Nucleotide Global Alignment
Description
- Query:
- TRCN0000474427
- Subject:
- NR_144379.1
- Aligned Length:
- 3861
- Identities:
- 1549
- Gaps:
- 2312
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGTGTGGAAAAAGTATGTCGGCAAGTCAGCTGGTTTCCCAGTGCAGGACGCGCTGACAGCTCGAGTGAGCGGAC 74
Query 1 ---------------------------------------------------ATGAAGAAAAACAGAGAAAGATT 23
|||||||||||||||||||||||
Sbjct 75 TGCCCAGGACTTCGGAACTAGACGAGTTCTGTAGAAATCCTGTCAAAGAATATGAAGAAAAACAGAGAAAGATT 148
Query 24 CTGCAATAGAGAGAGAGAATTTGTATATAAATTTAAAGTAGGAAGTCAGTGCTTAGAACTGAGAGTGCCACTCA 97
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CTGCAATAGAGAGAGAGAATTTGTATATAAATTTAAAGTAGGAAGTCAGTGCTTAGAACTGAGAGTGCCACTCA 222
Query 98 AATTTCCTGTTCAAGAGAATGCCAGTCATTTGCATGGACGTCTGATGCTGCTGCACAGTTTACCGTGCTTTATA 171
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AATTTCCTGTTCAAGAGAATGCCAGTCATTTGCATGGACGTCTGATGCTGCTGCACAGTTTACCGTGCTTTATA 296
Query 172 GAAAAAGACTTAAAAGAAGCTCTGACTCAGTTTATAGAAGAAGAATCCCTCAGCGATTATGATAGAGATGCTGA 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GAAAAAGACTTAAAAGAAGCTCTGACTCAGTTTATAGAAGAAGAATCCCTCAGCGATTATGATAGAGATGCTGA 370
Query 246 AGCATCCCTGGCAGCTGTGAAATCAGGTGAAGTAGATTTACATCAGCTGGCGAGTACATGGGCCAAAGCTTATG 319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AGCATCCCTGGCAGCTGTGAAATCAGGTGAAGTAGATTTACATCAGCTGGCGAGTACATGGGCCAAAGCTTATG 444
Query 320 CTGAGACCACGTTAGAGCATGCAAGGCCTGAAGAACCCAGCTGGGATGAAGATTTTGCAGATGTGTACCATGAC 393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CTGAGACCACGTTAGAGCATGCAAGGCCTGAAGAACCCAGCTGGGATGAAGATTTTGCAGATGTGTACCATGAC 518
Query 394 TTAATTCATTCTCCTGCCTCTGAAACTCTCTTAAATTTGGAACATAATTACTTTGTTAGTATCTCAGAACTGAT 467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TTAATTCATTCTCCTGCCTCTGAAACTCTCTTAAATTTGGAACATAATTACTTTGTTAGTATCTCAGAACTGAT 592
Query 468 TGGTGAAAGAGATGTGGAGCTGAAAAAATTACGAGAGAGACAAGGTATTGAAATGGAAAAAGTCATGCAGGAAT 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TGGTGAAAGAGATGTGGAGCTGAAAAAATTACGAGAGAGACAAGGTATTGAAATGGAAAAAGTCATGCAGGAAT 666
Query 542 TGGGAAAATCACTGACAGATCAAGATGTAAATTCACTGGCTGCTCAGCATTTTGAATCCCAGCAAGACCTAGAA 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TGGGAAAATCACTGACAGATCAAGATGTAAATTCACTGGCTGCTCAGCATTTTGAATCCCAGCAAGACCTAGAA 740
Query 616 AATAAATGGTCGAATGAATTAAAACAATCAACTGCCATCCAAAAACAAGAGTATCAAGAATGGGTAATAAAACT 689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AATAAATGGTCGAATGAATTAAAACAATCAACTGCCATCCAAAAACAAGAGTATCAAGAATGGGTAATAAAACT 814
Query 690 TCACCAAGACCTAAAAAACCCCAACAACAGCTCCCTTAGTGAGGAAATTAAAGTTCAGCCAAGTCAGTTCAGAG 763
||||||||||||||||||||||||||||||||||
Sbjct 815 TCACCAAGACCTAAAAAACCCCAACAACAGCTCC---------------------------------------- 848
