Nucleotide Global Alignment

Description

Query:
TRCN0000474398
Subject:
XM_011537989.3
Aligned Length:
2252
Identities:
759
Gaps:
1492

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGCTGCGGCGGGGCAGCCAGGCGCTCCGGCGCTTCTCCACTGGCCGGGTTTATTTCAAAAACAAGCTGAAGTT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGCACTAATTGGCCAGAGCCTCTTTGGACAAGAAGTCTATAGCCACCTCCGCAAAGAGGGCCACCGAGTAGTAG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GGGTGTTCACAGTTCCAGACAAGGATGGAAAAGCTGACCCTCTGGCTTTGGCTGCAGAGAAAGATGGGACCCCT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GTGTTCAAGCTTCCTAAATGGAGGGTCAAGGGCAAGACCATCAAAGAAGTGGCAGAAGCCTACAGATCCGTGGG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TGCAGAGCTAAATGTGCTCCCTTTCTGCACTCAGTTCATTCCCATGGATATAATTGATAGTCCAAAGCACGGCT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CTATCATTTATCACCCATCCATCCTGCCCAGGCACAGAGGAGCCTCTGCTATCAATTGGACTCTAATTATGGGA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GATAAGAAAGCTGGGTTTTCTGTTTTCTGGGCTGATGATGGCTTGGATACAGGACCCATCCTTCTTCAGAGATC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  ATGTGATGTTGAACCCAATGATACAGTGGATGCACTTTATAATCGGTTTCTTTTTCCTGAAGGAATCAAGGCCA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TGGTAGAAGCTGTCCAACTCATAGCTGATGGAAAAGCTCCTCGTATACCCCAGCCAGAAGAAGGGGCAACATAT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GAAGGTATCCAGAAAAAGGAAAATGCTGAGATTTCTTGGGACCAGTCTGCCGAAGTTTTACATAACTGGATTCG  740

Query    1  ----------------------------------------------ATGGTCACTTTCTATGGCTCGACATTAC  28
                                                          ||||||||||||||||||||||||||||
Sbjct  741  AGGTCATGATAAAGTCCCTGGAGCTTGGACAGAGATAAATGGACAGATGGTCACTTTCTATGGCTCGACATTAC  814

Query   29  TGAATAGCTCTGTGCCTCCTGGAGAACCACTGGAAATTAAAGGTGCCAAGAAGCCTGGTCTCGTTACCAAAAAT  102
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  TGAATAGCTCTGTGCCTCCTGGAGAACCACTGGAAATTAAAGGTGCCAAGAAGCCTGGTCTCGTTACCAAAAAT  888

Query  103  GGACTTGTTCTTTTTGGTAACGATGGAAAAGCACTGACGGTGAGAAATCTGCAGTTTGAAGATGGAAAAATGAT  176
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  GGACTTGTTCTTTTTGGTAACGATGGAAAAGCACTGACGGTGAGAAATCTGCAGTTTGAAGATGGAAAAATGAT  962

Query  177  CCCTGCCTCTCAGTACTTTTCAACGGGTGAGACGTCAGTGGTAGAACTGACAGCTGAAGAGGTGAAAGTGGCAG  250
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  CCCTGCCTCTCAGTACTTTTCAACGGGTGAGACGTCAGTGGTAGAACTGACAGCTGAAGAGGTGAAAGTGGCAG  1036

Query  251  AGACCATCAAGGTCATCTGGGCTGGAATTTTAAGCAATGTCCCCATTATTGAAGACTCAACAGACTTCTTTAAA  324
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  AGACCATCAAGGTCATCTGGGCTGGAATTTTAAGCAATGTCCCCATTATTGAAGACTCAACAGACTTCTTTAAA  1110

Query  325  TCTGGAGCAAGCTCAATGGATGTTGCCAGGCTGGTTGAAGAGATCAGACAGAAATGTGGTGGGCTTCAGTTGCA  398
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  TCTGGAGCAAGCTCAATGGATGTTGCCAGGCTGGTTGAAGAGATCAGACAGAAATGTGGTGGGCTTCAGTTGCA  1184

