Nucleotide Global Alignment

Description

Query:
TRCN0000474581
Subject:
XM_006525954.3
Aligned Length:
3171
Identities:
1814
Gaps:
1113

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGAGTTCCCAGCAGTTTCCTCGGTTAGGAACCCCTTCCCCTGGGCTTAGCCAGCCACCTTCACAGATTGCAAG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CAGTGGTTCCGCAGGACTGATAAACCAAGTTGCCACAGTTAATGATGAGGCTGGCCGAGATGCTGATGTTGGTA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCAGGGAGCACGTGGGCCCTAGCAGCTCCCTGCCGCCCCGGGAAGAGAAGCAGGAGCCAGTTGTGGTAAGGCCC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TATCCACAGGTACAGATGCTGCCTGCACACCATGCTGTCGCCTCAGCCACCCCTGTCGCAGTGACAGCCCCGCC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AGCACACCTGACACCAGCAGTACCACTCTCTTTTTCGGAAGGACTTATGAAGCCGCCCCCGAAGCCTACCATGC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CTAGCCGTCCCATTGCGCCTGCTCCCCCTTCTACCATGTCACTTCCCCCGAAAGTTCCCGGGCAGGTTACTGTT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  ACCATGGAGAGCAGCATCCCTCAAGCTTCAGCCATTCCCGTGGCAACAATCAGTGGACAACAGGGGCATCCCAG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TAACCTGCATCACATTATGACCACAAATGTGCAGATGTCCATAATCCGCAGCAACGCTCCCGGGCCCCCACTTC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  ACATTGGAGCTTCCCACTTACCTCGAGGTGCAGCTGCTGCCGCTGTGATGTCCAGCTCTAAAGTAACTACAGTC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CTGAGGCCAACTTCACAGCTGCCAAATGCTGCTACGGCGCAGCCAGCAGTACAGCACCTCATTCACCAGCCAAT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CCAGTCTCGGCCACCTGTGACCACCTCCAGTACAATCCCTCCTGCTGTAGTAGCAACAGTCTCAGCCACCAGAG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CGCAGTCTCCTGTCATCACTACGACAGCGGCCCACGCGGCTGACTCGACGCTCAGTCGGCCCACTTTATCTATC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  CAGCATCCACCATCTGCAGCCATTAGTATCCAGCGTCCTGCACAGTCTCGAGATGTGACAACAAGAATCACACT  962

Query    1  ----------------------------------------------ATGGCTCAGAAAACAATCTTCAGTACTG  28
                                                          ||||||||||||||.|||||.|||||||
Sbjct  963  ACCTTCTCATCCTGCGTTAGGGACTCCGAAACAGCAGCTCCATACAATGGCTCAGAAAACCATCTTTAGTACTG  1036

Query   29  GCACGCCAGTGGCTGCAGCCACAGTAGCACCTATTTTGGCAACCAACACCATTCCTTCAGCGACCACAGCTGGA  102
            ||||.||||||||||||||.|||||||||||||||.|||||||||||||..||||||||.|.||||||||||||
Sbjct 1037  GCACACCAGTGGCTGCAGCTACAGTAGCACCTATTCTGGCAACCAACACGCTTCCTTCAACAACCACAGCTGGA  1110

Query  103  TCTGTGTCACACACGCAAGCTCCCACAAGTACCATTGTTACCATGACAGTACCCTCCCATTCCTCCCATGCTAC  176
            ||||||||.|||||.|||||||||||||||||.|||||||||||||||.|.|||||||||||.|||||||||||
Sbjct 1111  TCTGTGTCGCACACACAAGCTCCCACAAGTACAATTGTTACCATGACAATGCCCTCCCATTCATCCCATGCTAC  1184

Query  177  TGCTGTGACCACCTCAAACATCCCAGTCGCCAAGGTGGTGCCCCAGCAGATCACGCACACTTCTCCTCGGATCC  250
            ||||||||||||.|||||.||||||||.||.|||||||||||||||||||||||.||||||||.||||||||||
Sbjct 1185  TGCTGTGACCACTTCAAATATCCCAGTTGCTAAGGTGGTGCCCCAGCAGATCACACACACTTCCCCTCGGATCC  1258

