Nucleotide Global Alignment
Description
- Query:
- TRCN0000474665
- Subject:
- XM_017013365.2
- Aligned Length:
- 1973
- Identities:
- 659
- Gaps:
- 1282
Alignment
Query 1 AT---GTCCGAGCGCAAAGA-----AG---------------------------------------GCAGA--G 25
|| |.|||| |||.||.| || |.||| |
Sbjct 1 ATGGAGCCCGA-CGCCAACAGCACCAGCCGCGCGCCGGCCGCCTTCCGAGCCTCTTTCCCCCCTCTGGAGACGG 73
Query 26 GCAAAGGGAAGGGCAAGAAGAAGGAGCGAGGCTCCGGCAAGAAGCCGGAGTCCGCGGC-GGGCAGCCAGAGCCC 98
|| .||||...|||||||.||| || |||||| || || |.|||..|.|.||
Sbjct 74 GC---CGGAACCTCAAGAAGGAGG--------TC--------AGCCGG-GT-----GCTGTGCAAGCGGTGC-- 120
Query 99 AGCCTTGCCTCCCCAATTGAAAGAGATGAAAAGCCAGGAATCGGCTGCAGGTTCCAAACTAGTCCTTCGGTGTG 172
|||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 -GCCTTGCCTCCCCGATTGAAAGAGATGAAAAGCCAGGAATCGGCTGCAGGTTCCAAACTAGTCCTTCGGTGTG 193
Query 173 AAACCAGTTCTGAATACTCCTCTCTCAGATTCAAGTGGTTCAAGAATGGGAATGAATTGAATCGAAAAAACAAA 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 194 AAACCAGTTCTGAATACTCCTCTCTCAGATTCAAGTGGTTCAAGAATGGGAATGAATTGAATCGAAAAAACAAA 267
Query 247 CCACAAAATATCAAGATACAAAAAAAGCCAGGGAAGTCAGAACTTCGCATTAACAAAGCATCACTGGCTGATTC 320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 268 CCACAAAATATCAAGATACAAAAAAAGCCAGGGAAGTCAGAACTTCGCATTAACAAAGCATCACTGGCTGATTC 341
Query 321 TGGAGAGTATATGTGCAAAGTGATCAGCAAATTAGGAAATGACAGTGCCTCTGCCAATATCACCATCGTGGAAT 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 342 TGGAGAGTATATGTGCAAAGTGATCAGCAAATTAGGAAATGACAGTGCCTCTGCCAATATCACCATCGTGGAAT 415
Query 395 CAAACGAGATCATCACTGGTATGCCAGCCTCAACTGAAGGAGCATATGTGTCTTCAGAGTCTCCCATTAGAATA 468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 416 CAAACGAGATCATCACTGGTATGCCAGCCTCAACTGAAGGAGCATATGTGTCTTCAGAGTCTCCCATTAGAATA 489
Query 469 TCAGTATCCACAGAAGGAGCAAATACTTCTTCATCTACATCTACATCCACCACTGGGACAAGCCATCTTGTAAA 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 490 TCAGTATCCACAGAAGGAGCAAATACTTCTTCATCTACATCTACATCCACCACTGGGACAAGCCATCTTGTAAA 563
Query 543 ATGTGCGGAGAAGGAGAAAACTTTCTGTGTGAATGGAGGGGAGTGCTTCATGGTGAAAGACCTTTCAAACCCCT 616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 564 ATGTGCGGAGAAGGAGAAAACTTTCTGTGTGAATGGAGGGGAGTGCTTCATGGTGAAAGACCTTTCAAACCCCT 637
Query 617 CGAGATACTTGTGCAAGTGCCCAAATGAGTTTACTGG----TGATCG--CTG-------------------CCA 665
|||||||||||||||||||||.|..||..||.||||| .||| | ||| |||
Sbjct 638 CGAGATACTTGTGCAAGTGCCAACCTGGATTCACTGGAGCAAGAT-GTACTGAGAATGTGCCCATGAAAGTCCA 710
Query 666 AAACTACGTAATGGC----CAGCTTCTAC--------AGTAC-GTCCA--------------------CTCCCT 706
||||.|.|.||.||| .||| |.||| |||.| |.||| || |||
Sbjct 711 AAACCAAGAAAAGGCGGAGGAGC-TGTACCAGAAGAGAGTGCTGACCATAACCGGCATCTGCATCGCCCT-CCT 782
Query 707 T----TC-------TGTCTCT----GCCT-------------GAA----------------------------- 723
| || |||.|.| |||| |||
