Nucleotide Global Alignment

Description

Query:
TRCN0000474611
Subject:
NM_001122770.3
Aligned Length:
1527
Identities:
1059
Gaps:
462

Alignment

Query    1  ATGGAGAAAGGTGGGAACATACAATTGGAGATTCCTGACTTCAGCAACTCTGTCCTGAGCCATCTAAACCAGTT  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGAGAAAGGTGGGAACATACAATTGGAGATTCCTGACTTCAGCAACTCTGTCCTGAGCCATCTAAACCAGTT  74

Query   75  GCGCATGCAGGGCCGTCTCTGTGATATTGTGGTCAATGTGCAAGGACAAGCTTTTCGGGCTCACAAAGTGGTGC  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GCGCATGCAGGGCCGTCTCTGTGATATTGTGGTCAATGTGCAAGGACAAGCTTTTCGGGCTCACAAAGTGGTGC  148

Query  149  TGGCTGCCAGCTCCCCCTATTTCCGGGATCACATGTCCTTGAATGAGATGAGTACAGTCTCCATTTCAGTCATC  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TGGCTGCCAGCTCCCCCTATTTCCGGGATCACATGTCCTTGAATGAGATGAGTACAGTCTCCATTTCAGTCATC  222

Query  223  AAGAACCCTACTGTTTTTGAACAGCTCCTTTCTTTCTGTTACACAGGGCGGATATGCCTGCAACTGGCAGATAT  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  AAGAACCCTACTGTTTTTGAACAGCTCCTTTCTTTCTGTTACACAGGGCGGATATGCCTGCAACTGGCAGATAT  296

Query  297  CATCAGCTACCTAACAGCTGCCAGTTTTCTGCAAATGCAGCATATTATAGACAAATGTACACAGATCCTGGAGG  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CATCAGCTACCTAACAGCTGCCAGTTTTCTGCAAATGCAGCATATTATAGACAAATGTACACAGATCCTGGAGG  370

Query  371  GCATTCATTTCAAAATTAATGTGGCTGAGGTTGAAGCAGAATTAAGTCAAACAAGGACAAAGCATCAAGAGAGA  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  GCATTCATTTCAAAATTAATGTGGCTGAGGTTGAAGCAGAATTAAGTCAAACAAGGACAAAGCATCAAGAGAGA  444

Query  445  CCTCCAGAGTCTCACAGGGTTACACCAAATCTCAACCGCTCCCTTAGCCCACGACATAATACCCCAAAGGGAAA  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CCTCCAGAGTCTCACAGGGTTACACCAAATCTCAACCGCTCCCTTAGCCCACGACATAATACCCCAAAGGGAAA  518

Query  519  CCGGCGAGGTCAGGTTAGTGCTGTGCTGGATATCAGAGAGCTAAGTCCTCCTGAGGAGTCCACCAGCCCTCAGA  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CCGGCGAGGTCAGGTTAGTGCTGTGCTGGATATCAGAGAGCTAAGTCCTCCTGAGGAGTCCACCAGCCCTCAGA  592

Query  593  TCATTGAACCAAGTTCTGATGTAGAGAGCCGGGAGCCCATTCTTCGGATCAACCGAGCAGGACAGTGGTATGTG  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TCATTGAACCAAGTTCTGATGTAGAGAGCCGGGAGCCCATTCTTCGGATCAACCGAGCAGGACAGTGGTATGTG  666

Query  667  GAGACAGGAGTGGCGGACCGTGGGGGTCGGAGTGATGATGAAGTTAGAGTTCTTGGAGCAGTACACATCAAAAC  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GAGACAGGAGTGGCGGACCGTGGGGGTCGGAGTGATGATGAAGTTAGAGTTCTTGGAGCAGTACACATCAAAAC  740

Query  741  TGAAAATCTGGAGGAGTGGCTTGGGCCTGAGAATCAGCCTTCTGGAGAAGATGGGAGTAGTGCAGAGGAAGTAA  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  TGAAAATCTGGAGGAGTGGCTTGGGCCTGAGAATCAGCCTTCTGGAGAAGATGGGAGTAGTGCAGAGGAAGTAA  814

Query  815  CAGCCATGGTGATTGATACCACAGGCCATGGTTCTGTAGGACAGGAAAATTATACTTTAGGGTCTTCAGGAGCC  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  CAGCCATGGTGATTGATACCACAGGCCATGGTTCTGTAGGACAGGAAAATTATACTTTAGGGTCTTCAGGAGCC  888

Query  889  AAGGTGGCTCGGCCAACAAGCAGTGAAGTTGACAGATTTAGCCCCTCCGGCAGTGTTGTTCCCTTGACAGAGAG  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  AAGGTGGCTCGGCCAACAAGCAGTGAAGTTGACAGATTTAGCCCCTCCGGCAGTGTTGTTCCCTTGACAGAGAG  962

