Nucleotide Global Alignment
Description
- Query:
- TRCN0000474665
- Subject:
- XM_017013367.1
- Aligned Length:
- 1996
- Identities:
- 560
- Gaps:
- 1415
Alignment
Query 1 AT---GTCCGAGCGCAAAGA-----AG---------------------------------------GCAGA--G 25
|| |.|||| |||.||.| || |.||| |
Sbjct 1 ATGGAGCCCGA-CGCCAACAGCACCAGCCGCGCGCCGGCCGCCTTCCGAGCCTCTTTCCCCCCTCTGGAGACGG 73
Query 26 GCAAAGGGAAGGGCAAGAAGAAGGAGCGAGGCTCCGGCAAGAAGCCGGAGTCCGCGGC-GGGCAGCCAGAGCCC 98
|| .||||...|||||||.||| || |||||| || || |.|||..|.|.||
Sbjct 74 GC---CGGAACCTCAAGAAGGAGG--------TC--------AGCCGG-GT-----GCTGTGCAAGCGGTGC-- 120
Query 99 AGCCTTGCCTCCCCAATTGAAAGAGATGAAAAGCCAGGAATCGGCTGCAGGTTCCAAACTAGTCCTTCGGTGTG 172
|||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 -GCCTTGCCTCCCCGATTGAAAGAGATGAAAAGCCAGGAATCGGCTGCAGGTTCCAAACTAGTCCTTCGGTGTG 193
Query 173 AAACCAGTTCTGAATACTCCTCTCTCAGATTCAAGTGGTTCAAGAATGGGAATGAATTGAATCGAAAAAACAAA 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 194 AAACCAGTTCTGAATACTCCTCTCTCAGATTCAAGTGGTTCAAGAATGGGAATGAATTGAATCGAAAAAACAAA 267
Query 247 CCACAAAATATCAAGATACAAAAAAAGCCAGGGAAGTCAGAACTTCGCATTAACAAAGCATCACTGGCTGATTC 320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 268 CCACAAAATATCAAGATACAAAAAAAGCCAGGGAAGTCAGAACTTCGCATTAACAAAGCATCACTGGCTGATTC 341
Query 321 TGGAGAGTATATGTGCAAAGTGATCAGCAAATTAGGAAATGACAGTGCCTCTGCCAATATCACCATCGTGGAAT 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 342 TGGAGAGTATATGTGCAAAGTGATCAGCAAATTAGGAAATGACAGTGCCTCTGCCAATATCACCATCGTGGAAT 415
Query 395 CAAACGAGATCATCACTGGTATGCCAGCCTCAACTGAAGGAGCATATGTGTCTTCAGAGTCTCCCATTAGAATA 468
||||||
Sbjct 416 CAAACG-------------------------------------------------------------------- 421
Query 469 TCAGTATCCACAGAAGGAGCAAATACTTCTTCATCTACATCTACATCCACCACTGGGACAAGCCATCTTGTAAA 542
||||||||||||||||||||||||||||||||||||||||
Sbjct 422 ----------------------------------CTACATCTACATCCACCACTGGGACAAGCCATCTTGTAAA 461
Query 543 ATGTGCGGAGAAGGAGAAAACTTTCTGTGTGAATGGAGGGGAGTGCTTCATGGTGAAAGACCTTTCAAACCCCT 616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 462 ATGTGCGGAGAAGGAGAAAACTTTCTGTGTGAATGGAGGGGAGTGCTTCATGGTGAAAGACCTTTCAAACCCCT 535
Query 617 CGAGATACTTGTGCAAGTGCCCAAATGAGTTTACTGGTGATCGCTGCCAAAACTACGTAATGGCCAGCTTCTAC 690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 536 CGAGATACTTGTGCAAGTGCCCAAATGAGTTTACTGGTGATCGCTGCCAAAACTACGTAATGGCCAGCTTCTAC 609
Query 691 A--------------GTACGTCCACTCCCTTTCTG-----------TCTCTGCCTGAA---------------- 723
| |.| |||.|| .||.|.||.|||
Sbjct 610 AAGCATCTTGGGATTGAA-----------TTTATGGAGGCGGAGGAGCTGTACCAGAAGAGAGTGCTGACCATA 672
Query 724 -------------------------------------------------------------------------- 723
Sbjct 673 ACCGGCATCTGCATCGCCCTCCTTGTGGTCGGCATCATGTGTGTGGTGGCCTACTGCAAAACCAAGAAACAGCG 746
