Nucleotide Global Alignment
Description
- Query:
- TRCN0000474665
- Subject:
- XM_006509059.3
- Aligned Length:
- 2672
- Identities:
- 619
- Gaps:
- 1969
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAGATGGCGACGCGCCCCGCGCCGCCCGCTGGGTACCAGCCCCAGCGTCCCGCATCCCGGGTCCGCCGACCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTCGCCTCCGCTGCTGCTGCGGCTGCTGCCGCCGCCGCCGCCGCTGCTGCTGTTGCTGCTGCTGCTGCTGCTGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGACCGCGGCCCTGGCTCCGGGGGCGGCGGCCGAGCGGGCGGCTCCCGCGGGGGCCTCGGTGTGCTACTCGTCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCGCCCAGCGTGGGCTCGGTGCAGGAGCTGGCCCGGCGCGCCGCGGTGGTGATCGAGGGAAAGGTGCACCCGCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCGGCGGCAGCAGGGGGCACTCGACAGGAAGGCAGCAGGCGAGGCAGGGGCAGGGGCGCGGGACCAGCCCGCCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGGACCCGCCACCTTCACAGGACCCTCCGCCCTCTGACAACTGGACCCTACTCACCGGGTCCCCCGAACCCAGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACCGATCAGCCCAGGGACCCCGCGCCCTATCTGGTGAAGGTGCACCAGGTGTGGGCTGTGAAAGCCGGGGGCTT 518
Query 1 -------------------------------------------------------ATGTC---CGAGCG---CA 13
..||| ||.||| ||
Sbjct 519 GAAGAAGGACTCGCTACTCACCGTGCGCCTGGACACCTGGGGCCACTCAGCCTTCCCGTCCTGCGGGCGGCTCA 592
Query 14 AAGAAGGCAG-AGGCA---------AAGGGA-----AGGGCAAGAAGAAG-----------------------G 49
|.||.|.||| |||.| .|.||| |.|.||| .||.|| |
Sbjct 593 AGGAGGACAGCAGGTACATCTTCTTCATGGAGCCCGATGCCAA-CAGTAGCGGCCGCGCGCCGCCCGCCTTCCG 665
Query 50 AGC----------------GAGGCT--CCG-----GCAAGAAGCCGGA-GTCCGCGGCGG-------GCAGCCA 92
||| |||.|| ||| .|||||| ||| |||.|| ||| |||..|.
Sbjct 666 AGCCTCGTTTCCTCCGCTGGAGACTGGCCGCAACCTCAAGAA---GGAGGTCAGC--CGGGTGCTGTGCAAGCG 734
Query 93 GAGCCCAGCCTTGCCTCCCCAATTGAAAGAGATGAAAAGCCAGGAATCGGCTGCAGGTTCCAAACTAGTCCTTC 166
|.|| ||.|||||||||..||||||||||||||||||||||||.||.||||||||.|||||.||.||.||||
Sbjct 735 GTGC---GCATTGCCTCCCAGATTGAAAGAGATGAAAAGCCAGGAGTCAGCTGCAGGCTCCAAGCTCGTGCTTC 805
Query 167 GGTGTGAAACCAGTTCTGAATACTCCTCTCTCAGATTCAAGTGGTTCAAGAATGGGAATGAATTGAATCGAAAA 240
|||||||||||||.|||||.||||||||.|||||||||||.|||||||||||.||||||||..||||.||.|..
Sbjct 806 GGTGTGAAACCAGCTCTGAGTACTCCTCACTCAGATTCAAATGGTTCAAGAACGGGAATGAGCTGAACCGTAGG 879
Query 241 AACAAACCACAAAATATCAAGATACAAAAAAAGCCAGGGAAGTCAGAACTTCGCATTAACAAAGCATCACTGGC 314
||.|||||||||||..||||||||||.||.|||||||||||||||||.|||||.||.||||||||.||.|||||
Sbjct 880 AATAAACCACAAAACGTCAAGATACAGAAGAAGCCAGGGAAGTCAGAGCTTCGAATCAACAAAGCGTCCCTGGC 953
Query 315 TGATTCTGGAGAGTATATGTGCAAAGTGATCAGCAAATTAGGAAATGACAGTGCCTCTGCCAATATCACCATCG 388
|||.||||||||.|||||||||||||||||||||||.||||||||.|||||||||||||||||.||||||||.|
Sbjct 954 TGACTCTGGAGAATATATGTGCAAAGTGATCAGCAAGTTAGGAAACGACAGTGCCTCTGCCAACATCACCATTG 1027
Query 389 TGGAATCAAACGAGATCATCACTGGTATGCCAGCCTCAACTGAAGGAGCATATGTGTCTTCAGAGTCTCCCATT 462
|.||.||||||||..|||.||||||.|||.||||||||||||||.||.|.||||||||.|||||||||||||||
Sbjct 1028 TTGAGTCAAACGACCTCACCACTGGCATGTCAGCCTCAACTGAAAGACCCTATGTGTCCTCAGAGTCTCCCATT 1101
Query 463 AGAATATCAGTATCCACAGAAGGAGCAAATACTTCTTCATCTACATCTACATCCACCACTGGGACAAGCCATCT 536
|||||||||||.||.||||||||.|||||||||||||||||.||||||||||||||.||||||||.||||||||
Sbjct 1102 AGAATATCAGTTTCAACAGAAGGCGCAAATACTTCTTCATCCACATCTACATCCACGACTGGGACCAGCCATCT 1175
Query 537 TGTAAAATGTGCGGAGAAGGAGAAAACTTTCTGTGTGAATGGAGGGGAGTGCTTCATGGTGAAAGACCTTTCAA 610
..||||.||||||||||||||||||||||||||||||||||||||.|||||||||||||||||.|||||.||||
Sbjct 1176 CATAAAGTGTGCGGAGAAGGAGAAAACTTTCTGTGTGAATGGAGGCGAGTGCTTCATGGTGAAGGACCTGTCAA 1249
Query 611 ACCCCTCGAGATACTTGTGCAAGTGCCCAAATGAGTTTACTGGTGATCGCTGCCAAAACTACGTAATGGCCAGC 684