Query  251  AGCCAGACTACCCTGCCGAGAGGAGTAGCCTGATTCCCATCTCCGGACATCGGGCCTCTCCCAATCCTGTGGCC  324
            ||||.||.||||||.|.|||||||||||||||||||||||.|||||.||||||||||||||.|||||.||||||
Sbjct 1259  AGCCTGATTACCCTCCAGAGAGGAGTAGCCTGATTCCCATTTCCGGCCATCGGGCCTCTCCAAATCCAGTGGCC  1332

Query  325  ATGGAAACCCGAAGTGACAACAGACCGTCTGTTCCCGTTCAGTTCCAATATTTTTTGCCAACTTACCCCCCTTC  398
            |||||||||||||.||||||||||||.||.|||||.|||||||||||.||.||.||||||||||||||.||.||
Sbjct 1333  ATGGAAACCCGAAATGACAACAGACCTTCCGTTCCTGTTCAGTTCCAGTACTTCTTGCCAACTTACCCACCCTC  1406

Query  399  TGCATACCCACTGGCGGCACATACCTACACCCCAATCACCAGTTCCGTGTCCACTATCCGACAGTATCCAGTTT  472
            |||.|||||.|||||.|||||.|||||||||||.||||||||.||.||||||||||||||.|||||.|||||||
Sbjct 1407  TGCCTACCCGCTGGCTGCACACACCTACACCCCCATCACCAGCTCTGTGTCCACTATCCGGCAGTACCCAGTTT  1480

Query  473  CAGCTCAGGCTCCAAACTCTGCCATCACAGCTCAGACTGGTGTTGGGGTAGCGTCTACCGTCCACCTAAACCCC  546
            |.|||||.||.||||||||..|||||||||||||.|||||||||||.|||||.|||||.||||||||.||||||
Sbjct 1481  CTGCTCAAGCCCCAAACTCCACCATCACAGCTCAAACTGGTGTTGGTGTAGCATCTACAGTCCACCTGAACCCC  1554

Query  547  ATGCAGTTGATGACAGTGGATGCATCGCATGCTCGACATATTCAAGGGATCCAGCCAGCACCCATCAGTACCCA  620
            ||||||.||||||||||||||||.||.|||||.||||||||.||.||||||||||||||||||||||||||.||
Sbjct 1555  ATGCAGCTGATGACAGTGGATGCCTCACATGCCCGACATATCCAGGGGATCCAGCCAGCACCCATCAGTACACA  1628

Query  621  GGGTATCCAGCCGGCCCCCATTGGGACCCCAGGGATACAGCCTGCACCACTTGGCACACAGGGAATTCACTCAG  694
            |||.||||||||.||||||||||||||..|||||||.|||||.||||||.|||||||.|..|||||.||.||||
Sbjct 1629  GGGAATCCAGCCAGCCCCCATTGGGACATCAGGGATCCAGCCAGCACCAATTGGCACCCCAGGAATCCATTCAG  1702

Query  695  CAACCCCAATCAACACACAAGGGCTTCAGCCTGCACCTATGGGTACTCAGCAGCCTCAGCCTGAAGGAAAGACT  768
            ||.|||||||||||||.||.|||||||||||.|||.|.||||.||.|||||||||.||||||||.||.||.||.
Sbjct 1703  CAGCCCCAATCAACACTCAGGGGCTTCAGCCAGCAGCAATGGCTAATCAGCAGCCACAGCCTGAGGGGAAAACC  1776

Query  769  TCAGCAGTGGTGTTGGCAGATGGAGCCACAATTGTGGCCAACCCTATTAGCAATCCATTCAGTGCTGCTCCAGC  842
            ||||||||||||||||||||||||||.||||||||.|||||||||||||||||.||||||||||||||||||||
Sbjct 1777  TCAGCAGTGGTGTTGGCAGATGGAGCTACAATTGTAGCCAACCCTATTAGCAACCCATTCAGTGCTGCTCCAGC  1850

