Nucleotide Global Alignment
Description
- Query:
- TRCN0000474481
- Subject:
- NM_001365700.2
- Aligned Length:
- 3490
- Identities:
- 2265
- Gaps:
- 1115
Alignment
Query 1 ATGGCGACCTCCGAGAGGGCTCTCCTGAGGACCAGAGCTGCCTCTCTCCTGAGAGGCTTGGGCAGATCCCGAAC 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGCGACCTCCGAGAGGGCTCTCCTGAGGACCAGAGCTGCCTCTCTCCTGAGAGGCTTGGGCAGATCCCGAAC 74
Query 75 TGGAGCCCGATCGTTACAGTTTCGCGCAGAAAAAGAGCGTCAGCCTTGCTGGTCTTTTCCCATGGGGCAGAAGA 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 TGGAGCCCGATCGTTACAGTTTCGCGCAGAAAAAGAGCGTCAGCCTTGCTGGTCTTTTCCCATGGGGCAGAAGA 148
Query 149 CGAAAGGCAGCTCTAACATAGCCTCCTCCTACCTGCTCCAGCAGCTCATGCACCGCTATCAGGAGCTGGACTCG 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CGAAAGGCAGCTCTAACATAGCCTCCTCCTACCTGCTCCAGCAGCTCATGCACCGCTATCAGGAGCTGGACTCG 222
Query 223 GACGGAGATGAGGACCAGGGCGAGGGCGAGGCGGGATCCGAGGAGTCCTCAGAGTCCGAAATGCTGAATTTGGA 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GACGGAGATGAGGACCAGGGCGAGGGCGAGGCGGGATCCGAGGAGTCCTCAGAGTCCGAAATGCTGAATTTGGA 296
Query 297 GGAGGAATTTGATGGGGTCCTGAGAGAGGAGGCTGTGGCCAAAGCACTCCATCACTTGGGGCGCTCAGGCTCTG 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GGAGGAATTTGATGGGGTCCTGAGAGAGGAGGCTGTGGCCAAAGCACTCCATCACTTGGGGCGCTCAGGCTCTG 370
Query 371 GGACTGAGCAAGTCTACCTCAATCTAACTTTATCAGGTTGTAATTTAATTGATGTTAGCATTCTCTGTGGATAT 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GGACTGAGCAAGTCTACCTCAATCTAACTTTATCAGGTTGTAATTTAATTGATGTTAGCATTCTCTGTGGATAT 444
Query 445 GTTCATCTACAGAAGTTGGATCTTTCAGCGAATAAAATTGAAGATTTATCTTGTGTGAGTTGTATGCCTTATCT 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GTTCATCTACAGAAGTTGGATCTTTCAGCGAATAAAATTGAAGATTTATCTTGTGTGAGTTGTATGCCTTATCT 518
Query 519 CCTAGAACTTAATGCTTCTCAAAATAATTTGACTACGTTCTTCAATTTCAAGCCACCCAAAAACCTCAAGAAAG 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|
Sbjct 519 CCTAGAACTTAATGCTTCTCAAAATAATTTGACTACGTTCTTCAATTTCAAGCCACCCAAAAACCTCAAGAAGG 592
Query 593 CGGATTTTTCCCACAACCAAATTTCTGAAATTTGTGATTTGTCAGCGTATCATGCTCTCACTAAACTAATTTTG 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CGGATTTTTCCCACAACCAAATTTCTGAAATTTGTGATTTGTCAGCGTATCATGCTCTCACTAAACTAATTTTG 666
Query 667 GATGGCAATGAGATAGAAG-AATCAGTGGACTAGAGATGTGCA--CACCTAATTCACCTTAGTTTGGCC-ACAA 736
||||||||||||||||||| ||||||||||||||||||||||| .||||||||||||||||||||||| ||||
Sbjct 667 GATGGCAATGAGATAGAAGAAATCAGTGGACTAGAGATGTGCAACAACCTAATTCACCTTAGTTTGGCCAACAA 740
Query 737 T-AGATCACGAC-ATTAATGGCTTAAACAAGTTACCAATCAAAATACTTTGTTCTGAGCAATAACCAGATTGAG 808
| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 741 TAAGATCACGACAATTAATGGCTTAAACAAGTTACCAATCAAAATACTTTG-TCTGAGCAATAACCAGATTGAG 813
Query 809 ATGATCACAGGTTTGGAGGATCTGAAAGCCCTGCAGAACCTGGATCTGTCCCACAATCAGATAAGCAGCCTCCA 882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 814 ATGATCACAGGTTTGGAGGATCTGAAAGCCCTGCAGAACCTGGATCTGTCCCACAATCAGATAAGCAGCCTCCA 887
