Nucleotide Global Alignment

Description

Query:
TRCN0000474581
Subject:
XM_006525949.1
Aligned Length:
3231
Identities:
1814
Gaps:
1173

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGAGGCCTTTACGGAAAAGCGTTTGAGGATTCCACAAGCATCGGGTCTTAATGTGGAAATGAGTTCCCAGCA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GTTTCCTCGGTTAGGAACCCCTTCCCCTGGGCTTAGCCAGCCACCTTCACAGATTGCAAGCAGTGGTTCCGCAG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GACTGATAAACCAAGTTGCCACAGTTAATGATGAGGCTGGCCGAGATGCTGATGTTGGTACCAGGGAGCACGTG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GGCCCTAGCAGCTCCCTGCCGCCCCGGGAAGAGAAGCAGGAGCCAGTTGTGGTAAGGCCCTATCCACAGGTACA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GATGCTGCCTGCACACCATGCTGTCGCCTCAGCCACCCCTGTCGCAGTGACAGCCCCGCCAGCACACCTGACAC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CAGCAGTACCACTCTCTTTTTCGGAAGGACTTATGAAGCCGCCCCCGAAGCCTACCATGCCTAGCCGTCCCATT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GCGCCTGCTCCCCCTTCTACCATGTCACTTCCCCCGAAAGTTCCCGGGCAGGTTACTGTTACCATGGAGAGCAG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CATCCCTCAAGCTTCAGCCATTCCCGTGGCAACAATCAGTGGACAACAGGGGCATCCCAGTAACCTGCATCACA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TTATGACCACAAATGTGCAGATGTCCATAATCCGCAGCAACGCTCCCGGGCCCCCACTTCACATTGGAGCTTCC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CACTTACCTCGAGGTGCAGCTGCTGCCGCTGTGATGTCCAGCTCTAAAGTAACTACAGTCCTGAGGCCAACTTC  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  ACAGCTGCCAAATGCTGCTACGGCGCAGCCAGCAGTACAGCACCTCATTCACCAGCCAATCCAGTCTCGGCCAC  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CTGTGACCACCTCCAGTACAATCCCTCCTGCTGTAGTAGCAACAGTCTCAGCCACCAGAGCGCAGTCTCCTGTC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  ATCACTACGACAGCGGCCCACGCGGCTGACTCGACGCTCAGTCGGCCCACTTTATCTATCCAGCATCCACCATC  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  TGCAGCCATTAGTATCCAGCGTCCTGCACAGTCTCGAGATGTGACAACAAGAATCACACTACCTTCTCATCCTG  1036

Query    1  --------------------------------ATGGCTCAGAAAACAATCTTCAGTACTGGCACGCCAGTGGCT  42
                                            ||||||||||||||.|||||.|||||||||||.|||||||||
Sbjct 1037  CGTTAGGGACTCCGAAACAGCAGCTCCATACAATGGCTCAGAAAACCATCTTTAGTACTGGCACACCAGTGGCT  1110

Query   43  GCAGCCACAGTAGCACCTATTTTGGCAACCAACACCATTCCTTCAGCGACCACAGCTGGATCTGTGTCACACAC  116
            |||||.|||||||||||||||.|||||||||||||..||||||||.|.||||||||||||||||||||.|||||
Sbjct 1111  GCAGCTACAGTAGCACCTATTCTGGCAACCAACACGCTTCCTTCAACAACCACAGCTGGATCTGTGTCGCACAC  1184

Query  117  GCAAGCTCCCACAAGTACCATTGTTACCATGACAGTACCCTCCCATTCCTCCCATGCTACTGCTGTGACCACCT  190
            .|||||||||||||||||.|||||||||||||||.|.|||||||||||.|||||||||||||||||||||||.|
Sbjct 1185  ACAAGCTCCCACAAGTACAATTGTTACCATGACAATGCCCTCCCATTCATCCCATGCTACTGCTGTGACCACTT  1258

Query  191  CAAACATCCCAGTCGCCAAGGTGGTGCCCCAGCAGATCACGCACACTTCTCCTCGGATCCAGCCAGACTACCCT  264
            ||||.||||||||.||.|||||||||||||||||||||||.||||||||.||||||||||||||.||.||||||
Sbjct 1259  CAAATATCCCAGTTGCTAAGGTGGTGCCCCAGCAGATCACACACACTTCCCCTCGGATCCAGCCTGATTACCCT  1332