Query 764 AATCTGTAGAAGCAATTGGAAGGATTTATGAGGAACAGAGAAAGTTAGAAGAAAGTTTTACCATTCACTTAGGA 837
|||||||
Sbjct 849 -------------------------------------------------------------------CTTAGGA 855
Query 838 GCCCAGTTGAAGACCATGCATAATTTGAGATTGCTGAGAGCAGATATGCTGGACTTCTGTAAGCATAAAAGAAA 911
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 856 GCCCAGTTGAAGACCATGCATAATTTGAGATTGCTGAGAGCAGATATGCTGGACTTCTGTAAGCATAAAAGAAA 929
Query 912 TCATCGAAGTGGTGTGAAACTTCATCGGCTCCAAACAGCTCTGTCACTTTATTCTACATCTCTCTGTGGCCTGG 985
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 930 TCATCGAAGTGGTGTGAAACTTCATCGGCTCCAAACAGCTCTGTCACTTTATTCTACATCTCTCTGTGGCCTGG 1003
Query 986 TTTTACTAGTAGATAATCGAATTAATTCATATAGTGGTATTAAAAGAGATTTTGCCACAGTTTGCCAAGAATGC 1059
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1004 TTTTACTAGTAGATAATCGAATTAATTCATATAGTGGTATTAAAAGAGATTTTGCCACAGTTTGCCAAGAATGC 1077
Query 1060 ACTGACTTCCATTTCCCCCGAATTGAAGAGCAATTAGAAGTTGTCCAACAGGTGGTACTTTATGCTAGAACCCA 1133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1078 ACTGACTTCCATTTCCCCCGAATTGAAGAGCAATTAGAAGTTGTCCAACAGGTGGTACTTTATGCTAGAACCCA 1151
Query 1134 GCGCAGGAGTAAATTGAAAGAATCACTTGATTCTGGAAACCAAAATGGAGGAAATGATGATAAGACTAAGAATG 1207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1152 GCGCAGGAGTAAATTGAAAGAATCACTTGATTCTGGAAACCAAAATGGAGGAAATGATGATAAGACTAAGAATG 1225
Query 1208 CTGAGAGGAACTATTTAAATGTTTTACCTGGGGAATTTTATATTACACGGCATTCTAATCTCTCAGAAATCCAT 1281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1226 CTGAGAGGAACTATTTAAATGTTTTACCTGGGGAATTTTATATTACACGGCATTCTAATCTCTCAGAAATCCAT 1299
Query 1282 GTTGCTTTCCATCTCTGTGTGGATGACCATGTGAAATCGGGAAACATCACTGCTCGTGATCCTGCCATTATGGG 1355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1300 GTTGCTTTCCATCTCTGTGTGGATGACCATGTGAAATCGGGAAACATCACTGCTCGTGATCCTGCCATTATGGG 1373
Query 1356 ACTCCGAAATATACTCAAAGTTTGCTGTACCCATGACATCACAACAATAAGCATTCCTCTCTTGCTGGTACATG 1429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1374 ACTCCGAAATATACTCAAAGTTTGCTGTACCCATGACATCACAACAATAAGCATTCCTCTCTTGCTGGTACATG 1447
Query 1430 ATATGTCAGAGGAAATGACTATACCCTGGTGCTTAAGGAGAGCGGAACTTGTGTTCAAGTGTGTCAAAGGTTTC 1503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1448 ATATGTCAGAGGAAATGACTATACCCTGGTGCTTAAGGAGAGCGGAACTTGTGTTCAAGTGTGTCAAAGGTTTC 1521
Query 1504 ATGATGGAAATGGCTTCATGGGATGGAGGAATTTCTAGGACAGTGCAATTTCTAGTACCACAGAGTATTTCTGA 1577
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1522 ATGATGGAAATGGCTTCATGGGATGGAGGAATTTCTAGGACAGTGCAATTTCTAGTACCACAGAGTATTTCTGA 1595
Query 1578 AGAAATGTTTTATCAACTTAGTAACATGCTTCCCCAGATCTTCCGAGTATCATCAACACTCACTCTGACATCCA 1651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1596 AGAAATGTTTTATCAACTTAGTAACATGCTTCCCCAGATCTTCCGAGTATCATCAACACTCACTCTGACATCCA 1669