Query 883 AGGCTTAGAGAATCATGACCTCCTGGAAGTGATCAACCTGGAGGATAATAAGATTGCTGAGCTGAGAGAAATAG 956
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 888 AGGCTTAGAGAATCATGACCTCCTGGAAGTGATCAACCTGGAGGATAATAAGATTGCTGAGCTGAGAGAAATAG 961
Query 957 AATACATTAAAAATTTACCCATCCTTCGAGTTCTCAATCTTCTAGAAAATCCAATTCAGGAAAAGTCTGAATAT 1030
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 962 AATACATTAAAAATTTACCCATCCTTCGAGTTCTCAATCTTCTAGAAAATCCAATTCAGGAAAAGTCTGAATAT 1035
Query 1031 TGGTTCTTCGTAATTTTTATGCTTCTGCGATTAACAGAATTAGATCAGAAGAAGATTAAAGTGGAAGAAAAGGT 1104
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1036 TGGTTCTTCGTAATTTTTATGCTTCTGCGATTAACAGAATTAGATCAGAAGAAGATTAAAGTGGAAGAAAAGGT 1109
Query 1105 TTCAGCAGTGAATAAATATGATCCTCCCCCTGAAGTGGTTGCAGCTCAAGACCACCTGACCCATGTTGTCAACA 1178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1110 TTCAGCAGTGAATAAATATGATCCTCCCCCTGAAGTGGTTGCAGCTCAAGACCACCTGACCCATGTTGTCAACA 1183
Query 1179 GCGTGATGCAGCCGCAGAGGATCTTTGACAGCACTCTTCCCAGCCTGGATGCTCCTTATCCCATGCTGATACTA 1252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1184 GCGTGATGCAGCCGCAGAGGATCTTTGACAGCACTCTTCCCAGCCTGGATGCTCCTTATCCCATGCTGATACTA 1257
Query 1253 GCTGGTCCTGAAGCTTGTGGGAAACGAGAGCTTGCCCATCGCCTCTGCAGACAGTTTAGCACTTACTTCAGATA 1326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1258 GCTGGTCCTGAAGCTTGTGGGAAACGAGAGCTTGCCCATCGCCTCTGCAGACAGTTTAGCACTTACTTCAGATA 1331
Query 1327 TGGGGCCTGTCATACCACAAGACCACCTTACTTTGGAGAAGGGGATCGAGTTGATTATCATTTTATCTCTCAAG 1400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1332 TGGGGCCTGTCATACCACAAGACCACCTTACTTTGGAGAAGGGGATCGAGTTGATTATCATTTTATCTCTCAAG 1405
Query 1401 ACGTTTTTGATGAAATGGTGAACATGGGGAAATTCATTCTAACATTTAGTTATGGTAATCACAAGTATGGATTA 1474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1406 ACGTTTTTGATGAAATGGTGAACATGGGGAAATTCATTCTAACATTTAGTTATGGTAATCACAAGTATGGATTA 1479
Query 1475 AATAGGGACACCGTAGAAGGTATCGCAAGAGATGGTTTGGCAAGCTGTATTCATATGGAAATAGAAGGTGTAAG 1548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1480 AATAGGGACACCGTAGAAGGTATCGCAAGAGATGGTTTGGCAAGCTGTATTCATATGGAAATAGAAGGTGTAAG 1553
Query 1549 AAGTTTGAAATATTCCTATTTTGAGCCTCGTTATATCCTGGTGGTGCCCATGAACAAGGAAAAATATGAGGGAT 1622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1554 AAGTTTGAAATATTCCTATTTTGAGCCTCGTTATATCCTGGTGGTGCCCATGAACAAGGAAAAATATGAGGGAT 1627
Query 1623 ATTTGCGGAGAAAAGGATTATTCAGTCGTGCAGAAATTGAATTTGCTGTCTCCAGAGTGGACCTTTATAATAAA 1696
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||.||
Sbjct 1628 ATTTGCGGAGAAAAGGATTATTCAGTCGTGCAGAAATTGAATTTGCTGTCTCCAGAGTGGACCTTTAT-ATTAA 1700
Query 1697 AATTAATCAGAATTTTCCGGGGATATTTGAATGAGGTAATCAATGCAGATGATCTGGATG-TGCCTTACAAAAA 1769
|||||||||||||||||| |||||||||..|||||||||||||||||||||||||||||| |||| |||.||||
Sbjct 1701 AATTAATCAGAATTTTCC-GGGATATTTTGATGAGGTAATCAATGCAGATGATCTGGATGTTGCC-TACCAAAA 1772
