Nucleotide Global Alignment

Description

• Query: TRCN0000474344
• Subject: XM_011249012.1
• Aligned Length: 882
• Identities: 565
• Gaps: 246

Alignment

Query   1  ATGATGCCTCAGGAGCAGTACACTCACCACCGGAGCACCATGCCTGGCTCTGTGGGGCCACAGGTATACAAGGT  74
              |||||||||||.|||||..|.||||||.|||||||||||||..||||||.|||||||||..|||||||.||
Sbjct   1  ---ATGCCTCAGGAACAGTATTCCCACCACAGGAGCACCATGCCCAGCTCTGAGGGGCCACACATATACAAAGT  71

Query  75  GGGGATTTACGGCTGGCGGAAACGATGCCTGTATTTCTTTGTCCTGCTCCTCATGATTTTAATACTGGTGAACT  148
           ||||||||||||||||.|||||.|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  72  GGGGATTTACGGCTGGAGGAAAAGATGCCTGTATTTCTTTGTCCTGCTCCTCATGATTTTAATACTGGTGAACT  145

Query 149  TGGCCATGACCATCTGGATTCTCAAAGTCATGAACTTCACAATTGATGGAATGGGAAACCTGAGGATCACAGAA  222
           |||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||.|.||.|||||||||
Sbjct 146  TGGCCATGACCATCTGGATTCTCAAGGTCATGAACTTCACAATTGATGGAATGGGAAACTTAAGAATCACAGAA  219

Query 223  AAAGGTCTAAAGCTAGAAGGAGACTCTGAATTCTTACAACCTCTCTACGCCAAAGAAATCCAGTCCCGACCAGG  296
           ||.|||||.|||||||||||||||||.|||||||||||||||||||||||||||||||||.|||||||||||||
Sbjct 220  AAGGGTCTGAAGCTAGAAGGAGACTCAGAATTCTTACAACCTCTCTACGCCAAAGAAATCAAGTCCCGACCAGG  293

Query 297  TAATGCCCTGTACTTCAAGTCTGCCAGAAATGTTACAGTGAACATTCTCAATGACCAGACTAAAGTGCTAACTC  370
           |||||||||.||||||||.||||||||.||.||.||||||||||||||||||||.|||||.||||||||.||||
Sbjct 294  TAATGCCCTATACTTCAAATCTGCCAGGAACGTGACAGTGAACATTCTCAATGATCAGACAAAAGTGCTGACTC  367

Query 371  AGCTTATAACAGGTCCAAAAGCCGTAGAAGCTTATGGTAAAAAATTTGAGGTAAAAACTGTTTCTGGAAAATTG  444
           ||||..|.||||||||.||.||.||.|||||.|||||.||||..|||||.||||||||||||||||||||||||
Sbjct 368  AGCTGGTGACAGGTCCGAAGGCTGTGGAAGCATATGGCAAAAGGTTTGAAGTAAAAACTGTTTCTGGAAAATTG  441

Query 445  CTCTTCTCTGCAGACAATAATGAAGTGGTAGTAGGAGCTGAAAGATTACGAGTTTTAGGAGCGGAGGGCACAGT  518
           |||||.|||||.||..|.|.|||||||||.||.||||||||.|||||..||||.||||||||.||.||||||||
Sbjct 442  CTCTTTTCTGCGGATGACAGTGAAGTGGTCGTGGGAGCTGAGAGATTGAGAGTCTTAGGAGCTGAAGGCACAGT  515

Query 519  GTTCCCTAAATCTATAGAAACACCTAATGTCAGGGCAGACCCCTTCAAAGAACTAAGGTTGGAGTCCCCAACCC  592
           .|||||.|||||.||||||||||||||||||||.||||||||||||||.||||||||||   |.|.||      
Sbjct 516  CTTCCCCAAATCCATAGAAACACCTAATGTCAGAGCAGACCCCTTCAAGGAACTAAGGT---ATTTCC------  580

Query 593  GGTCT--CTAGTGATGGAGGCCCCAAAAGGAGTGGAAATCAATGCAGAAGCTGGCAATATGGAAGCCACCTGC-  663
             |||  |||  ..||||.|||               || |.|.|.||||||                 |||| 
Sbjct 581  --TCTGCCTA--TCTGGAAGCC---------------AT-ACTACTGAAGCT-----------------CTGCT  617

Query 664  ---------AGGACAGAGCTGAGACTGGAATCCAAAGATGGAGAGATTAAGTTAGATGCTGCGAAAATCAGGCT  728
                    |  .|||.|.||||             |||||         ||                  ||| 
Sbjct 618  TCTCTTCTTA--CCAGGGATGAG-------------GATGG---------GT------------------GGC-  648

Query 729  ACCTAGACTGCCTCATGGATCCTACACGCCTACAGGAACGAGGCAGAAGGTCTTCGAGATCTGCGTCTGCGCCA  802
                                                                                     
Sbjct 649  --------------------------------------------------------------------------  648

Query 803  ATGGGAGATTATTCCTGTCTCAGGCAGGAGCTGGGTCCACTTGTCAGATAAACACAAGTGTCTGCCTC  870
                                                                               
Sbjct 649  --------------------------------------------------------------------  648