Nucleotide Global Alignment

Description

Query:
TRCN0000474578
Subject:
NR_134881.1
Aligned Length:
3039
Identities:
834
Gaps:
2205

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  TTTTGAGATGGAGTCTTGCCCTGTCGCCCAGGCTGGAGTGCAATGGCGTGATCTCGGCTCACTGCAACCTCCAT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CTCCCAGGTTCAAGCAATTCTCCTGCCTCCACCTCCCGAGTAGCTGGGATTACAGGCGTGTGCCACCACGCCCG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCTAACTTTTTGTATCTTTAGTAGAGATGGGGTTTCAGCATCTTGGCCAGGCTGGTCTTGAACTCCTGACCTCG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TGATCCACCTACCTCGGCCTTCCAAAGTGCTGGAATTATAGGCGTGAGCCACCAAGCCCGGCCTCCTCTTTATT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TTTTATTTTGATTTATTTATTTTTGAGATGGGGGGGGTGTCTCGCTATGTTGACCAGGCTGGTCTCGAACTCCT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GGCCTCAAGCAGTTCTCCCTTCTTGGCCTCCCAAAGTGCTGGGATTACAGACATTAGCCACGGCGCCTGGCCTT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TTTCTTCTTCTTCTTCTTTGTTGAGACAGGGTCTCAATCTGTTGCCCAGGCTGGTCTCCAACTCCTGGGCTCAG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GTGATCCTTCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCATTAAGTGTTCCCCTTAATGACA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CAGCAGATGAGAGTTTTACTGAGTATCTCCTTGTGCCAGGCACCCTGTTGTTGCTGGGGAAGCGGAAGGGAGAG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  ACAATCGTTAATCGGCTAAATTTCTGCCTTCTGAGAGCTCAGAATCAAGAAATAAATAATAGGGCAGTAAAAGG  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GGCTGGGATTACATACAAAAAGAAAATTAATGCCTGAACTTTTTACAATCTGCTCGATAAGCTTTAATTCTATT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  AACCTATTTGAGCTTCCCAACAACAGGCAAGCTCCCACAGCAGCTAGGAGGATCACTTTGTCGTCATACAAATA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GAAACAGGCTCAGAGAGGAAGTCATTTGTTCTAGTTCTCACTAGGACAAATCTACTGGCTACTAAAAAAGTGTG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AAGGCTGGGGACAGTTTGAGTCGTCCTGCTTGCACCTTAAGCGCCTACAAGAGTGCCCGGCTATAACAACCACA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  ATACCAATAATAAAATTTAAAAACAGATGTTCAGTAAGGACTTGCGGCATTAGGACCCCAGGAGGGAAGTGACG  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TTCGAGGAGGCGGAGAAAGCCGCGAAGACGGCCTTCCCCACATCTTCCAGCACCTGCGCGCCTGAATCCGTCCC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  ACCCAGGCCCAGACGCAGGCTTCTTCTCGGGTCTTGGTCCTGCATCCTCTCTCTCCCAGAGCCTCCGTTAGGGG  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  GTGGGAAAGGACTTTGCCATAGGTCGCTGAGGCCACCATCTGCTCTCTTACTGGCCAAGGGCGTAAAAAGATAG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  TCTTCCCATTAGCTAGAGAGCAAACCCCAGAAAGCCTATTGGCTGCGCCGTCCGCGGGCCTTGGTCCGCTTTGA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  AGGCGGGCTGCGGCTGCGAGAGGAGGGCGGGCGGGAGGCTAGCTGTTGTCGTGGTTGCTCGGAGGCACGTGTGC  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  AGTCCCGGAAGCGGCGAGGGGAAACTGCTCCGCGCGCGCCGCGGGAGGAGGAACCGCCCGGTCCTTTAGGGTCC  1554

Query    1  ---------------ATGGATTCAATGCCTGAGCCCGCGTCCCGCTGTCTTCTGCTTCTTCCCTTGCTGCTGCT  59
                           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  GGGCCCGGCCGGGCCATGGATTCAATGCCTGAGCCCGCGTCCCGCTGTCTTCTGCTTCTTCCCTTGCTGCTGCT  1628

Query   60  GCTGCTGCTGCTGCTGCCGGCCCCGGAGCTGGGCCCGAGCCAGGCCGGAGCTGAGGAGAACGACTGGGTTCGCC  133
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  GCTGCTGCTGCTGCTGCCGGCCCCGGAGCTGGGCCCGAGCCAGGCCGGAGCTGAGGAGAACGACTGGGTTCGCC  1702

Query  134  TGCCCAGCAAATGCGAA---------------------------------------------------------  150
            |||||||||||||||||                                                         
Sbjct 1703  TGCCCAGCAAATGCGAAGGCTTGCGCCGGGACGCTGCGGCGGACGAGAGATCTGGTCCCGGTACCCCTGGAGTT  1776

Query  151  --------GTGTGTAAATATGTTGCTGTGGAGCTGAAGTCAGCCTTTGAGGAAACCGGCAAGACCAAGGAGGTG  216
                    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  CACACATTGTGTGTAAATATGTTGCTGTGGAGCTGAAGTCAGCCTTTGAGGAAACCGGCAAGACCAAGGAGGTG  1850