Query 1770 ACTGAGTCAGCTCATTAGAGAATACCTTGGATGGAATGAGGAACCTGCCAAGAGTTTGGCTACAACTGCAGATG 1843
||||||||||||||||||||||||||||||||.||.|||||||||||||||||||||||||||||||||||..|
Sbjct 1773 ACTGAGTCAGCTCATTAGAGAATACCTTGGATTGACTGAGGAACCTGCCAAGAGTTTGGCTACAACTGCAGCAG 1846
Query 1844 TA------------AAGA------------------CATCCCACCT------------------------GAAA 1863
.| |||| ||.|.||||| ||||
Sbjct 1847 GAGCTCCCGCTAGCAAGAAGACTGTCTCTGGGGTGCCAGCACACCTGGTTCCATCTCCCAGGTGCTTGGCGAAA 1920
Query 1864 CCTG-AAGC------------------GCATC---CTACAAAGTATATT----------TCTTCGAATAT---- 1901
||| |||| ||||| ||..||.|.|.||| .|.|.|||.||
Sbjct 1921 -CTGCAAGCAGATGGCCAGATGACAGAGCATCTCTCTGGAATGCAAATTCATGCCAAGGACCTAGAAAATCAGA 1993
Query 1902 GGGTGATTTCCT-----------------------------------------------GCATTCTACAGACAG 1928
|.|| |..|||| ||.||||.|.|||||
Sbjct 1994 GCGT-AACTCCTGCCCAGAACCAAGAGCTGGCTCAGGATGGAGAAACCCATCAAAAAGAGCTTTCTCCTGACAG 2066
Query 1929 ----------------------AAACTACCTCATTAAAT----TTTGGGCCAAACTT--TCAG-----CCAAAA 1969
.||| ||||||.|..|| ..|||| .||| |||| |||..|
Sbjct 2067 CCATCTCAATCCTGAGCTCCCTCAAC-ACCTCAGTTCATCAGCACTGGG----TCTTCCTCAGCAGGCCCAGGA 2135
Query 1970 ---------AAACACCAGCGGAA-----------------AGAGATT---CTATACACAGACAG-CAC-GAGGC 2012
|||| |||.||||| |||..|| ||| |.|||.|.|| ||| |||.|
Sbjct 2136 CCTATCCCTAAAC-CCAACGGAAGAGGATGTCCAACAATCAGATCTTCCCCTA-AAACAAATAGCCACTGAGAC 2207
Query 2013 AG----CCCGGCAAGCTCTAA-----------TGGGAAGGATACGCCCTGATCACAC-----------ACTCCT 2060
|| |||.| ||.|..|| ||||.|| .|.||| |||||.| .|||||
Sbjct 2208 AGATGTCCCTG--AGGTGGAAGCCAGTGAGGTTGGGCAG---TCTCCC--ATCACCCCGACCCTGGTGCCTCCT 2274
Query 2061 AT------TTC------------------------------------AAAGGGGTC----CAGTACCAG----- 2083
.| ||| .||||.||| .||..||||
Sbjct 2275 GTGCACCCTTCCCCTCCCTCGTCCCGCAGCCCTCAGCCAGGCCAGGACAAGGAGTCAGGGGAGGCCCAGGTAAC 2348
Query 2084 -----------CACCTCTCACCAGTGGTCTACACTATTATACA-------------ACT-----------TTAG 2122
|.||||| ||||..|| .|.|||| ||| |.||
Sbjct 2349 CCCTACTGGCCCTCCTCT--------GTCTGAAC--CTCTACAGGGACCTGGCCCCACTCCCCTCAGCCCTCAG 2412
Query 2123 AAGAACTCTGGA-----AAAGTTTTGA-TCTTTGTGAAGACTATTTTAAACCTCCA--------TTTGGACCAT 2182
||||.||.||| ||| |||| || |||| ||||.|||| ||...|||||
Sbjct 2413 -AGAATTCAGGATGAGGAAA---TTGAGTC-------AGAC------AAACTTCCACCCAGCAGTTCCCACCAT 2469
Query 2183 -ATCCT-GAAAAGAGTGGGAAGGATTC------------CTTGGTTTCCATGAAA--TGTT--CATTGTTTC-- 2236
||||| .|||| ||||| ||||| |.|| |||| ||.| | |.|||
Sbjct 2470 GATCCTCCAAAA----------GATTCTTCCCACACTGACTTGG--TGCA-GAAACTTGCTGGC---GATTCTC 2527
Query 2237 ----GGTTCTG----------------------------TCCGTGGTCA-----------AAAGAATTGC---- 2263
.|.|||| |||| .|||| ..||||.|||
Sbjct 2528 AGCAAGCTCTGAAGGAGGAAACCTCCAAACCGGAAGCCATCCG-AGTCAGTATCCCTCACCCAGAACTGCCACA 2600
Query 2264 ---------CTT--------------TCCAGCCTCCGG--AGGGGAG---------CATTTCTTCACACCTAGG 2303
||| ..|||||.|.|| ||||||| |.||.||| |||||.
