Nucleotide Global Alignment
Description
- Query:
- TRCN0000474486
- Subject:
- XR_941483.1
- Aligned Length:
- 2084
- Identities:
- 1184
- Gaps:
- 897
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTCTTGTAGTGGCGCCGGCTTGCATCCCAGGTCGTGGCGGTTTTGGTGCCTGAAGCAGGGAGCGCGGAGTCGTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCCGAGAGAGGCGGCCAGGCTATGCTCGCCGGTTTCCGGCGTTCCGCTCCGGCCAGCCAGAGTCTCTGTCTCAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCTGTGTCCGTGCTCCAGCAGTCTCCTCAGCCCGGCCCCGCGGCGCGGTTGGCGGCGGCGCCCCAGGCGCGCCC 222
Query 1 ---------ATGGCGGCGGAGATCCAGCCCAAGCCTCTGACCCGCAAGCCGATCCTGCTGCAGCGGATGGAGGG 65
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CCTCCTCCGATGGCGGCGGAGATCCAGCCCAAGCCTCTGACCCGCAAGCCGATCCTGCTGCAGCGGATGGAGGG 296
Query 66 GTCCCAGGAGGTGGTGAATATGGCCGTGATCGTGCCCAAAGAGGAGGGCGTCATCAGCGTCTCCGAGGACAGGA 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GTCCCAGGAGGTGGTGAATATGGCCGTGATCGTGCCCAAAGAGGAGGGCGTCATCAGCGTCTCCGAGGACAGGA 370
Query 140 CAGTTCGTGTTTGGTTAAAGAGAGACAGTGGACAGTATTGGCCAAGCGTATACCATGCAATGCCTTCTCCATGT 213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CAGTTCGTGTTTGGTTAAAGAGAGACAGTGGACAGTATTGGCCAAGCGTATACCATGCAATGCCTTCTCCATGT 444
Query 214 TCATGCATGTCTTTTAACCCGGAAACAAGAAGACTGTCCATAGGTCTAGACAATGGTACAATCTCAGAGTTTAT 287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TCATGCATGTCTTTTAACCCGGAAACAAGAAGACTGTCCATAGGTCTAGACAATGGTACAATCTCAGAGTTTAT 518
Query 288 ATTGTCAGAAGATTATAACAAGATGACTCCTGTGAAAAACTATCAAGCGCATCAGAGCAGAGTGACGATGATCC 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 ATTGTCAGAAGATTATAACAAGATGACTCCTGTGAAAAACTATCAAGCGCATCAGAGCAGAGTGACGATGATCC 592
Query 362 TGTTTGTCCTGGAGCTGGAGTGGGTGCTGAGCACAGGACAGGACAAGCAATTTGCCTGGCACTGCTCTGAGAGT 435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TGTTTGTCCTGGAGCTGGAGTGGGTGCTGAGCACAGGACAGGACAAGCAATTTGCCTGGCACTGCTCTGAGAGT 666
Query 436 GGGCAGCGCCTGGGAGGTTATCGGACCAGTGCTGTGGCCTCAGGCCTGCAATTTGATGTTGAAACCCGGCATGT 509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GGGCAGCGCCTGGGAGGTTATCGGACCAGTGCTGTGGCCTCAGGCCTGCAATTTGATGTTGAAACCCGGCATGT 740
Query 510 GTTTATCGGTGACCACTCAGGCCAAGTAACAATCCTCAAACTGGAGCAAGAAAACTGCACCCTGGTCACAACAT 583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GTTTATCGGTGACCACTCAGGCCAAGTAACAATCCTCAAACTGGAGCAAGAAAACTGCACCCTGGTCACAACAT 814
Query 584 TCAGAGGACACACAGGTGGGGTGACCGCTCTCTGTTGGGACCCAGTCCAGCGGGTGTTGTTCTCAGGCAGTTCA 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TCAGAGGACACACAGGTGGGGTGACCGCTCTCTGTTGGGACCCAGTCCAGCGGGTGTTGTTCTCAGGCAGTTCA 888
Query 658 GATCACTCTGTCATCATGTGGGACATCGGTGGGAGAAAAGGAACAGCCATCGAGCTCCAAGGACACAACGACAG 731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GATCACTCTGTCATCATGTGGGACATCGGTGGGAGAAAAGGAACAGCCATCGAGCTCCAAGGACACAACGACAG 962
Query 732 AGTCCAGGCCCTCTCCTATGCACAGCACACGCGACAATTGATCTCCTGTGGCGGTGATGGTGGGATTGTCGTCT 805
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 AGTCCAGGCCCTCTCCTATGCACAGCACACGCGACAATTGATCTCCTGTGGCGGTGATGGTGGGATTGTCGTCT 1036
