Nucleotide Global Alignment

Description

Query:
TRCN0000474665
Subject:
XM_017312638.1
Aligned Length:
1388
Identities:
617
Gaps:
667

Alignment

Query    1  ATGTCCGAGCGCAAAGAAGGCAGAGGCAAAGGGAAGGGCAAGAAGAAGGAGCGAGGCTCCGGCAAGAAGCCGGA  74
            |||||.|||||||||||||||||||||||.||||||||||||||||||||.||.||.|||.||..||||||.|.
Sbjct    1  ATGTCTGAGCGCAAAGAAGGCAGAGGCAAGGGGAAGGGCAAGAAGAAGGACCGGGGATCCCGCGGGAAGCCCGC  74

Query   75  GTCCGCGGCGGGCAGCCAGAGCCCAGCCTTGCCTCCCCAATTGAAAGAGATGAAAAGCCAGGAATCGGCTGCAG  148
            |.||||.|..|||..||.|||||||||.|||||||||..||||||||||||||||||||||||.||.|||||||
Sbjct   75  GCCCGCCGAAGGCGACCCGAGCCCAGCATTGCCTCCCAGATTGAAAGAGATGAAAAGCCAGGAGTCAGCTGCAG  148

Query  149  GTTCCAAACTAGTCCTTCGGTGTGAAACCAGTTCTGAATACTCCTCTCTCAGATTCAAGTGGTTCAAGAATGGG  222
            |.|||||.||.||.|||||||||||||||||.|||||.||||||||.|||||||||||.|||||||||||.|||
Sbjct  149  GCTCCAAGCTCGTGCTTCGGTGTGAAACCAGCTCTGAGTACTCCTCACTCAGATTCAAATGGTTCAAGAACGGG  222

Query  223  AATGAATTGAATCGAAAAAACAAACCACAAAATATCAAGATACAAAAAAAGCCAGGGAAGTCAGAACTTCGCAT  296
            |||||..||||.||.|..||.|||||||||||..||||||||||.||.|||||||||||||||||.|||||.||
Sbjct  223  AATGAGCTGAACCGTAGGAATAAACCACAAAACGTCAAGATACAGAAGAAGCCAGGGAAGTCAGAGCTTCGAAT  296

Query  297  TAACAAAGCATCACTGGCTGATTCTGGAGAGTATATGTGCAAAGTGATCAGCAAATTAGGAAATGACAGTGCCT  370
            .||||||||.||.||||||||.||||||||.|||||||||||||||||||||||.||||||||.||||||||||
Sbjct  297  CAACAAAGCGTCCCTGGCTGACTCTGGAGAATATATGTGCAAAGTGATCAGCAAGTTAGGAAACGACAGTGCCT  370

Query  371  CTGCCAATATCACCATCGTGGAATCAAACGAGATCATCACTGGTATGCCAGCCTCAACTGAAGGAGCATATGTG  444
            |||||||.||||||||.||.||.||||||||..|||.||||||.|||.||||||||||||||.||.|.||||||
Sbjct  371  CTGCCAACATCACCATTGTTGAGTCAAACGACCTCACCACTGGCATGTCAGCCTCAACTGAAAGACCCTATGTG  444

Query  445  TCTTCAGAGTCTCCCATTAGAATATCAGTATCCACAGAAGGAGCAAATACTTCTTCATCTACATCTACATCCAC  518
            ||.||||||||||||||||||||||||||.||.||||||||.|||||||||||||||||.||||||||||||||
Sbjct  445  TCCTCAGAGTCTCCCATTAGAATATCAGTTTCAACAGAAGGCGCAAATACTTCTTCATCCACATCTACATCCAC  518

Query  519  CACTGGGACAAGCCATCTTGTAAAATGTGCGGAGAAGGAGAAAACTTTCTGTGTGAATGGAGGGGAGTGCTTCA  592
            .||||||||.||||||||..||||.||||||||||||||||||||||||||||||||||||||.||||||||||
Sbjct  519  GACTGGGACCAGCCATCTCATAAAGTGTGCGGAGAAGGAGAAAACTTTCTGTGTGAATGGAGGCGAGTGCTTCA  592

Query  593  TGGTGAAAGACCTTTCAAACCCCTCGAGATACTTGTGCAAGTGCCCAAATGAGTTTACTGG----TGATCG--C  660
            |||||||.|||||.|||||||||||.|||||||||||||||||||.|..||..||.|||||    .||| |  |
Sbjct  593  TGGTGAAGGACCTGTCAAACCCCTCAAGATACTTGTGCAAGTGCCAACCTGGATTCACTGGAGCAAGAT-GTAC  665

Query  661  TG-------------------CCAAAACTACGTAATGGC----CAGCTTCTAC--------AGTACGTCCACTC  703
            ||                   |||||.|.|.|.||..||    .||| |||||        .||||...||.|.
Sbjct  666  TGAGAATGTGCCCATGAAAGTCCAAACCCAAGAAAAAGCGGAGGAGC-TCTACCAGAAGAGGGTACTGACAATT  738

Query  704  CCT---TTCTGTCTCTGCCTGAA---------------------------------------------------  723
            .||   .|||||.||..||||..                                                   
Sbjct  739  ACTGGCATCTGTATCGCCCTGTTGGTGGTCGGCATCATGTGTGTGGTGGCCTACTGCAAAACCAAGAAACAGCG  812

Query  724  --------------------------------------------------------------------------  723
                                                                                      
Sbjct  813  GCAGAAGCTTCATGATCGGCTCCGGCAGAGCCTTCGGTCAGAACGAAACAACATGGTGAACATAGCGAATGGCC  886

Query  724  --------------------------------------------------------------------------  723
                                                                                      
Sbjct  887  CTCACCATCCAAACCCACCACCAGAGAATGTGCAACTGGTGAATCAATATGTATCTAAAAACGTCATCTCCAGT  960

Query  724  --------------------------------------------------------------------------  723
                                                                                      
Sbjct  961  GAGCATATTGTGGAGAGAGAAGTGGAGACCTCCTTTTCCACCAGTCACTACACTTCCACAGCTCATCACTCCAC  1034

Query  724  --------------------------------------------------------------------------  723
                                                                                      
Sbjct 1035  GACTGTCACCCAGACTCCTAGTCACAGCTGGAGTAATGGGCACACAGAAAGCATCATTTCAGAAAGCCACTCTG  1108

Query  724  --------------------------------------------------------------------------  723
                                                                                      
Sbjct 1109  TAATCATGATGTCATCGGTAGAGAACAGCAGGCACAGCAGCCCAGCTGGGGGCCCACGAGGACGTCTTCATGGC  1182

Query  724  --------------------------------------------------------------------------  723
                                                                                      
Sbjct 1183  CTGGGAGGCCCTCGCGAATGTAACAGCTTCCTCAGGCATGCCAGAGAAACCCCTGACTCCTACAGAGACTCTCC  1256

Query  724  --------------------------------------------------------------------------  723
                                                                                      
Sbjct 1257  TCATAGTGAAAGACATAACCTTATAGCTGAGCTAAGGAGAAACAAGGCTTACAGATCCAAATGCATGCAGATCG  1330

Query  724  --------------------------------------------------------  723
                                                                    
Sbjct 1331  AGCTGTCAGCAACTCATCTTAGATCCTCTTCCATTCCCCATTTGGGCTTCATTCTC  1386