Query  843  AGCAACAACCGTGGTGCAGACCCACAGCCAGAGTGCTAGCACCAACGCTCCCGCCCAGGGCTCATCGCCACGGC  916
            .|||||.||.|||||.|||||.|||||.||||||||||||||||||.|.||.|||||||||||.||.||.||||
Sbjct 1851  GGCAACCACAGTGGTCCAGACACACAGTCAGAGTGCTAGCACCAACACACCAGCCCAGGGCTCTTCTCCCCGGC  1924

Query  917  CAAGCATACTCCGGAAGAAACCTGCCACAGAT------------------------------------------  948
            |.||||||||.|||||||||||||||||||||                                          
Sbjct 1925  CCAGCATACTGCGGAAGAAACCTGCCACAGATGGGATGGCAGTCCGGAAAACTCTCCTCCCTCCTCAGCCTCCT  1998

Query  949  ---------------------------------------------------------------GGTGCCAAACC  959
                                                                           |||||||||||
Sbjct 1999  GACGTGGCTACTCCTCGAGTAGAAAGCTCTATGCGGAGTGCTTCTGGGTCACCTAGACCTGCAGGTGCCAAACC  2072

Query  960  CAAGTCTGAAATCCACGTGTCTATGGCCACTCCGGTCACTGTGTCCATGGAGACTGTATCCAATCAAAATAATG  1033
            .||.||.|||.|.||.||||||||.||||||||.||.||.||||||.|||||||..||||||||||||||...|
Sbjct 2073  TAAATCCGAAGTGCATGTGTCTATAGCCACTCCAGTTACAGTGTCCTTGGAGACCATATCCAATCAAAATGCCG  2146

Query 1034  ATCAGCCTACCATTGCCGTCCCTCCAACTGCCCAGCAGCCCCCACCGACCATTCCAACTATGATTGCAGCAGCC  1107
            |.|||||||||.||||.||||||||.||||||||||||||.||||||||||||||.|..||||||||.||||||
Sbjct 2147  AACAGCCTACCGTTGCTGTCCCTCCGACTGCCCAGCAGCCTCCACCGACCATTCCCAGCATGATTGCGGCAGCC  2220

Query 1108  AGTCCCCCGTCACAACCAGCCGTTGCCCTTTCAACCATTCCTGGAGCGGTCCCCATCACTCCACCCATCACCAC  1181
            |||||.||.||.|||||||||.||||||||||.||||||||.|||||.||.||..|||||||||||||||||||
Sbjct 2221  AGTCCTCCATCCCAACCAGCCATTGCCCTTTCCACCATTCCCGGAGCCGTGCCTGTCACTCCACCCATCACCAC  2294

Query 1182  CATTGCAGCTGCACCACCTCCATCAGTCACTGTGGGTGGCAGTCTTTCCTCCGTCTTGGGCCCTCCCGTTCCTG  1255
            ||||||.||..|||||.|.|..||||.|.|.|||||.||||.||.||||.|.|||.||||.|||||.|||||||
Sbjct 2295  CATTGCTGCCACACCAACGCTGTCAGCCCCAGTGGGCGGCACTCCTTCCACGGTCCTGGGGCCTCCTGTTCCTG  2368

Query 1256  AAATTAAAGTGAAAGAAGAAGTAGAACCAATGGATATCATGAGGCCAGTTTCTGCAGTTCCTCCACTGGCTACC  1329
            |.||.||||||||.|||||||..||.|||.||||.||||..|||||.||.||..||||.|||||.|||||.|||
Sbjct 2369  AGATCAAAGTGAAGGAAGAAGCGGAGCCAGTGGACATCACCAGGCCTGTCTCCACAGTCCCTCCTCTGGCCACC  2442

Query 1330  AACACTGTGTCTCCATCTCTTGCATTGCTGGCAAACAACTTGTCCATGCCTACAAGTGACCTACCACCTGGTGC  1403
            |||||.|||||||||||||||||.||||||||||.||||.|||||||||||.||||||||||.|||||||||||
Sbjct 2443  AACACGGTGTCTCCATCTCTTGCTTTGCTGGCAAGCAACCTGTCCATGCCTCCAAGTGACCTCCCACCTGGTGC  2516

