct 1340 ATGCACAAGTAAATGCAAGACGTCTGGATACCTTCAAGCTTTGGCTGCATGGTGGTGGCATGTTAGAAATACAT 1413
Query 1443 -------------------------------------------------------------------------- 1442
Sbjct 1414 CTTTTATAATGGGGGAAGAATGCCCTATGTTTCAATTCAAAACAAAGACAGTTTTCCAATCTGATATAAACTAA 1487
Query 1443 -------------------------------------------------------------------------- 1442
Sbjct 1488 AAGGGATAATATTTTAGAATATGGGCTTATATGTGGTTTTTTTTTTTGGTTATGAATTACAGTAAATCTCCCAG 1561
Query 1443 -------------------------------------------------------------------------- 1442
Sbjct 1562 GCCTTCAGATTTCTACATAATGGAAGAATATGTTTTTAACCCTGAGATCAAGTTTAGTAGGCAGGACTTGATCT 1635
Query 1443 -------------------------------------------------------------------------- 1442
Sbjct 1636 CAAGTGGTCACAAAGTTTTCTAAAAAAAAATAGAAAATTATGATGGGATCAAATAAGGAGCAAGTGTCAAATTC 1709
Query 1443 -------------------------------------------------------------------------- 1442
Sbjct 1710 CAGCCAACAGGCAGATCTGCAGGCAGAGCTACAAACTCTGCAGCCAGGAATGGGGACCAGTGAGAGAGTGTGGG 1783
Query 1443 -------------------------------------------------------------------------- 1442
Sbjct 1784 CGGGGGGGTGGGTGTCAGAGTCGTAGGCACTCCAACAGCAGAGGAGACTCCCGCTCACATGAGGCCAGCCGTAC 1857
Query 1443 -------------------------------------------------------------------------- 1442
Sbjct 1858 CCCAGTGGACAGCAGGCTCCTTCTCACTGTTGTAGACACTTGCTCTCCTTGCAGCATGCTGCCCCCGCCCTTGC 1931
Query 1443 -------------------------------------------------------------------------- 1442
Sbjct 1932 CGCCAACTCTGCCGTGAGATGGACCTAATAGGAAATAGGAAAGAAAGCCTGACAAGCCTGCTTCACAGGAAATC 2005
Query 1443 -------------------------------------------------------------------------- 1442
Sbjct 2006 TGATTTGTCCTTCACTGAGCTCATCTTTTGCTTCTTTGAGTAAAACCTGGCTTTACTAACTATTGTCACAAAGT 2079
Query 1443 -------------------------------------------------------------------------- 1442
Sbjct 2080 GGATCTTCGGCTGTGGATGAGTGTGAAAAACAGAAAAAATATAAAATCCACAAAATCTTGTGAAAATTAAGCAT 2153
Query 1443 -------------------------------------------------------------------------- 1442
Sbjct 2154 TTGGGGGAAGGTAAGGCATAGGTGAGTCAGTCCAATGAATACAATGGTCAACATAAGTAAGCTCTTTGAACCTA 2227
Query 1443 -------------------------------------------------------------------------- 1442
Sbjct 2228 TTTATTTTCTATTTATTATTATTTTTATTTTTTATATCTTGGCCACTCTAGCCATCTCCTGGCAGGGGTAGTGT 2301
Query 1443 -------------------------------------------------------------------------- 1442
Sbjct 2302 GGCACAGCATGGCCCTATTTAATTTCTTAGTCAATAATCCATCACATAGTCTCTTTTAGATATTAACCTAATTA 2375
Query 1443 -------------------------------------------------------------------------- 1442
Sbjct 2376 AGGCAAGCAGGTAGATGGATGAGTACCCAAGCCGAGAGAAGAGTTTAAATCAAGCCTTCTGTAAATAAAATGTG 2449
Query 1443 -------------------------------------------------------------------------- 1442
Sbjct 2450 GTTTAAAGATATTTTTATTGAAGTGAAACACAGTAATTTCAAAGAGGTTACGTAATAGGGAGAAAGGATGGGAA 2523
Query 1443 -------------------------------------------------------------------------- 1442
Sbjct 2524 ATAACCACTTTGTGCTGGATTGAATGCTATATATTTACATTAGCTCAGTTAAAAAAAATAGTCTTAGAAAGTGA 2597
Query 1443 -------------------------------------------------------------------------- 1442
Sbjct 2598 ATATTATAACCCCTGTTTAAAAATAAGAAAACTGAGTCTTGGGAAAGTTAAGTAGCTTGACCTGAGATTCACAG 2671
Query 1443 -------------------------------------------------------------------------- 1442
Sbjct 2672 TTTACAACTACAAAACTCATATACTATATTTTATAACACACTGTCTCTTACTCTTACTATTTAAAAAAAAGAGA 2745
Query 1443 -------------------------------------------------------------------------- 1442
Sbjct 2746 TTGTTTTAAAAATTGATTCATTTAACTCAGTGAATGAAGTTGAAGATAAATTCACAACAGAACCATTGATTTGA 2819
Query 1443 -------------------------------------------------------------------------- 1442
Sbjct 2820 ACTCAGTGAATATAAAATGTTTAACTTTATTCTTTAGATCTTAGCTTTTTACTTTTCACATTCCTTTGGTAATT 2893
Query 1443 -------------------------------------------------------------------------- 1442
Sbjct 2894 ATTCTGTATCTTAATTTTTAAAAAAATCATGTGAATGGACAGACAGATAGATGGACAGTATGACCGATAGACAG 2967
Query 1443 -------------------------------------------------------------------------- 1442