Sbjct 783 TGTGGTCGGCATCATGTGTGTGGTGGCCTACTGCAAAACCAAGAAACAGCGGAAAAAGCTGCATGACCGTCTTC 856
Query 724 -------------------------------------------------------------------------- 723
Sbjct 857 GGCAGAGCCTTCGGTCTGAACGAAACAATATGATGAACATTGCCAATGGGCCTCACCATCCTAACCCACCCCCC 930
Query 724 -------------------------------------------------------------------------- 723
Sbjct 931 GAGAATGTCCAGCTGGTGAATCAATACGTATCTAAAAACGTCATCTCCAGTGAGCATATTGTTGAGAGAGAAGC 1004
Query 724 -------------------------------------------------------------------------- 723
Sbjct 1005 AGAGACATCCTTTTCCACCAGTCACTATACTTCCACAGCCCATCACTCCACTACTGTCACCCAGACTCCTAGCC 1078
Query 724 -------------------------------------------------------------------------- 723
Sbjct 1079 ACAGCTGGAGCAACGGACACACTGAAAGCATCCTTTCCGAAAGCCACTCTGTAATCGTGATGTCATCCGTAGAA 1152
Query 724 -------------------------------------------------------------------------- 723
Sbjct 1153 AACAGTAGGCACAGCAGCCCAACTGGGGGCCCAAGAGGACGTCTTAATGGCACAGGAGGCCCTCGTGAATGTAA 1226
Query 724 -------------------------------------------------------------------------- 723
Sbjct 1227 CAGCTTCCTCAGGCATGCCAGAGAAACCCCTGATTCCTACCGAGACTCTCCTCATAGTGAAAGGTATGTGTCAG 1300
Query 724 -------------------------------------------------------------------------- 723
Sbjct 1301 CCATGACCACCCCGGCTCGTATGTCACCTGTAGATTTCCACACGCCAAGCTCCCCCAAATCGCCCCCTTCGGAA 1374
Query 724 -------------------------------------------------------------------------- 723
Sbjct 1375 ATGTCTCCACCCGTGTCCAGCATGACGGTGTCCATGCCTTCCATGGCGGTCAGCCCCTTCATGGAAGAAGAGAG 1448
Query 724 -------------------------------------------------------------------------- 723
Sbjct 1449 ACCTCTACTTCTCGTGACACCACCAAGGCTGCGGGAGAAGAAGTTTGACCATCACCCTCAGCAGTTCAGCTCCT 1522
Query 724 -------------------------------------------------------------------------- 723
Sbjct 1523 TCCACCACAACCCCGCGCATGACAGTAACAGCCTCCCTGCTAGCCCCTTGAGGATAGTGGAGGATGAGGAGTAT 1596
Query 724 -------------------------------------------------------------------------- 723
Sbjct 1597 GAAACGACCCAAGAGTACGAGCCAGCCCAAGAGCCTGTTAAGAAACTCGCCAATAGCCGGCGGGCCAAAAGAAC 1670
Query 724 -------------------------------------------------------------------------- 723
Sbjct 1671 CAAGCCCAATGGCCACATTGCTAACAGATTGGAAGTGGACAGCAACACAAGCTCCCAGAGCAGTAACTCAGAGA 1744
Query 724 -------------------------------------------------------------------------- 723
Sbjct 1745 GTGAAACAGAAGATGAAAGAGTAGGTGAAGATACGCCTTTCCTGGGCATACAGAACCCCCTGGCAGCCAGTCTT 1818
Query 724 -------------------------------------------------------------------------- 723
Sbjct 1819 GAGGCAACACCTGCCTTCCGCCTGGCTGACAGCAGGACTAACCCAGCAGGCCGCTTCTCGACACAGGAAGAAAT 1892
Query 724 ------------------------------------------------- 723
Sbjct 1893 CCAGGCCAGGCTGTCTAGTGTAATTGCTAACCAAGACCCTATTGCTGTA 1941
