Nucleotide Global Alignment
Description
- Query:
- TRCN0000474620
- Subject:
- XM_011537233.2
- Aligned Length:
- 1651
- Identities:
- 557
- Gaps:
- 1052
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGGTAAGAAGAGTCGAGTAAAAACTCAGAAATCTGGCACTGGTGCTACAGCAACTGTGTCACCAAAGGAAAT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTTGAACCTGACCAGTGAGCTGCTGCAGAAATGCAGCAGTCCGGCGCCTGGCCCAGGAAAAGAGTGGGAAGAGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATGTGCAGATCCGGACTCTGGTTGAGAAAATACGGAAAAAGCAAAAAGGTCTGTCCGTTACTTTTGATGGAAAA 222
Query 1 ------------------------ATGAAATGGGCCTCTGAAAATGGGGCTTCTGTCGAGGGTTTTGAAATGGT 50
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AGAGAAGATTACTTTCCTGATCTAATGAAATGGGCCTCTGAAAATGGGGCTTCTGTCGAGGGTTTTGAAATGGT 296
Query 51 TAACTTCAAAGAAGAGGGCTTTGGTTTGAGAGCAACAAGAGATATCAAGGCAGAAGAATTGTTTTTATGGGTTC 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TAACTTCAAAGAAGAGGGCTTTGGTTTGAGAGCAACAAGAGATATCAAGGCAGAAGAATTGTTTTTATGGGTTC 370
Query 125 CACGAAAATTGCTAATGACTGTTGAATCTGCTAAAAATTCAGTGTTGGGGCCCTTATATTCTCAAGACCGAATC 198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CACGAAAATTGCTAATGACTGTTGAATCTGCTAAAAATTCAGTGTTGGGGCCCTTATATTCTCAAGACCGAATC 444
Query 199 CTTCAAGCCATGGGAAACATCGCACTGGCCTTTCATTTGCTGTGTGAGCGAGCCAGCCCTAACTCCTTCTGGCA 272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CTTCAAGCCATGGGAAACATCGCACTGGCCTTTCATTTGCTGTGTGAGCGAGCCAGCCCTAACTCCTTCTGGCA 518
Query 273 GCCCTATATTCAAACCCTCCCCAGTGAATATGACACTCCTCTCTACTTTGAAGAAGATGAAGTTCGGTATCTTC 346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GCCCTATATTCAAACCCTCCCCAGTGAATATGACACTCCTCTCTACTTTGAAGAAGATGAAGTTCGGTATCTTC 592
Query 347 AGTCCACACAAGCTATACATGATGTCTTCAGCCAGTATAAAAACACAGCTCGACAGTACGCCTACTTCTATAAA 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AGTCCACACAAGCTATACATGATGTCTTCAGCCAGTATAAAAACACAGCTCGACAGTACGCCTACTTCTATAAA 666
Query 421 GTCATCCAGACCCATC-CTCATGCCAACAAACT--------ACC-CT---------------TGAAGGATTCTT 469
||||||||| ||| ||..||...||||.|| ||| || ||.||||| ||
Sbjct 667 GTCATCCAG----ATCACTACTGGTTACAACCTGGAAGATGACCGCTGTGAGTGTGTGGCTCTGCAGGAT--TT 734
Query 470 TCACTTACGAGGACTACAGGTGGGCAG--TCTCTTCTGTTATGACGAGGCA---AAACCAAATTCCCACAGAGG 538
|| ||.|| ||.|.|||| |..|.|.|.|||| |||| .|.|||| |.|||||.
Sbjct 735 TC--------GGGCT---GGAGAGCAGATTTACATTTTTTAT-----GGCACTCGATCCAA-----CGCAGAGT 787
Query 539 ATG-GTTCCCGCGTGACCCTGGCTCTGATTCCTTTATGGGATATGTGTAAC-CACACCA--------------- 595
.|| |.||| ||..|||.|.| |||.|| ||.| .|||| |||||.|
Sbjct 788 TTGTGATCC------ACAGTGGTTTT--TTCTTT-----GACA---ATAACTCACACGACAGAGTGAAAATAAA 845
Query 596 --------------------ACGGCCT-GACACCA-GAA----GATTCCTTCGCTCTTGCTG---TCGCCTCTG 640
||.|.|| .||.||| ||| ||...|||.||||.|||.| ||.||.||.
Sbjct 846 GCTTGGAGTGAGTAAAAGTGACAGACTCTACGCCATGAAGGCCGAGGTCTTGGCTCGTGCCGGCATCCCCACTT 919
Query 641 CC------------------------------------------------------------------------ 642
||
Sbjct 920 CCAGTGTTTTTGCATTGCATTTTACCGAGCCGCCCATCTCTGCTCAGCTTTTGGCTTTTCTCCGAGTATTCTGT 993
Query 643 -------------------------------------------------------------------------- 642
Sbjct 994 ATGACTGAAGAAGAACTGAAAGAACACTTGCTGGGAGACAGCGCTATTGATAGAATCTTCACCTTGGGGAACTC 1067
Query 643 -------------------------------------------------------------------------- 642
Sbjct 1068 GGAATTTCCTGTTAGCTGGGACAACGAGGTCAAACTTTGGACATTTCTTGAAGATAGAGCCTCACTTCTTTTAA 1141
Query 643 -------------------------------------------------------------------------- 642
Sbjct 1142 AAACATATAAAACAACTATTGAGGAAGATAAATCCGTCTTGAAAAACCACGATCTTTCTGTTCGTGCAAAAATG 1215
Query 643 -------------------------------------------------------------------------- 642
Sbjct 1216 GCCATCAAATTGCGCTTAGGTGAGAAAGAGATTTTGGAAAAAGCAGTAAAGAGTGCAGCTGTCAACCGGGAATA 1289
Query 643 -------------------------------------------------------------------------- 642
Sbjct 1290 CTATCGCCAACAGATGGAGGAAAAGGCTCCGCTTCCCAAATATGAAGAGAGTAACCTTGGGCTGTTGGAGAGCA 1363
Query 643 -------------------------------------------------------------------------- 642
Sbjct 1364 GCGTGGGGGACTCGAGGCTCCCCCTGGTCTTGAGAAACCTCGAGGAGGAGGCTGGAGTGCAGGATGCCTTGAAC 1437
Query 643 -------------------------------------------------------------------------- 642
Sbjct 1438 ATCAGAGAGGCAATCAGCAAAGCAAAGGCCACAGAAAACGGGCTTGTAAACGGTGAAAACTCTATCCCTAATGG 1511
Query 643 -------------------------------------------------------------------------- 642
Sbjct 1512 GACCAGGTCCGAAAATGAAAGTCTCAATCAAGAAAGTAAAAGAGCAGTTGAAGACGCCAAAGGATCTTCTTCAG 1585
Query 643 ----------------------- 642
Sbjct 1586 ACAGCACTGCTGGAGTTAAGGAG 1608