Query  265  GCCGAGAGGAGTAGCCTGATTCCCATCTCCGGACATCGGGCCTCTCCCAATCCTGTGGCCATGGAAACCCGAAG  338
            .|.|||||||||||||||||||||||.|||||.||||||||||||||.|||||.|||||||||||||||||||.
Sbjct 1333  CCAGAGAGGAGTAGCCTGATTCCCATTTCCGGCCATCGGGCCTCTCCAAATCCAGTGGCCATGGAAACCCGAAA  1406

Query  339  TGACAACAGACCGTCTGTTCCCGTTCAGTTCCAATATTTTTTGCCAACTTACCCCCCTTCTGCATACCCACTGG  412
            ||||||||||||.||.|||||.|||||||||||.||.||.||||||||||||||.||.|||||.|||||.||||
Sbjct 1407  TGACAACAGACCTTCCGTTCCTGTTCAGTTCCAGTACTTCTTGCCAACTTACCCACCCTCTGCCTACCCGCTGG  1480

Query  413  CGGCACATACCTACACCCCAATCACCAGTTCCGTGTCCACTATCCGACAGTATCCAGTTTCAGCTCAGGCTCCA  486
            |.|||||.|||||||||||.||||||||.||.||||||||||||||.|||||.||||||||.|||||.||.|||
Sbjct 1481  CTGCACACACCTACACCCCCATCACCAGCTCTGTGTCCACTATCCGGCAGTACCCAGTTTCTGCTCAAGCCCCA  1554

Query  487  AACTCTGCCATCACAGCTCAGACTGGTGTTGGGGTAGCGTCTACCGTCCACCTAAACCCCATGCAGTTGATGAC  560
            |||||..|||||||||||||.|||||||||||.|||||.|||||.||||||||.||||||||||||.|||||||
Sbjct 1555  AACTCCACCATCACAGCTCAAACTGGTGTTGGTGTAGCATCTACAGTCCACCTGAACCCCATGCAGCTGATGAC  1628

Query  561  AGTGGATGCATCGCATGCTCGACATATTCAAGGGATCCAGCCAGCACCCATCAGTACCCAGGGTATCCAGCCGG  634
            |||||||||.||.|||||.||||||||.||.||||||||||||||||||||||||||.|||||.||||||||.|
Sbjct 1629  AGTGGATGCCTCACATGCCCGACATATCCAGGGGATCCAGCCAGCACCCATCAGTACACAGGGAATCCAGCCAG  1702

Query  635  CCCCCATTGGGACCCCAGGGATACAGCCTGCACCACTTGGCACACAGGGAATTCACTCAGCAACCCCAATCAAC  708
            |||||||||||||..|||||||.|||||.||||||.|||||||.|..|||||.||.||||||.|||||||||||
Sbjct 1703  CCCCCATTGGGACATCAGGGATCCAGCCAGCACCAATTGGCACCCCAGGAATCCATTCAGCAGCCCCAATCAAC  1776

Query  709  ACACAAGGGCTTCAGCCTGCACCTATGGGTACTCAGCAGCCTCAGCCTGAAGGAAAGACTTCAGCAGTGGTGTT  782
            ||.||.|||||||||||.|||.|.||||.||.|||||||||.||||||||.||.||.||.||||||||||||||
Sbjct 1777  ACTCAGGGGCTTCAGCCAGCAGCAATGGCTAATCAGCAGCCACAGCCTGAGGGGAAAACCTCAGCAGTGGTGTT  1850

Query  783  GGCAGATGGAGCCACAATTGTGGCCAACCCTATTAGCAATCCATTCAGTGCTGCTCCAGCAGCAACAACCGTGG  856
            ||||||||||||.||||||||.|||||||||||||||||.||||||||||||||||||||.|||||.||.||||
Sbjct 1851  GGCAGATGGAGCTACAATTGTAGCCAACCCTATTAGCAACCCATTCAGTGCTGCTCCAGCGGCAACCACAGTGG  1924

