Nucleotide Global Alignment
Description
- Query:
- TRCN0000474665
- Subject:
- XM_011544512.2
- Aligned Length:
- 1996
- Identities:
- 662
- Gaps:
- 1313
Alignment
Query 1 AT---GTCCGAGCGCAAAGA-----AG---------------------------------------GCAGA--G 25
|| |.|||| |||.||.| || |.||| |
Sbjct 1 ATGGAGCCCGA-CGCCAACAGCACCAGCCGCGCGCCGGCCGCCTTCCGAGCCTCTTTCCCCCCTCTGGAGACGG 73
Query 26 GCAAAGGGAAGGGCAAGAAGAAGGAGCGAGGCTCCGGCAAGAAGCCGGAGTCCGCGGC-GGGCAGCCAGAGCCC 98
|| .||||...|||||||.||| || |||||| || || |.|||..|.|.||
Sbjct 74 GC---CGGAACCTCAAGAAGGAGG--------TC--------AGCCGG-GT-----GCTGTGCAAGCGGTGC-- 120
Query 99 AGCCTTGCCTCCCCAATTGAAAGAGATGAAAAGCCAGGAATCGGCTGCAGGTTCCAAACTAGTCCTTCGGTGTG 172
|||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 -GCCTTGCCTCCCCGATTGAAAGAGATGAAAAGCCAGGAATCGGCTGCAGGTTCCAAACTAGTCCTTCGGTGTG 193
Query 173 AAACCAGTTCTGAATACTCCTCTCTCAGATTCAAGTGGTTCAAGAATGGGAATGAATTGAATCGAAAAAACAAA 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 194 AAACCAGTTCTGAATACTCCTCTCTCAGATTCAAGTGGTTCAAGAATGGGAATGAATTGAATCGAAAAAACAAA 267
Query 247 CCACAAAATATCAAGATACAAAAAAAGCCAGGGAAGTCAGAACTTCGCATTAACAAAGCATCACTGGCTGATTC 320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 268 CCACAAAATATCAAGATACAAAAAAAGCCAGGGAAGTCAGAACTTCGCATTAACAAAGCATCACTGGCTGATTC 341
Query 321 TGGAGAGTATATGTGCAAAGTGATCAGCAAATTAGGAAATGACAGTGCCTCTGCCAATATCACCATCGTGGAAT 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 342 TGGAGAGTATATGTGCAAAGTGATCAGCAAATTAGGAAATGACAGTGCCTCTGCCAATATCACCATCGTGGAAT 415
Query 395 CAAACGAGATCATCACTGGTATGCCAGCCTCAACTGAAGGAGCATATGTGTCTTCAGAGTCTCCCATTAGAATA 468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 416 CAAACGAGATCATCACTGGTATGCCAGCCTCAACTGAAGGAGCATATGTGTCTTCAGAGTCTCCCATTAGAATA 489
Query 469 TCAGTATCCACAGAAGGAGCAAATACTTCTTCATCTACATCTACATCCACCACTGGGACAAGCCATCTTGTAAA 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 490 TCAGTATCCACAGAAGGAGCAAATACTTCTTCATCTACATCTACATCCACCACTGGGACAAGCCATCTTGTAAA 563
Query 543 ATGTGCGGAGAAGGAGAAAACTTTCTGTGTGAATGGAGGGGAGTGCTTCATGGTGAAAGACCTTTCAAACCCCT 616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 564 ATGTGCGGAGAAGGAGAAAACTTTCTGTGTGAATGGAGGGGAGTGCTTCATGGTGAAAGACCTTTCAAACCCCT 637
Query 617 CGAGATACTTGTGCAAGTGCCCAAATGAGTTTACTGGTGATCGCTGCCAAAACTACGTAATGGCCAGCTTCTAC 690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 638 CGAGATACTTGTGCAAGTGCCCAAATGAGTTTACTGGTGATCGCTGCCAAAACTACGTAATGGCCAGCTTCTAC 711
Query 691 A--------------GTACGTCCACTCCCTTTCTG-----------TCTCTGCCTGAA---------------- 723
| |.| |||.|| .||.|.||.|||
Sbjct 712 AAGCATCTTGGGATTGAA-----------TTTATGGAGGCGGAGGAGCTGTACCAGAAGAGAGTGCTGACCATA 774
Query 724 -------------------------------------------------------------------------- 723
Sbjct 775 ACCGGCATCTGCATCGCCCTCCTTGTGGTCGGCATCATGTGTGTGGTGGCCTACTGCAAAACCAAGAAACAGCG 848