Query 1652 AGCAC--------------------------------------------------------------------- 1656
|||||
Sbjct 1670 AGCACTAAACCCTTATAGATTGACATGCTGGCAGAAGATGATTGTTAAACTCTCCAGGAACTTGTGCTATGCTG 1743
Query 1657 -------------------------------------------------------------------------- 1656
Sbjct 1744 GGAATCTGTCAAGCAAAAGATGCCCAGAAAGAGAACTTGCAGCTCAATCCACAAATCAAGATACATGTGTGTGA 1817
Query 1657 -------------------------------------------------------------------------- 1656
Sbjct 1818 AACCATTCCAAAAATTTATATACTGCACAAACTGGTGATCAACCCCTAACTTAAACACTTAAAGTCTCTTTATG 1891
Query 1657 -------------------------------------------------------------------------- 1656
Sbjct 1892 AATTTCTCTTTTTTTCTTCTCTGTGTTACCTGTGAATATTAGTAATCTAAAACTTTTTATTTATCACACATGGA 1965
Query 1657 -------------------------------------------------------------------------- 1656
Sbjct 1966 CACTTGGGAAAGGAAACTTGATTATATTTACATGGAGGCATTTGACTTTTTCAAGAGGCTTGACTCGTCTCAGG 2039
Query 1657 -------------------------------------------------------------------------- 1656
Sbjct 2040 TGCAATCCTTAATTAAACATACAAACAAAATTTTCCTTTTACTTTCTTTGCCAAAACAAAATGTAAAAGCACTG 2113
Query 1657 -------------------------------------------------------------------------- 1656
Sbjct 2114 AAATATACATTGCAAGTACAAATTTCCTGTGAAAATCTTTTTATAGAAACACAAATGTATAAGACAAATGTGCT 2187
Query 1657 -------------------------------------------------------------------------- 1656
Sbjct 2188 TGTTCTTTTAAATTCTCCTGTTTCAGAATCTCTTTTTAATCTACTCCTAAGGATGTACAAGTTAGAGTCAGAAG 2261
Query 1657 -------------------------------------------------------------------------- 1656
Sbjct 2262 ACGTTTTGGATTTTTTCCCTCTCTCTCATCCTCCCGCTGTGCCCTTGCACTTGCATATTAATAACATTTCATGG 2335
Query 1657 -------------------------------------------------------------------------- 1656
Sbjct 2336 ACTGGGAAATAGTGTTCTTTTTTGCAAGCTTGATGTCAAGTTAGTCTAAACCAGCACCTGGCAGTATTTTAGTG 2409
Query 1657 -------------------------------------------------------------------------- 1656
Sbjct 2410 CTCATCAACATTGTGACAATCACACAAGGAAGATCATTTCTACATTTCTGTCCTCCCTGCGTTCTCAGCTTGCT 2483
Query 1657 -------------------------------------------------------------------------- 1656
Sbjct 2484 TAACCATTCCTCTACCTCTTGCATTTTTTTGCGGATAAATGTATCCCCATTTCTGCTTCTCTGTTTCCCCTCCT 2557
Query 1657 -------------------------------------------------------------------------- 1656
Sbjct 2558 TTTCCATTGTTTTTCCTTATGGTACTACTTTCTCAGGTGCTACATATCATATATTTGTCCCATCTATAACATAT 2631
Query 1657 -------------------------------------------------------------------------- 1656
Sbjct 2632 TTAAATGCTATAAGTAGTAACTCCATTAAACAAAGGCATTTACAAAAGCACACAGGTGTTTAGAAAAGCAATAG 2705