Query 724 -------------------------------------------------------------------------- 723
Sbjct 747 GAAAAAGCTGCATGACCGTCTTCGGCAGAGCCTTCGGTCTGAACGAAACAATATGATGAACATTGCCAATGGGC 820
Query 724 -------------------------------------------------------------------------- 723
Sbjct 821 CTCACCATCCTAACCCACCCCCCGAGAATGTCCAGCTGGTGAATCAATACGTATCTAAAAACGTCATCTCCAGT 894
Query 724 -------------------------------------------------------------------------- 723
Sbjct 895 GAGCATATTGTTGAGAGAGAAGCAGAGACATCCTTTTCCACCAGTCACTATACTTCCACAGCCCATCACTCCAC 968
Query 724 -------------------------------------------------------------------------- 723
Sbjct 969 TACTGTCACCCAGACTCCTAGCCACAGCTGGAGCAACGGACACACTGAAAGCATCCTTTCCGAAAGCCACTCTG 1042
Query 724 -------------------------------------------------------------------------- 723
Sbjct 1043 TAATCGTGATGTCATCCGTAGAAAACAGTAGGCACAGCAGCCCAACTGGGGGCCCAAGAGGACGTCTTAATGGC 1116
Query 724 -------------------------------------------------------------------------- 723
Sbjct 1117 ACAGGAGGCCCTCGTGAATGTAACAGCTTCCTCAGGCATGCCAGAGAAACCCCTGATTCCTACCGAGACTCTCC 1190
Query 724 -------------------------------------------------------------------------- 723
Sbjct 1191 TCATAGTGAAAGGTATGTGTCAGCCATGACCACCCCGGCTCGTATGTCACCTGTAGATTTCCACACGCCAAGCT 1264
Query 724 -------------------------------------------------------------------------- 723
Sbjct 1265 CCCCCAAATCGCCCCCTTCGGAAATGTCTCCACCCGTGTCCAGCATGACGGTGTCCATGCCTTCCATGGCGGTC 1338
Query 724 -------------------------------------------------------------------------- 723
Sbjct 1339 AGCCCCTTCATGGAAGAAGAGAGACCTCTACTTCTCGTGACACCACCAAGGCTGCGGGAGAAGAAGTTTGACCA 1412
Query 724 -------------------------------------------------------------------------- 723
Sbjct 1413 TCACCCTCAGCAGTTCAGCTCCTTCCACCACAACCCCGCGCATGACAGTAACAGCCTCCCTGCTAGCCCCTTGA 1486
Query 724 -------------------------------------------------------------------------- 723
Sbjct 1487 GGATAGTGGAGGATGAGGAGTATGAAACGACCCAAGAGTACGAGCCAGCCCAAGAGCCTGTTAAGAAACTCGCC 1560
Query 724 -------------------------------------------------------------------------- 723
Sbjct 1561 AATAGCCGGCGGGCCAAAAGAACCAAGCCCAATGGCCACATTGCTAACAGATTGGAAGTGGACAGCAACACAAG 1634
Query 724 -------------------------------------------------------------------------- 723
Sbjct 1635 CTCCCAGAGCAGTAACTCAGAGAGTGAAACAGAAGATGAAAGAGTAGGTGAAGATACGCCTTTCCTGGGCATAC 1708
Query 724 -------------------------------------------------------------------------- 723
Sbjct 1709 AGAACCCCCTGGCAGCCAGTCTTGAGGCAACACCTGCCTTCCGCCTGGCTGACAGCAGGACTAACCCAGCAGGC 1782
Query 724 ------------------------------------------------------------------------ 723
Sbjct 1783 CGCTTCTCGACACAGGAAGAAATCCAGGCCAGGCTGTCTAGTGTAATTGCTAACCAAGACCCTATTGCTGTA 1854