Sbjct 2601 TCCCCAAGACTTAGCAACAGATACCAAGCAGCCCCAGGCCAGGGGAGCCCCGGGGACCTTGCTT----CCTAGA 2670
Query 2304 A-------------------------------TCAGGAG-----------CCAGTGACAGTGAGACCGAAGAGA 2335
| |||||.| ||||.| ||| |||.|| .|.|
Sbjct 2671 AGCCGGCTGGCTCCCACTCGGCTGCCCCAGCCTCAGGTGCTGGCTCCCCTCCAGAG-CAG-GAGGCC---CACA 2739
Query 2336 CCCGGAAAGCACTACCTAT--------------------------ACAATCATTTTCACATGAAA--AAGA--G 2379
||| || ||| ||||| ||||.| ||.|||.||| |.|| |
Sbjct 2740 CCC--AA---ACT-CCTATCGCCCAGCAGGGAAGAGGCTTTAGGAACAACC----TCCCATCAAACCATGACGG 2803
Query 2380 TCT------------CACCAAC-------ACAGACA-----ACACTCGGTCCCAGTCATCAGTCGCCCAGGTTC 2429
||| ||||||| .|||||| |.|||...||||| ||| |||| ||
Sbjct 2804 TCTCTCCCAGGCTTCCACCAACCCGGGAAGCAGACACCAGTAAACTTCCTCCCA-TCA------GCCC----TC 2866
Query 2430 C-AACGTCAAACCCACCCTCCC---TCCAATCCCTCAGG--GCC-----------GCAGG-------------- 2472
| .|| |||||.||||| .|| ||..|.|||.|||| ||| |||.|
Sbjct 2867 CGCAC-TCAAAACCACC--ACCAAATCTGAGCCCCCAGGCAGCCCACAGTCTTCAGCAAGTCCAGGAAGAGAAG 2937
Query 2473 -------------------------------------------------------------------------- 2472
Sbjct 2938 GTCAGTGAGGTGAAACTCCCTCTTATCAGTCCCCCCAGCCAGGAGCAAGCAGAACCTCGCATCCTCAGTCCCGC 3011
Query 2473 -------------------------------------------------------------------------- 2472
Sbjct 3012 CCAGGAGGAGGCGGCTCAGAAAGTGAGGCTCCCTCGCATTCCTGCTCCTCTTCCGGAGCCAGGGCTGCCCCAGA 3085
Query 2473 -------------------------------------------------------------------------- 2472
Sbjct 3086 ACTCGGGGACTCAGCCTGATCCAAGGCCTGCAAAGGAAAGGAAAGCTCCCCAAGCAGGCAGCTCCTCCAGGAGG 3159
Query 2473 -------------------------------------------------------------------------- 2472
Sbjct 3160 AAGATTCCAGACATGCGGGCCTCACCCCACAACCAGGGGCCACTTCAGCAGACAGGGGCTAGGGAAAAAAAGCT 3233
Query 2473 -------------------------------------------------------------------------- 2472
Sbjct 3234 CCCCAACCAGAAAGGGACGGCTAGAGGACTGGCACCTCTGGAAGAGGCACCACCTGGGAACCACCAGCCAGCCT 3307
Query 2473 -------------------------------------------------------------------------- 2472
Sbjct 3308 TGCAGCTAGAACCCCACGATCAGCCAGCTCCCACCATGGTGCCCGACGATCCCAACCCCAGCCCTCCTCTTGTT 3381
Query 2473 ------------ 2472
Sbjct 3382 TCTTGTCTAAGC 3393