Query 1657 -------------------------------------------------------------------------- 1656
Sbjct 2706 TTTCATCAATTCCAAGTTATGTGGATATTGTAACTGGCCACAAGAATGAAATGGAGGGCATTTGGTGTCATAAG 2779
Query 1657 -------------------------------------------------------------------------- 1656
Sbjct 2780 ATGGCATGTCTTGATGACAAGAAACAAAACGCCCTTCATTAATATGCCTCAGTGTAATAACTATTATAGAAACT 2853
Query 1657 -------------------------------------------------------------------------- 1656
Sbjct 2854 GTTGGCAAGCAGAGTGCTTTCCTATAACAGAATGTGTCTTAATTTTCTACTCGAGGGAAAGGTTTGTCCAGGTA 2927
Query 1657 -------------------------------------------------------------------------- 1656
Sbjct 2928 ACAACACTAAAGACAACCCTAAGAACACCCACTCCAGCAGTATGTCCATTAGACACTAAAACTCTCCAAATTAT 3001
Query 1657 -------------------------------------------------------------------------- 1656
Sbjct 3002 TTGTCAGGGAGCCTGGCGATTCTGCCAAGAAGGCAGGTGTTTTGCCCTTAGAGCCTATACAGTTCTCTTGGAGA 3075
Query 1657 -------------------------------------------------------------------------- 1656
Sbjct 3076 AATTGTCTTTCAGGCACCACTGTTAATCACTGAGACTGATTCTAATGCAAAGCAGGGAAGACAGAGGCAGAAAC 3149
Query 1657 -------------------------------------------------------------------------- 1656
Sbjct 3150 CAGGAGAGTGGTAGATCAGTGCAGCCCAGATATCGGAATGGAGGAGCAAAGTTTCATTCACGGATGTTTGTTGA 3223
Query 1657 -------------------------------------------------------------------------- 1656
Sbjct 3224 ATGCTGCTGCCCAACTCTTCCTTTGTCACCTCTAGGCTATTCCACTAAGTTACTTATAAACTGGTGGCTTTAAC 3297
Query 1657 -------------------------------------------------------------------------- 1656
Sbjct 3298 TGAGGGCTGTGTAAAGGTACTATTTGGCATGTGAAGTCAGGATAAATTTATCGAATGTCCGTTTTCCACATGCA 3371
Query 1657 -------------------------------------------------------------------------- 1656
Sbjct 3372 ACTGTGTTACAGAAGTAGTAAAATTGGAAGAATCATGTTTATGGTGTTACCACTGATGGAAACACACAAACACC 3445
Query 1657 -------------------------------------------------------------------------- 1656
Sbjct 3446 AAGCTAATAATAAATATATAACTTAAAAAGCTAATTATATGCACTGAAATGGTGGGAATTTTAGTGATGCAGTA 3519
Query 1657 -------------------------------------------------------------------------- 1656
Sbjct 3520 ATTGAGGAGTCTGGAGTTTTGTATTTGGACCAAGAATTATGAGATGAGGATCTTTTTCTGAGTGTTCTAAAGGG 3593
Query 1657 -------------------------------------------------------------------------- 1656
Sbjct 3594 CTTCTTGAGGGGGAGTGGTTTAAAGCACTTCATGAATGATGTGAAGAAGGTACCTTGGGCTGAGACAGCATTCT 3667
Query 1657 -------------------------------------------------------------------------- 1656
Sbjct 3668 AGGTACAGATGGCACTCTGTTCAACCAACTGTGGATGGAAAATATTCTGAAAAAAAATACAATAAAAATTTTAA 3741
Query 1657 ------------- 1656
Sbjct 3742 AAATACAATATAA 3754
