Nucleotide Global Alignment
Description
- Query:
- TRCN0000474419
- Subject:
- NM_001348102.1
- Aligned Length:
- 2655
- Identities:
- 1491
- Gaps:
- 996
Alignment
Query 1 ATGTCTGCCCTGGCATGCCTCCGGAGGCTGTGTCGGCACGTGTCCCCGCAGGCTGTCCTTTTCCTGCTGTTAGT 74
|||.||||||||||.||||||||||||||||||||||||.|||||||.|||||||||||.|||||||||||.||
Sbjct 1 ATGCCTGCCCTGGCGTGCCTCCGGAGGCTGTGTCGGCACCTGTCCCCACAGGCTGTCCTGTTCCTGCTGTTCGT 74
Query 75 CTTCTGCCTGTTCAGCGTTTTCATCTCGGCCTACTACCTATATGGCTGGAAGCGAGGCCTGGAGCCCTCGGCGG 148
|||||||||||||||||||||..||||.|||||||||||||||||.|||||.||.|||||.|||||||||||.|
Sbjct 75 CTTCTGCCTGTTCAGCGTTTTTGTCTCTGCCTACTACCTATATGGTTGGAACCGGGGCCTTGAGCCCTCGGCAG 148
Query 149 ATGCCCCCGAGCCTGACTGCGGGGACCCGCCGCCTGTGGCCCCCAGTCGCCTGCTGCCACTCAAGCCTGTGCAG 222
||||..|||||.|||||||.|||||||||||.|||||.|||||.||.|||||.||||||.|||||||.||||||
Sbjct 149 ATGCTTCCGAGTCTGACTGTGGGGACCCGCCACCTGTCGCCCCTAGCCGCCTCCTGCCAATCAAGCCCGTGCAG 222
Query 223 GCAGCCACCCCTTCCCGCACAGACCCGTTGGTGCTGGTCTTTGTGGAGAGCCTCTACTCGCAACTGGGCCAGGA 296
||.|...||||||||||.||||||||..||||||||||.||||||||||||||.||.||.||.|||||||||||
Sbjct 223 GCGGTTGCCCCTTCCCGAACAGACCCACTGGTGCTGGTATTTGTGGAGAGCCTTTATTCACAGCTGGGCCAGGA 296
Query 297 GGTGGTGGCCATCCTGGAGTCCAGCCGCTTCAAATACCGCACAGAGATTGCGCCGGGCAAGGGTGACATGCCCA 370
|||||||||.||||||||.|||||.||||||||||||||.|||||||||||.|||||||||||.||||||||||
Sbjct 297 GGTGGTGGCAATCCTGGAATCCAGTCGCTTCAAATACCGGACAGAGATTGCACCGGGCAAGGGGGACATGCCCA 370
Query 371 CGCTCACTGACAAGGGCCGTGGCCGCTTCGCCCTCATCATCTATGAGAACATCCTCAAGTATGTCAACCTGGAC 444
|.|||||.|||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||.
Sbjct 371 CACTCACAGACAAGGGCCGTGGCCGCTTCGCCCTCATCATCTACGAGAACATCCTCAAGTATGTCAACCTGGAT 444
Query 445 GCCTGGAACCGGGAGCTGCTGGACAAGTACTGTGTGGCCTACGGCGTGGGCATCATTGGCTTCTTCAAGGCCAA 518
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct 445 GCCTGGAACCGGGAGCTGCTGGACAAGTACTGTGTGGCCTACGGCGTGGGCATCATTGGATTCTTCAAGGCCAA 518
Query 519 TGAGAACAGCCTGCTGAGTGCGCAGCTCAAGGGCTTCCCCCTGTTCCTGCACTCAAACCTGGGCCTGAAGGACT 592
|||||||||||||||||||||.||||||||.||||||||.||.||||||||.||.|||||||||.||||.||||
Sbjct 519 TGAGAACAGCCTGCTGAGTGCACAGCTCAAAGGCTTCCCTCTCTTCCTGCATTCGAACCTGGGCTTGAAAGACT 592
Query 593 GCAGCATCAACCCCAAGTCCCCGCTGCTCTACGTGACGCGACCTAGCGAGGTGGAGAAAGGTGTGCTCCCCGGC 666
|||||||||||||||||||.||.||||||||.|||||.||.||.||.|||||.||||||||.|||||.|||||.