Query  399  GAATGAAGATGTCTATATGGCCACCAAGTTTGAAGGCTTTATCCAAAAGGTCGTGAGGAAACTGAGAGGAGAAG  472
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  GAATGAAGATGTCTATATGGCCACCAAGTTTGAAGGCTTTATCCAAAAGGTCGTGAGGAAACTGAGAGGAGAAG  1258

Query  473  ATCAAGAGGTGGAGCTGGTTGTAGATTATATTTCAAAGGAGGTCAATGAAATCATGGTAAAAATGCCATACCAG  546
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  ATCAAGAGGTGGAGCTGGTTGTAGATTATATTTCAAAGGAGGTCAATGAAATCATGGTAAAAATGCCATACCAG  1332

Query  547  TGTTTCATAAATGGACAGTTCACAGATGCAGACGATGGAAAGACTTACGACACTATCAACCCAACAGATGGATC  620
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  TGTTTCATAAATGGACAGTTCACAGATGCAGACGATGGAAAGACTTACGACACTATCAACCCAACAGATGGATC  1406

Query  621  TACAATATGCAAAGTATCCTACGCTTCTTTGGCGGATGTTGATAAAGCAGTAGCAGCAGCAAAAGATGCTTTTG  694
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  TACAATATGCAAAGTATCCTACGCTTCTTTGGCGGATGTTGATAAAGCAGTAGCAGCAGCAAAAGATGCTTTTG  1480

Query  695  AAAACGGTGAATGGGGAAGAATGAATGCAAGAGAAAGAGGAAGATTGATGTATAGACTTGCAGACCTACTGGAA  768
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |.||             |
Sbjct 1481  AAAACGGTGAATGGGGAAGAATGAATGCAAGAGAAAGAGGAAGATTGATGTATAG-CATG-------------A  1540

Query  769  GA--GAACCAAGAAGAGCTGGCAACTATTGAAGCCCTTGATTCAGGGGCTGTCTATACCTTGGCCCTGAAGACA  840
            ||  ||||                                                                  
Sbjct 1541  GAATGAAC------------------------------------------------------------------  1548

Query  841  CACATTGGAATGTCTGTGCAAACATTCAGATATTTTGCTGGCTGGTGCGACAAAATTCAGGGTTCTACTATTCC  914
                                                                                      
Sbjct 1549  --------------------------------------------------------------------------  1548

Query  915  AATCAACCAGGCCCGTCCAAATCGCAATCTGACCTTCACCAAGAAAGAGCCACTCGGTGTCTGTGCCATTATTA  988
                                                                                      
Sbjct 1549  --------------------------------------------------------------------------  1548

Query  989  TTCCCTGGAACTACCCGCTGATGATGCTGGCATGGAAGAGTGCTGCGTGTTTGGCAGCAGGCAATACCTTAGTG  1062
                                                                                      
Sbjct 1549  --------------------------------------------------------------------------  1548

Query 1063  CTCAAGCCAGCACAGGTCACGCCCTTGACTGCTTTGAAGTTTGCAGAACTGTCTGTGAAAGCAGGCTTTCCAAA  1136
                                                                                      
Sbjct 1549  --------------------------------------------------------------------------  1548

Query 1137  GGGGGTCATCAACATCATTCCAGGCTCAGGTGGCATAGCAGGACAACGTCTGTCTGAACATCCTGACATCCGCA  1210
                                                                                      
Sbjct 1549  --------------------------------------------------------------------------  1548

Query 1211  AACTTGGTTTCACTGGATCCACTCCTATTGGCAAACAGATCATGAAGAGCTGTGCTGTTAGCAACTTGAAGAAA  1284
                                                                                      
Sbjct 1549  --------------------------------------------------------------------------  1548

Query 1285  GTTTCCCTTGAGCTTGGTGGCAAGTCTCCACTTATAATATTTAATGACTGTGAACTTGACAAGGCTGTGCGAAT  1358
                                                                                      
Sbjct 1549  --------------------------------------------------------------------------  1548

Query 1359  GGGCATGGGAGCAGTATTTTTCAACAAAGGAGAGAACTGTATTGCTGCTGGGCGGTTGTTCGTGGAAGAATCCA  1432
                                                                                      
Sbjct 1549  --------------------------------------------------------------------------  1548

Query 1433  TCCACGACGAATTTGTGACAAGAGTGATCCAC  1464
                                            
Sbjct 1549  --------------------------------  1548

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