Query  217  ATTGGCACGGGCTATGGCATCCTGGACCAGAAGGCCTCTGGAGTCAAATACACCAAGTC---------------  275
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||               
Sbjct 1851  ATTGGCACGGGCTATGGCATCCTGGACCAGAAGGCCTCTGGAGTCAAATACACCAAGTCCATTTCAGATCCCCC  1924

Query  276  -----------------------------------------------GGACTTGCGGTTAATCGAAGTCACTGA  302
                                                           |||||||||||||||||||||||||||
Sbjct 1925  AGACCAGATGACCTATCTTCCTTCCAGCTCTGAGTCACTTCCCATTGGGACTTGCGGTTAATCGAAGTCACTGA  1998

Query  303  GACCATTTGCAAGAGGCTCCTGGATTATAGCCTGCACAAGGAGAGGACCGGCAGCAATCGATTTGCCAAGGGCA  376
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999  GACCATTTGCAAGAGGCTCCTGGATTATAGCCTGCACAAGGAGAGGACCGGCAGCAATCGATTTGCCAAGGGCA  2072

Query  377  TGTCAGAGACCTTTGAGACATTACACAACCTGGTACACAAAGGGGTCAAGGTGGTGATGGACATCCCCTATGAG  450
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073  TGTCAGAGACCTTTGAGACATTACACAACCTGGTACACAAAGGGGTCAAGGTGGTGATGGACATCCCCTATGAG  2146

Query  451  CTGTGGAACGAGACTTCTGCAGAGGTGGCTGACCTCAAGAAGCAGTGTGATGTGCTGGTGGAAGAGTTTGAGGA  524
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147  CTGTGGAACGAGACTTCTGCAGAGGTGGCTGACCTCAAGAAGCAGTGTGATGTGCTGGTGGAAGAGTTTGAGGA  2220

Query  525  GGTGATCGAGGACTGGTACAGGAACCACCAGGAGGAAGACCTGACTGAATTCCTCTGCGCCAACCACGTGCTGA  598
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221  GGTGATCGAGGACTGGTACAGGAACCACCAGGAGGAAGACCTGACTGAATTCCTCTGCGCCAACCACGTGCTGA  2294

Query  599  AGGGAAAAGACACCAGTTGCCTGGCAGAGCAGTGGTCCGGCAAGAAGGGAGACACAGCTGCCCTGGGAGGGAAG  672
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295  AGGGAAAAGACACCAGTTGCCTGGCAGAGCAGTGGTCCGGCAAGAAGGGAGACACAGCTGCCCTGGGAGGGAAG  2368

Query  673  AAGTCCAAGAAGAAGAGCAGCAGGGCCAAGGCAGCAGGCGGCAGGAGTAGCAGCAGCAAACAAAGGAAGGAGCT  746
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369  AAGTCCAAGAAGAAGAGCAGCAGGGCCAAGGCAGCAGGCGGCAGGAGTAGCAGCAGCAAACAAAGGAAGGAGCT  2442

Query  747  GGGTGGCCTTGAGGGAGACCCCAGCCCCGAGGAGGATGAGGGCATCCAGAAGGCATCCCCTCTCACACACAGCC  820
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443  GGGTGGCCTTGAGGGAGACCCCAGCCCCGAGGAGGATGAGGGCATCCAGAAGGCATCCCCTCTCACACACAGCC  2516

Query  821  CCCCTGATGAGCTC------------------------------------------------------------  834
            ||||||||||||||                                                            
Sbjct 2517  CCCCTGATGAGCTCTGAGCCCACCCAGCATCCTCTGTCCTGAGACCCCTGATTTTGAAGCTGAGGAGTCAGGGG  2590

Query  835  --------------------------------------------------------------------------  834
                                                                                      
Sbjct 2591  CATGGCTCTGGCAGGCCGGGATGGCCCCGCAGCCTTCAGCCCCTCCTTGCCTTGGCTGTGCCCTCTTCTGCCAA  2664

Query  835  --------------------------------------------------------------------------  834
                                                                                      
Sbjct 2665  GGAAAGACACAAGCCCCAGGAAGAACTCAGAGCCGTCATGGGTAGCCCACGCCGTCCTTTCCCCTCCCCAAGTG  2738

Query  835  --------------------------------------------------------------------------  834
                                                                                      
Sbjct 2739  TTTCTCTCCTGACCCAGGGTTCAGGCAGGCCTTGTGGTTTCAGGACTGCAAGGACTCCAGTGTGAACTCAGGAG  2812

Query  835  --------------------------------------------------------------------------  834
                                                                                      
Sbjct 2813  GGGCAGGTGTCAGAACTGGGCACCAGGACTGGAGCCCCCTCCGGAGACCAAACTCACCATCCCTCAGTCCTCCC  2886

Query  835  --------------------------------------------------------------------------  834
                                                                                      
Sbjct 2887  CAACAGGGTACTAGGACTGCAGCCCCCTGTAGCTCCTCTCTGCTTACCCCTCCTGTGGACACCTTGCACTCTGC  2960

Query  835  --------------------------------------------------------------------------  834
                                                                                      
Sbjct 2961  CTGGCCCTTCCCAGAGCCCAAAGAGTAAAAATGTTCTGGTTCTGATTTCTGAGTCCTCTGCAGCCCTCAAAAAA  3034

Query  835  -----  834
                 
Sbjct 3035  AAAAA  3039

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