Sbjct 593 GCAGCATCAACCCCAAGTCACCACTGCTCTATGTGACACGGCCCAGTGAGGTAGAGAAAGGCGTGCTGCCCGGA 666
Query 667 GAGGACTGGACGGTTTTCCAGTCAAATCACTCCACCTATGAGCCAGTGCTGCTGGCCAAGACGCGCTCGTCTGA 740
|||||.|||||.||.||||||||.||.||.||.|||||.||.|||||||||.||||||||||.|||||.||.||
Sbjct 667 GAGGATTGGACTGTGTTCCAGTCCAACCATTCTACCTACGAACCAGTGCTGTTGGCCAAGACACGCTCCTCCGA 740
Query 741 GTCCATCCCACACCTGGGCGCAGACGCCGGCCTGCATGCTGCACTGCACGCCACTGTGGTCCAGGACCTGGGCC 814
.|||||||||||||||||.||.||.||.||||||||||||||.||||||||.||||||||||||||||||||.|
Sbjct 741 ATCCATCCCACACCTGGGTGCTGATGCTGGCCTGCATGCTGCGCTGCACGCTACTGTGGTCCAGGACCTGGGTC 814
Query 815 TGCACGACGGCATCCAGCGCGTGCTGTTTGGCAACAACCTGAACTTCTGGCTGCACAAGCTTGTCTTCGTGGAT 888
|.|||||.|||||||||||.|||||.||||||||||||||.|||||.||||||||.||||||||||||||||||
Sbjct 815 TCCACGATGGCATCCAGCGTGTGCTCTTTGGCAACAACCTCAACTTTTGGCTGCATAAGCTTGTCTTCGTGGAT 888
Query 889 GCCGTGGCCTTCCTCACGGGGAAGCGCCTCTCCCTGCCATTGGACCGCTACATCCTGGTGGACATTGATGACAT 962
||.|||||||||||||||||||||||||||||.|||||.||||||||.||||||||||||||.|||||||||||
Sbjct 889 GCTGTGGCCTTCCTCACGGGGAAGCGCCTCTCACTGCCTTTGGACCGATACATCCTGGTGGATATTGATGACAT 962
Query 963 CTTCGTGGGCAAGGAGGGCACACGCATGAAGGTGGAGGACGTGAAGGCCCTGTTTGACACACAGAACGAACTAC 1036
.||.|||||||||||||||||||||||||||||||||||.|||||||||||||||||.||||||||.|||||.|
Sbjct 963 TTTTGTGGGCAAGGAGGGCACACGCATGAAGGTGGAGGATGTGAAGGCCCTGTTTGATACACAGAATGAACTCC 1036
Query 1037 GCGCACACATCCCAAACTTCACCTTCAACCTGGGCTACTCAGGGAAATTCTTCCAGACAGGTACCAATGCTGAG 1110
||.||||.||.||||||||||||||||||||||||||||||||||||||||||||.||||||||..||||||||
Sbjct 1037 GCACACATATTCCAAACTTCACCTTCAACCTGGGCTACTCAGGGAAATTCTTCCACACAGGTACGGATGCTGAG 1110
Query 1111 GACGCTGGGGATGATCTGCTGCTGTCGTATGTGAAGGAGTTCTGGTGGTTCCCCCACATGTGGAGCCACATGCA 1184
||.|||||.||.|||||||||.||||.||||||||.||||||||||||||||||||||||||||||||.|||||
Sbjct 1111 GATGCTGGCGACGATCTGCTGTTGTCCTATGTGAAAGAGTTCTGGTGGTTCCCCCACATGTGGAGCCATATGCA 1184
Query 1185 GCCCCACCTTTTCCACAACCAGTCCGTGTTGGCCGAGCAGATGGCCTTGAACAAGAAGTTCGCTGTCGAGCATG 1258
.||||||||.|||||||||||.||.|||.||||.||||||||||||.|||||||||||||||||||||||||.|
Sbjct 1185 ACCCCACCTCTTCCACAACCAATCTGTGCTGGCAGAGCAGATGGCCCTGAACAAGAAGTTCGCTGTCGAGCACG 1258
Query 1259 GCATTCCCACAGACATGGGGTATGCAGTGGCGCCCCACCACTCGGGCGTGTACCCCGTGCACGTGCAGCTGTAC 1332
||||.||||||||.|||||.|||||.|||||||||||||||||.||.||||||||.|||||||||||||||||.
Sbjct 1259 GCATCCCCACAGATATGGGCTATGCGGTGGCGCCCCACCACTCCGGTGTGTACCCTGTGCACGTGCAGCTGTAT 1332
Query 1333 GAGGCTTGGAAGCAGGTGTGGAGCATCCGCGTGACCAGCACGGAGGAGTACCCCCACCTGAAGCCAGCCCGCTA 1406
|||||.||||||||.||||||.|||||||.|||||||||||.|||||||||||.||.||||||||.|||||.||
Sbjct 1333 GAGGCCTGGAAGCAAGTGTGGGGCATCCGTGTGACCAGCACAGAGGAGTACCCACATCTGAAGCCGGCCCGGTA 1406
Query 1407 CCGCCGTGGCTTCATCCACAATGGCATCATGGTTCTCCCACGGCAGACCTGCGGCCTCTTCACACACACCATCT 1480
||||||||||||.||||||||||||||||||||.|||||.|||||||||||.||||||||.|||||||||||||
Sbjct 1407 CCGCCGTGGCTTTATCCACAATGGCATCATGGTCCTCCCTCGGCAGACCTGTGGCCTCTTTACACACACCATCT 1480
Query 1481 TCTACAACGAGTACCCTGGCGGCTCCAGTGAGCTGGACAAGATCATCAACGGGGGCGAGCTCTTCCTCACCGTG 1554
|||||||||||||||||||.|||||||||||||||||||||||||||||.||||||||||||||||||||.|||
Sbjct 1481 TCTACAACGAGTACCCTGGAGGCTCCAGTGAGCTGGACAAGATCATCAATGGGGGCGAGCTCTTCCTCACTGTG 1554
Query 1555 CTCCTCAATCCTGTGAG--------TG--------------------------------------------CTC 1576
||||||||||||.|.|| || ||.