Query 806 GGAACATGGACGTGGAGAGGCAGGAGACCCCTGAATGGTTGGACAGTGATTCCTGCCAAAAGTGTGATCAGCCT 879
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GGAACATGGACGTGGAGAGGCAGGAGACCCCTGAATGGTTGGACAGTGATTCCTGCCAAAAGTGTGATCAGCCT 1110
Query 880 TTCTTCTGGAACTTCAAGCAAATGTGGGACAGTAAGAAAATTGGTCTAAGACAGCACCACTGCCGCAAGTGTGG 953
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TTCTTCTGGAACTTCAAGCAAATGTGGGACAGTAAGAAAATTGGTCTAAGACAGCACCACTGCCGCAAGTGTGG 1184
Query 954 GAAGGCCGTCTGTGGCAAGTGCAGCTCCAAGCGCTCCTCCATCCCCCTGATGGGCTTCGAGTTTGAAGTGAGGG 1027
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GAAGGCCGTCTGTGGCAAGTGCAGCTCCAAGCGCTCCTCCATCCCCCTGATGGGCTTCGAGTTTGAAGTGAGGG 1258
Query 1028 TCTGTGACAGCTGCCACGAGGCCATCACAGATGAAGAACGTGCACCCACAGCCACCTTCCATGACAGTAAACAT 1101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TCTGTGACAGCTGCCACGAGGCCATCACAGATGAAGAACGTGCACCCACAGCCACCTTCCATGACAGTAAACAT 1332
Query 1102 AACATTGTGCATGTGCATTTCGATGCAACCAGAGGATGGTTACTGACTTCTGGAACTGACAAGGTTATTAAGTT 1175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 AACATTGTGCATGTGCATTTCGATGCAACCAGAGGATGGTTACTGACTTCTGGAACTGACAAGGTTATTAAG-- 1404
Query 1176 GTGGGATATGACC-------CCAGTC-GTGTCT----------------------------------------- 1200
|| |||.|| |.|.||
Sbjct 1405 -----------CCCACAGAGCCACTCAGAGGCTGAAGCCACTTCACAGCCCACTGGTGTTGAGAATCATCATCA 1467
Query 1201 -------------------------------------------------------------------------- 1200
Sbjct 1468 GAAAACCAGATATGTCAAGGTGCTGTCATTTTGCAAAAGGAAATCTTTATATGAAATGTACAAAAACCGTTACT 1541
Query 1201 -------------------------------------------------------------------------- 1200
Sbjct 1542 AACTGGACAACAGGGAAGGTGCTGGCCCCACATTAGTGCCTGCCCACCGCTCTACTTCTAACCAGGGACACGGA 1615
Query 1201 -------------------------------------------------------------------------- 1200
Sbjct 1616 TCTTCCATTCTCTACATCCACCGGACTGCAGCCCAAGTCTGGACCTGGCTGCAGTGGGCATATTACCGTATGGA 1689
Query 1201 -------------------------------------------------------------------------- 1200
Sbjct 1690 TATCTTTTTCTTTCTTTTTTTAAAGTGAGGAGATTCTTCAGGGGGTCAGGCTGAGAATGTAATAAGCCTGACAT 1763
Query 1201 -------------------------------------------------------------------------- 1200
Sbjct 1764 TGGAACAGATTTCTCCCGTGTGGTCTAGCTGGACCCCTCCGGCATTTGCCACACTCCCTGCCAGTCCTGACATT 1837
Query 1201 -------------------------------------------------------------------------- 1200
Sbjct 1838 GACTTCCTGAATGTGATTAGGTGGTAATGAGCAAGAATTTCCTAGGATATTGAAACATCTGTATCCAGGCCCCC 1911
Query 1201 -------------------------------------------------------------------------- 1200
Sbjct 1912 AATCAAATGCTGCTGAATATTGTGAATGTTTTTACTCCGCTCACTTTCCCACTGTGCTTTCCTCTAACCAAAAT 1985
Query 1201 -------------------------------------------------------------------------- 1200
Sbjct 1986 ATACGTGTAGCCATTACCAATGTACAACTCTCAATGCGGAGTTGCCGCCACGGTTTAAAATAAATCTCTGTGAA 2059
Query 1201 ------------ 1200
Sbjct 2060 AACCTTTCTGCA 2071