Query  857  TGCAGACCCACAGCCAGAGTGCTAGCACCAACGCTCCCGCCCAGGGCTCATCGCCACGGCCAAGCATACTCCGG  930
            |.|||||.|||||.||||||||||||||||||.|.||.|||||||||||.||.||.|||||.||||||||.|||
Sbjct 1925  TCCAGACACACAGTCAGAGTGCTAGCACCAACACACCAGCCCAGGGCTCTTCTCCCCGGCCCAGCATACTGCGG  1998

Query  931  AAGAAACCTGCCACAGAT--------------------------------------------------------  948
            ||||||||||||||||||                                                        
Sbjct 1999  AAGAAACCTGCCACAGATGGGATGGCAGTCCGGAAAACTCTCCTCCCTCCTCAGCCTCCTGACGTGGCTACTCC  2072

Query  949  -------------------------------------------------GGTGCCAAACCCAAGTCTGAAATCC  973
                                                             |||||||||||.||.||.|||.|.|
Sbjct 2073  TCGAGTAGAAAGCTCTATGCGGAGTGCTTCTGGGTCACCTAGACCTGCAGGTGCCAAACCTAAATCCGAAGTGC  2146

Query  974  ACGTGTCTATGGCCACTCCGGTCACTGTGTCCATGGAGACTGTATCCAATCAAAATAATGATCAGCCTACCATT  1047
            |.||||||||.||||||||.||.||.||||||.|||||||..||||||||||||||...||.|||||||||.||
Sbjct 2147  ATGTGTCTATAGCCACTCCAGTTACAGTGTCCTTGGAGACCATATCCAATCAAAATGCCGAACAGCCTACCGTT  2220

Query 1048  GCCGTCCCTCCAACTGCCCAGCAGCCCCCACCGACCATTCCAACTATGATTGCAGCAGCCAGTCCCCCGTCACA  1121
            ||.||||||||.||||||||||||||.||||||||||||||.|..||||||||.|||||||||||.||.||.||
Sbjct 2221  GCTGTCCCTCCGACTGCCCAGCAGCCTCCACCGACCATTCCCAGCATGATTGCGGCAGCCAGTCCTCCATCCCA  2294

Query 1122  ACCAGCCGTTGCCCTTTCAACCATTCCTGGAGCGGTCCCCATCACTCCACCCATCACCACCATTGCAGCTGCAC  1195
            |||||||.||||||||||.||||||||.|||||.||.||..|||||||||||||||||||||||||.||..|||
Sbjct 2295  ACCAGCCATTGCCCTTTCCACCATTCCCGGAGCCGTGCCTGTCACTCCACCCATCACCACCATTGCTGCCACAC  2368

Query 1196  CACCTCCATCAGTCACTGTGGGTGGCAGTCTTTCCTCCGTCTTGGGCCCTCCCGTTCCTGAAATTAAAGTGAAA  1269
            ||.|.|..||||.|.|.|||||.||||.||.||||.|.|||.||||.|||||.||||||||.||.||||||||.
Sbjct 2369  CAACGCTGTCAGCCCCAGTGGGCGGCACTCCTTCCACGGTCCTGGGGCCTCCTGTTCCTGAGATCAAAGTGAAG  2442

Query 1270  GAAGAAGTAGAACCAATGGATATCATGAGGCCAGTTTCTGCAGTTCCTCCACTGGCTACCAACACTGTGTCTCC  1343
            |||||||..||.|||.||||.||||..|||||.||.||..||||.|||||.|||||.||||||||.||||||||
Sbjct 2443  GAAGAAGCGGAGCCAGTGGACATCACCAGGCCTGTCTCCACAGTCCCTCCTCTGGCCACCAACACGGTGTCTCC  2516

Query 1344  ATCTCTTGCATTGCTGGCAAACAACTTGTCCATGCCTACAAGTGACCTACCACCTGGTGCCTCCCCAAGGAAAA  1417
            |||||||||.||||||||||.||||.|||||||||||.||||||||||.|||||||||||||||||||||||||
Sbjct 2517  ATCTCTTGCTTTGCTGGCAAGCAACCTGTCCATGCCTCCAAGTGACCTCCCACCTGGTGCCTCCCCAAGGAAAA  2590