Sbjct 2968 ACCTGTCCCTGAGTGTGAGTGTATGTAGAAGAGTCCCCCTGTCAAGTTATGTTATAAAAGTTCATCTGAGGTCA 3041
Query 1443 -------------------------------------------------------------------------- 1442
Sbjct 3042 GATATTGGGAATAAAGTTTCATTTTTCCATCGAAACAATCACGTAATGTTAGTTGGGGTGCTGGTCAAACGCAT 3115
Query 1443 -------------------------------------------------------------------------- 1442
Sbjct 3116 AGAAGCCTATGTAATTCTCAGTGTAGCTTCCCTATAATGTCATTTTGGTACGAAAGAACTTAAACCCTGAGAAA 3189
Query 1443 -------------------------------------------------------------------------- 1442
Sbjct 3190 AAAACTGTAGCTCAGTCTCCACCTAAGTAACTGGAGCATGTGCCCACTTCTGTGCCCCCAATCCGCAATCTCCT 3263
Query 1443 -------------------------------------------------------------------------- 1442
Sbjct 3264 TCCCCAGTTCCAGGGGCCTGCTGGGATTGGCTGCAGTGGAAGAGGCTCTTTGAGCTGGGAGAAGGGTTTATGCA 3337
Query 1443 -------------------------------------------------------------------------- 1442
Sbjct 3338 GAAAGTGGGGCTAGAAGGCTTTGGCTGGATCTCTGGAGGGGAGGGAGTTCCATGGTGGCTGGAAATCTCCAAAG 3411
Query 1443 -------------------------------------------------------------------------- 1442
Sbjct 3412 CTGGTTTCATAAAATAGCATGCAAGAAAAAAACCCAAGTCTTCAAGAATAGCCATCACTAGGAAACAGTATGGT 3485
Query 1443 -------------------------------------------------------------------------- 1442
Sbjct 3486 AGCTCTACTAAAAGAAAAGTAATGCCAACATGAAAAACAACCCCTAGATTGGAGAGCAACATTTCACTTTATAT 3559
Query 1443 -------------------------------------------------------------------------- 1442
Sbjct 3560 GTCTTTCTTCTGAGCCCTGCCCCTATTACATTCTCAGCATTCCAGTCTTTCTCCATAGAAGTCTCTCAGCAAAT 3633
Query 1443 -------------------------------------------------------------------------- 1442
Sbjct 3634 GCTCTTTTTTTGAAATGCTTTAAATGTATACTTTGAGACGGAGGTTTGAGCTGAGTACTGCTGTGGAAAGCTCC 3707
Query 1443 -------------------------------------------------------------------------- 1442
Sbjct 3708 TGCTCAATTCAAAACACAGACCGGGGGGATGTCTTTAGAGTCAGGAGAAAACATCATGTGCCAAGGGTGCTCTC 3781
Query 1443 -------------------------------------------------------------------------- 1442
Sbjct 3782 CAAACTGATGACTAGTTCCCAGACTTAACAGAGGTCAAGCGGAGAAAAAGGAAAACTTTCTTTAGAGAAGAAAA 3855
Query 1443 -------------------------------------------------------------------------- 1442
Sbjct 3856 AGAAAAATCTTATCACTTCTCATATTTCTTTAGGCAGTGTATGAGCTTATTTGCTGATATCACTAATCCTGAGA 3929
Query 1443 -------------------------------------------------------------------------- 1442
Sbjct 3930 TGAAAAACAGGATGGACTTAAGTAATTTTTAACCTATTTCTGAGGCCAAAAAGACTGTAGTATTATTTTAATCA 4003
Query 1443 -------------------------------------------------------------------------- 1442
Sbjct 4004 AATTTATGCATTTTCAGTGGGACTTCAAATTTTAATAATAAGGCAATACTTTTATCTTCTTAAAGTATATTTCC 4077
Query 1443 -------------------------------------------------------------------------- 1442
Sbjct 4078 TGTACTTATAAGTGTGCAAATGACATAATTTTAAAATTAGTTGGAATATTGAAAAAAATTAAAATTTCACTTGT 4151
Query 1443 -------------------------------------------------------------------------- 1442
Sbjct 4152 AAAATAAGTGGATGTGCTTATATCCATTTATTTATTTAAGAAACACATGATGTTTTCTGTGTCCTGGGCATGGT 4225
Query 1443 -------------------------------------------------------------------------- 1442
Sbjct 4226 TCTATGTGCTTTATAAATAAACTCTTTTGATCCATATAACAGTCTTATGAGATAGGTGCCATTATAATCATTTT 4299
Query 1443 -------------------------------------------------------------------------- 1442
Sbjct 4300 ATAGACAGGGAAGCTGAGACACAGAAAACAGCTAAAACAGATTAATGAATTGCTAAGATATAACCGAAGTCAAT 4373
Query 1443 -------------------------------------------------------------------------- 1442
Sbjct 4374 AAAATTAGCAAAGTGCTAACGTATTAAATTTTCCATTTCATTGCCTCTGTCCTGAAAACAGTATTGCTGGTCCA 4447
Query 1443 -------------------------------------------------------------------------- 1442
Sbjct 4448 AGTAACTTGAACCTACACTTGACGGCTGCTTTATCTGAGATTAAAAACATGCAGAAGGATTGGGCGCCTGGGTC 4521
Query 1443 -------------------------------------------------------------------------- 1442
Sbjct 4522 CCTGACATTTGGGTTCTTGATCAGTTACGGGAATCTGTCTTGCAGCAAGTCTGTAAGTTACCTTTATTAGATTT 4595
Query 1443 ---------------- 1442
Sbjct 4596 ACTAATCTCAAAAGAA 4611