Query 1404  CTCCCCAAGGAAAAAGCCTCGAAAGCAACAGCATGTGATCTCAACAGAAGAAGGTGACATGATGGAGACAAACA  1477
            |||||||||||||||||||||||||||.|||||.||||||||.|||||.||.||.||.||||||||||||||||
Sbjct 2517  CTCCCCAAGGAAAAAGCCTCGAAAGCAGCAGCACGTGATCTCGACAGAGGAGGGGGATATGATGGAGACAAACA  2590

Query 1478  GCACTGATGATGAGAAGTCCACTGCCAAGAGTCTTCTGGTGAAGGCTGAGAAGCGCAAGTCTCCTCCCAAGGAG  1551
            |||||||.||||||||||||.|||||||||||||.|||||.|||||||||||||||||||||||||||||.|||
Sbjct 2591  GCACTGACGATGAGAAGTCCGCTGCCAAGAGTCTCCTGGTAAAGGCTGAGAAGCGCAAGTCTCCTCCCAAAGAG  2664

Query 1552  TATATTGATGAGGAAGGTGTGAGATATGTCCCAGTGCGTCCAAGACCCCCCATTACTTTGCTTCGTCACTATCG  1625
            ||.||||||||||||||||||||.||||||||||||||.||.|||||.||||||||||||||.|||||||||||
Sbjct 2665  TACATTGATGAGGAAGGTGTGAGGTATGTCCCAGTGCGACCCAGACCTCCCATTACTTTGCTACGTCACTATCG  2738

Query 1626  GAACCCCTGGAAAGCTGCTTACCACCACTTTCAGAGGTACAGTGACGTCCGGGTCAAAGAGGAGAAGAAAGCTA  1699
            |||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739  GAACCCCTGGAAAGCTGCTTATCACCACTTTCAGAGGTACAGTGACGTCCGGGTCAAAGAGGAGAAGAAAGCTA  2812

Query 1700  TGCTGCAGGAAATAGCTAATCAGAAAGGAGTATCCTGTCGTGCTCAAGGCTGGAAAGTCCACCTCTGTGCTGCC  1773
            ||||.||||||||||||||||||||||||||.|||||.|||||.||.|||||||||||.|||||||||||||||
Sbjct 2813  TGCTACAGGAAATAGCTAATCAGAAAGGAGTGTCCTGCCGTGCCCAGGGCTGGAAAGTTCACCTCTGTGCTGCC  2886

Query 1774  CAGTTACTACAGCTGACGAATCTAGAACATGATGTCTATGAAAGACTTACTAACCTGCAGGAAGGGATTATCCC  1847
            |||||||||||||||||.|||||||||||.||.||.|||||||||||.||.|||||.|||||||||||||||||
Sbjct 2887  CAGTTACTACAGCTGACAAATCTAGAACACGACGTTTATGAAAGACTCACCAACCTACAGGAAGGGATTATCCC  2960

Query 1848  AAAGAAAAAAGCAGCAACAGATGATGATCTCCACCGAATAAACGAACTGATACAGGGAAATATGCAGAGGTGTA  1921
            |||||||||.|||||.||.|||||.|||||.||.||||||||.||.||||||||||||||.||||||.||||||
Sbjct 2961  AAAGAAAAAGGCAGCGACTGATGACGATCTACATCGAATAAATGAGCTGATACAGGGAAACATGCAGCGGTGTA  3034

Query 1922  AACTTGTGATGGATCAAATCAGTGAAGCCAGAGACTCCATGCTTAAGGTTTTAGATCATAAAGACCGTGTCCTG  1995
            ||||.||||||||.|||||||||||.|||||||||||.||||||||||||.|.|||||.||.|||||.||.|||
Sbjct 3035  AACTAGTGATGGACCAAATCAGTGAGGCCAGAGACTCTATGCTTAAGGTTCTGGATCACAAGGACCGGGTGCTG  3108

Query 1996  AAGCTGCTTAACAAGAACGGGACTGTCAAAAAAGTGTCCAAATTGAAGCGAAAGGAAAAAGTC  2058
            ||||||||.||||||||||||||.|||||.||.|||||.||.||||||||.|||||.||.||.
Sbjct 3109  AAGCTGCTCAACAAGAACGGGACGGTCAAGAAGGTGTCAAAGTTGAAGCGGAAGGAGAAGGTG  3171

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