Query 1418  AGCCTCGAAAGCAACAGCATGTGATCTCAACAGAAGAAGGTGACATGATGGAGACAAACAGCACTGATGATGAG  1491
            |||||||||||||.|||||.||||||||.|||||.||.||.||.|||||||||||||||||||||||.||||||
Sbjct 2591  AGCCTCGAAAGCAGCAGCACGTGATCTCGACAGAGGAGGGGGATATGATGGAGACAAACAGCACTGACGATGAG  2664

Query 1492  AAGTCCACTGCCAAGAGTCTTCTGGTGAAGGCTGAGAAGCGCAAGTCTCCTCCCAAGGAGTATATTGATGAGGA  1565
            ||||||.|||||||||||||.|||||.|||||||||||||||||||||||||||||.|||||.|||||||||||
Sbjct 2665  AAGTCCGCTGCCAAGAGTCTCCTGGTAAAGGCTGAGAAGCGCAAGTCTCCTCCCAAAGAGTACATTGATGAGGA  2738

Query 1566  AGGTGTGAGATATGTCCCAGTGCGTCCAAGACCCCCCATTACTTTGCTTCGTCACTATCGGAACCCCTGGAAAG  1639
            |||||||||.||||||||||||||.||.|||||.||||||||||||||.|||||||||||||||||||||||||
Sbjct 2739  AGGTGTGAGGTATGTCCCAGTGCGACCCAGACCTCCCATTACTTTGCTACGTCACTATCGGAACCCCTGGAAAG  2812

Query 1640  CTGCTTACCACCACTTTCAGAGGTACAGTGACGTCCGGGTCAAAGAGGAGAAGAAAGCTATGCTGCAGGAAATA  1713
            |||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||
Sbjct 2813  CTGCTTATCACCACTTTCAGAGGTACAGTGACGTCCGGGTCAAAGAGGAGAAGAAAGCTATGCTACAGGAAATA  2886

Query 1714  GCTAATCAGAAAGGAGTATCCTGTCGTGCTCAAGGCTGGAAAGTCCACCTCTGTGCTGCCCAGTTACTACAGCT  1787
            |||||||||||||||||.|||||.|||||.||.|||||||||||.|||||||||||||||||||||||||||||
Sbjct 2887  GCTAATCAGAAAGGAGTGTCCTGCCGTGCCCAGGGCTGGAAAGTTCACCTCTGTGCTGCCCAGTTACTACAGCT  2960

Query 1788  GACGAATCTAGAACATGATGTCTATGAAAGACTTACTAACCTGCAGGAAGGGATTATCCCAAAGAAAAAAGCAG  1861
            |||.|||||||||||.||.||.|||||||||||.||.|||||.||||||||||||||||||||||||||.||||
Sbjct 2961  GACAAATCTAGAACACGACGTTTATGAAAGACTCACCAACCTACAGGAAGGGATTATCCCAAAGAAAAAGGCAG  3034

Query 1862  CAACAGATGATGATCTCCACCGAATAAACGAACTGATACAGGGAAATATGCAGAGGTGTAAACTTGTGATGGAT  1935
            |.||.|||||.|||||.||.||||||||.||.||||||||||||||.||||||.||||||||||.||||||||.
Sbjct 3035  CGACTGATGACGATCTACATCGAATAAATGAGCTGATACAGGGAAACATGCAGCGGTGTAAACTAGTGATGGAC  3108

Query 1936  CAAATCAGTGAAGCCAGAGACTCCATGCTTAAGGTTTTAGATCATAAAGACCGTGTCCTGAAGCTGCTTAACAA  2009
            |||||||||||.|||||||||||.||||||||||||.|.|||||.||.|||||.||.|||||||||||.|||||
Sbjct 3109  CAAATCAGTGAGGCCAGAGACTCTATGCTTAAGGTTCTGGATCACAAGGACCGGGTGCTGAAGCTGCTCAACAA  3182

Query 2010  GAACGGGACTGTCAAAAAAGTGTCCAAATTGAAGCGAAAGGAAAAAGTC  2058
            |||||||||.|||||.||.|||||.||.||||||||.|||||.||.||.
Sbjct 3183  GAACGGGACGGTCAAGAAGGTGTCAAAGTTGAAGCGGAAGGAGAAGGTG  3231

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