|||||||.|||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||
Sbjct 1250 ACCCCTCAAGATACTTGTGCAAGTGCCCAAATGAGTTTACTGGTGATCGTTGCCAAAACTACGTAATGGCCAGC 1323
Query 685 TTCTACAGTACGTCCACTCCCTTTCT--------------------------GTCTCT---------------- 716
|||||||..|| |||| |.||||
Sbjct 1324 TTCTACATGAC-----------TTCTAGGAGGAAAAGGCAAGAAACAGAGAAGCCTCTAGAAAGAAAATTGGAT 1386
Query 717 ----GCC---TGAA------------------------------------------------------------ 723
||| ||||
Sbjct 1387 CATAGCCTTGTGAAAGAAACGAAGCATCTTGGGATTGAATTTATGGAAGCGGAGGAGCTCTACCAGAAGAGGGT 1460
Query 724 -------------------------------------------------------------------------- 723
Sbjct 1461 ACTGACAATTACTGGCATCTGTATCGCCCTGTTGGTGGTCGGCATCATGTGTGTGGTGGCCTACTGCAAAACCA 1534
Query 724 -------------------------------------------------------------------------- 723
Sbjct 1535 AGAAACAGCGGCAGAAGCTTCATGATCGGCTCCGGCAGAGCCTTCGGTCAGAACGAAACAACATGGTGAACATA 1608
Query 724 -------------------------------------------------------------------------- 723
Sbjct 1609 GCGAATGGCCCTCACCATCCAAACCCACCACCAGAGAATGTGCAACTGGTGAATCAATATGTATCTAAAAACGT 1682
Query 724 -------------------------------------------------------------------------- 723
Sbjct 1683 CATCTCCAGTGAGCATATTGTGGAGAGAGAAGTGGAGACCTCCTTTTCCACCAGTCACTACACTTCCACAGCTC 1756
Query 724 -------------------------------------------------------------------------- 723
Sbjct 1757 ATCACTCCACGACTGTCACCCAGACTCCTAGTCACAGCTGGAGTAATGGGCACACAGAAAGCATCATTTCAGAA 1830
Query 724 -------------------------------------------------------------------------- 723
Sbjct 1831 AGCCACTCTGTAATCATGATGTCATCGGTAGAGAACAGCAGGCACAGCAGCCCAGCTGGGGGCCCACGAGGACG 1904
Query 724 -------------------------------------------------------------------------- 723
Sbjct 1905 TCTTCATGGCCTGGGAGGCCCTCGCGAATGTAACAGCTTCCTCAGGCATGCCAGAGAAACCCCTGACTCCTACA 1978
Query 724 -------------------------------------------------------------------------- 723
Sbjct 1979 GAGACTCTCCTCATAGTGAAAGGTATGTATCAGCCATGACCACCCCGGCTCGTATGTCACCTGTAGATTTCCAC 2052
Query 724 -------------------------------------------------------------------------- 723
Sbjct 2053 ACGCCAAGCTCCCCTAAATCGCCCCCTTCGGAAATGTCTCCACCCGTGTCCAGCATGACGGTGTCCATGCCCTC 2126
Query 724 -------------------------------------------------------------------------- 723
Sbjct 2127 TGTGGCAGTCAGCCCCTTTGTGGAAGAAGAGAGGCCTCTGCTTCTTGTGACGCCACCGAGGCTACGGGAGAAGA 2200
Query 724 -------------------------------------------------------------------------- 723
Sbjct 2201 AGTATGATCATCACCCCCAGCAACTCAACTCCTTTCATCACAACCCTGCACATCAGAGTACCAGCCTCCCCCCT 2274
Query 724 -------------------------------------------------------------------------- 723
Sbjct 2275 AGCCCATTGAGGATAGTGGAGGATGAGGAATACGAAACGACCCAGGAGTATGAGCCAATTCAAGAGCCTATTAA 2348
Query 724 -------------------------------------------------------------------------- 723
Sbjct 2349 GAAAGTCACCAATAGCCGGCGGGCCAAAAGAACCAAGCCCAATGGCCACATTGCCAATAGGTTGGAAATGGACA 2422
Query 724 -------------------------------------------------------------------------- 723
Sbjct 2423 GCAACCCAAGTTCTGTGAGCAGTAACTCAGAAAGTGAGACAGAAGATGAAAGAGTAGGTGAAGATACACCATTC 2496
Query 724 -------------------------------------------------------------------------- 723
Sbjct 2497 CTGGGCATACAGAACCCCCTGGCAGCCAGCCTTGAGGTGGCCCCTGCCTTCCGTCTGGCTGAGAGCAGGACTAA 2570
Query 724 -------------------------------------------------------------------------- 723
Sbjct 2571 CCCAGCAGGCCGCTTCTCCACACAGGAAGAATTACAGGCCAGGCTGTCTAGTGTAATCGCTAACCAAGACCCTA 2644
Query 724 -------- 723
Sbjct 2645 TTGCTGTA 2652