Query 724 -------------------------------------------------------------------------- 723
Sbjct 849 GAAAAAGCTGCATGACCGTCTTCGGCAGAGCCTTCGGTCTGAACGAAACAATATGATGAACATTGCCAATGGGC 922
Query 724 -------------------------------------------------------------------------- 723
Sbjct 923 CTCACCATCCTAACCCACCCCCCGAGAATGTCCAGCTGGTGAATCAATACGTATCTAAAAACGTCATCTCCAGT 996
Query 724 -------------------------------------------------------------------------- 723
Sbjct 997 GAGCATATTGTTGAGAGAGAAGCAGAGACATCCTTTTCCACCAGTCACTATACTTCCACAGCCCATCACTCCAC 1070
Query 724 -------------------------------------------------------------------------- 723
Sbjct 1071 TACTGTCACCCAGACTCCTAGCCACAGCTGGAGCAACGGACACACTGAAAGCATCCTTTCCGAAAGCCACTCTG 1144
Query 724 -------------------------------------------------------------------------- 723
Sbjct 1145 TAATCGTGATGTCATCCGTAGAAAACAGTAGGCACAGCAGCCCAACTGGGGGCCCAAGAGGACGTCTTAATGGC 1218
Query 724 -------------------------------------------------------------------------- 723
Sbjct 1219 ACAGGAGGCCCTCGTGAATGTAACAGCTTCCTCAGGCATGCCAGAGAAACCCCTGATTCCTACCGAGACTCTCC 1292
Query 724 -------------------------------------------------------------------------- 723
Sbjct 1293 TCATAGTGAAAGGTATGTGTCAGCCATGACCACCCCGGCTCGTATGTCACCTGTAGATTTCCACACGCCAAGCT 1366
Query 724 -------------------------------------------------------------------------- 723
Sbjct 1367 CCCCCAAATCGCCCCCTTCGGAAATGTCTCCACCCGTGTCCAGCATGACGGTGTCCATGCCTTCCATGGCGGTC 1440
Query 724 -------------------------------------------------------------------------- 723
Sbjct 1441 AGCCCCTTCATGGAAGAAGAGAGACCTCTACTTCTCGTGACACCACCAAGGCTGCGGGAGAAGAAGTTTGACCA 1514
Query 724 -------------------------------------------------------------------------- 723
Sbjct 1515 TCACCCTCAGCAGTTCAGCTCCTTCCACCACAACCCCGCGCATGACAGTAACAGCCTCCCTGCTAGCCCCTTGA 1588
Query 724 -------------------------------------------------------------------------- 723
Sbjct 1589 GGATAGTGGAGGATGAGGAGTATGAAACGACCCAAGAGTACGAGCCAGCCCAAGAGCCTGTTAAGAAACTCGCC 1662
Query 724 -------------------------------------------------------------------------- 723
Sbjct 1663 AATAGCCGGCGGGCCAAAAGAACCAAGCCCAATGGCCACATTGCTAACAGATTGGAAGTGGACAGCAACACAAG 1736
Query 724 -------------------------------------------------------------------------- 723
Sbjct 1737 CTCCCAGAGCAGTAACTCAGAGAGTGAAACAGAAGATGAAAGAGTAGGTGAAGATACGCCTTTCCTGGGCATAC 1810
Query 724 -------------------------------------------------------------------------- 723
Sbjct 1811 AGAACCCCCTGGCAGCCAGTCTTGAGGCAACACCTGCCTTCCGCCTGGCTGACAGCAGGACTAACCCAGCAGGC 1884
Query 724 ------------------------------------------------------------------------ 723
Sbjct 1885 CGCTTCTCGACACAGGAAGAAATCCAGGCCAGGCTGTCTAGTGTAATTGCTAACCAAGACCCTATTGCTGTA 1956