Query  963  ACACAGAGCCAGAAGTGAGTCTCCTGGGAGAATGGATGAGCCTAAGCAACCCAGCTCCCAGGTATG--GAGTTG  1034
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||||  
Sbjct  963  ACACAGAGCCAGAAGTGAGTCTCCTGGGAGAATGGATGAGCCTAAGCAACCCAGCTCCCAGGTA-GAAGAGT--  1033

Query 1035  TGGATTTAGAACTGCTTTGGTGGTTGGAGGAA-TTGCTACTGT---GTAT------------GAA---------  1083
                       |.||..||.||   ||||.|| |.|||| |||   ||||            |||         
Sbjct 1034  -----------CAGCAATGATG---GGAGTAAGTGGCTA-TGTGGAGTATCTCCGAGAGCAGGAAGTATCTGAG  1092

Query 1084  --------------------------------------------------------------------------  1083
                                                                                      
Sbjct 1093  CGGTGGTTCCGGTACAACCCTCGTCTCACCTGCATCTATTGCGCCAAATCTTTCAACCAGAAGGGAAGCCTGGA  1166

Query 1084  --------------------------------------------------------------------------  1083
                                                                                      
Sbjct 1167  CCGCCACATGCGCCTACACATGGGGATCACACCATTCGTCTGCCGCATGTGTGGCAAGAAGTATACCCGGAAAG  1240

Query 1084  --------------------------------------------------------------------------  1083
                                                                                      
Sbjct 1241  ATCAGCTGGAGTATCATATCCGCAAGCACACAGGCAACAAGCCCTTTCACTGTCATGTCTGTGGCAAAAGTTTC  1314

Query 1084  --------------------------------------------------------------------------  1083
                                                                                      
Sbjct 1315  CCCTTCCAGGCCATCTTGAATCAGCACTTTCGCAAAAACCACCCTGGCTGTATACCCCTGGAGGGGCCTCACAG  1388

Query 1084  --------------------------------------------------------------------------  1083
                                                                                      
Sbjct 1389  CATCTCCCCTGAAACAACTGTCACATCTCGAGGACAAGCTGAGGAAGAGTCACCTTCACAGGAAGAGACAGTTG  1462

Query 1084  -----------------------------------------------  1083
                                                           
Sbjct 1463  CTCCTGGGGAAGCTGTCCAGGGCTCTGTGTCCACCACTGGGCCAGAC  1509

GPP Web Portal Terms of Service

Effective Date: December 8, 2025
By using this site, you agree to our terms and conditions below.

Overview of Terms

The data made available on this website were generated for research purposes and are not intended for clinical or commercial uses. Commercial use (or other use for profit-making purposes) of the GPP Web Portal and its tools, is not permitted under these terms and may require a separate license agreement from Broad or its contributors. For more information, please contact partnering@broadinstitute.org.

The original data may be subject to rights claimed by third parties, including but not limited to, patent, copyright, other intellectual property rights, biodiversity-related access and benefit-sharing rights. It is the responsibility of users of Broad Institute services to ensure that their use of the data does not infringe any of the rights of such third parties.

Any questions or comments concerning these Terms of Use can be addressed to: legal@broadinstitute.org.

By accessing and viewing this GPP Web Portal, you agree to the following terms and conditions:

Attribution

You agree to acknowledge the Broad Institute (e.g., in publications, services or products) for any of your use of its online services, databases or software in accordance with good scientific practice. You agree to use the acknowledgment wording provided for the relevant tools as indicated on the FAQ for each tool.

Updating the Terms of Use

We reserve the right to update these Terms of Use at any time. When alterations are inevitable, we will attempt to give reasonable notice of any changes by placing a notice on our website, but you may wish to check each time you use the website. The date of the most recent revision will appear on this, the "GPP Web Portal Terms of Use" page. If you do not agree to these changes, please do not continue to use our online services. We will also make available an archived copy of the previous Terms of Use for comparison.

Indemnification and Disclaimer of Warranties

You are using this GPP Web Portal at your own risk, and you hereby agree to hold Broad and its contributors and their trustees, directors, officers, employees, and affiliated investigators harmless for any third party claims which may arise from your use of the GPP Web Portal, the tools available therein, or any portion thereof. Further, you agree to indemnify Broad, its contributors, and its and their trustees, directors, officers, employees, affiliated investigators, students, and affiliates for any loss, costs, claims, damages, or other liabilities arising from any unpermitted commercial or profit-making use you make of the GPP Web Portal. The GPP Web Portal is a research tool and is provided "as is". Broad does not represent that the GPP Web Portal is free of errors or bugs or suitable for any particular tasks.

ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, NONINFRINGEMENT, OR THE ABSENCE OF LATENT OR OTHER DEFECTS ARE DISCLAIMED. IN NO EVENT SHALL BROAD OR ITS CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THE GPP WEB PORTAL, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

Governing Law

The terms and conditions herein shall be construed, governed, interpreted, and applied in accordance with the internal laws of the Commonwealth of Massachusetts, U.S.A. Furthermore, by accessing, downloading, or using the Database, You consent to the personal jurisdiction of, and venue in, the state and federal courts within Massachusetts with respect to Your download or use of the Database.