Sbjct 1555 CTCCTCAATCCTATCAGCATCTTCATGACACACTTATCCAACTATGGAAATGACCGCCTGGGACTATACACCTT 1628
Query 1577 CACAGCCCATGG-------------CTGCTGG-------TGAGAAGGGGCTGCTGCACAGCCTGTC-----TGC 1625
|| |||.|.||| ||.|||| |||| ||||||.|..|||.| |||
Sbjct 1629 CA-AGCACCTGGTGCGCTTCCTGCACTCCTGGACCAACCTGAG--------GCTGCAGACTCTGCCCCCCGTGC 1693
Query 1626 AGCTGACACAG-----------------------------------GCTT----------CCTG-GAG------ 1647
|||||.|.||| |||| |||| |||
Sbjct 1694 AGCTGGCCCAGAAGTACTTTCAGATCTTTTCTGAGGAGAAGGACCCGCTTTGGCAGGATCCCTGTGAGGACAAA 1767
Query 1648 -----CCAGGAAA--GGGT----GGAG-AGGCA----------------------------------------- 1668
|.||||.| .||| |||| ||.||
Sbjct 1768 CGCCACAAGGACATCTGGTCTAAGGAGAAGACATGTGACCGCTTCCCAAAGCTTCTTATCATTGGCCCCCAGAA 1841
Query 1669 -------------------------------------------------------------------------- 1668
Sbjct 1842 AACAGGCACCACGGCCCTCTACCTGTTCCTGGGCATGCACCCGGACCTCAGCAGCAACTACCCCAGCTCCGAGA 1915
Query 1669 -------------------------------------------------------------------------- 1668
Sbjct 1916 CCTTCGAGGAGATCCAGTTTTTTAACGGCCACAACTATCACAAAGGCATCGACTGGTACATGGAGTTCTTCCCT 1989
Query 1669 -------------------------------------------------------------------------- 1668
Sbjct 1990 ATTCCCTCCAACACCACCTCGGACTTCTACTTTGAGAAAAGTGCCAACTACTTTGATTCAGAAGTGGCACCACG 2063
Query 1669 -------------------------------------------------------------------------- 1668
Sbjct 2064 GCGGGCAGCTGCACTGTTGCCCAAGGCCAAGATCCTCAGCATCCTCATCAACCCAGCCGACCGGGCTTATTCCT 2137
Query 1669 -------------------------------------------------------------------------- 1668
Sbjct 2138 GGTACCAGCACCAGCGAGCCCATGATGACCCAGTGGCCCTAAAGTACACCTTTCATGAGGTGATCACAGCTGGC 2211
Query 1669 -------------------------------------------------------------------------- 1668
Sbjct 2212 CCTGATGCATCCTCAAAGCTGCGTGCCCTCCAGAACCGGTGCCTGGTCCCAGGCTGGTATGCCACTCATATTGA 2285
Query 1669 -------------------------------------------------------------------------- 1668
Sbjct 2286 ACGCTGGCTCAGCGCCTTTCATGCCAACCAGATCCTGGTCTTGGATGGCAAACTGCTGCGAACAGAACCTGCCA 2359
Query 1669 -------------------------------------------------------------------------- 1668
Sbjct 2360 AAGTCATGGACACAGTGCAGAAATTCCTTGGGGTGACCAGCACTGTCGACTACCATAAAACCTTGGCGTTTGAT 2433
Query 1669 -------------------------------------------------------------------------- 1668
Sbjct 2434 CCAAAGAAGGGATTTTGGTGCCAACTGCTTGAAGGAGGAAAAACCAAGTGTCTGGGAAAAAGCAAGGGACGGAA 2507
Query 1669 -------------------------------------------------------------------------- 1668
Sbjct 2508 ATATCCAGAGATGGACTTGGATTCCCGAGCCTTCCTAAAGGATTACTTCCGGGACCACAACATTGAGCTCTCTA 2581
Query 1669 ----------------------------------------------------------------- 1668
Sbjct 2582 AGCTGCTGTATAAGATGGGCCAGACACTGCCCACCTGGCTGCGGGAAGACCTCCAGAACACCAGG 2646
