Nucleotide Global Alignment
Description
- Query:
- TRCN0000474679
- Subject:
- XR_926258.3
- Aligned Length:
- 4782
- Identities:
- 728
- Gaps:
- 4038
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCCTTTTAAGAGCTCGTTGATTCCTCTGCAAGGTGGTGCAGCATCCTCTGTCCCTTCATTCATTTCAGATCTAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCAGGTCTCCCTGTAAACAGATCTCTCGGATCAATAAGCATGAATGACGAAGACTACAGCACCATCTATGACAC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AATCCAAAATGAGAGGACGTATGAGGTTCCAGACCAGCCAGAAGAAAATGAAAGTCCCCATTATGATGATGTCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ATGAGTACTTAAGGCCAGAAAATGATTTATATGCCACTCAGCTGAATACCCATGAGTATGATTTTGTGTCAGTC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TATACCATTAAGGGTGAAGAGACCAGCTTGGCCTCTGTCCAGTCAGAAGACAGAGGCTACCTCCTGCCTGATGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GATATACTCTGAACTCCAGGAGGCTCATCCAGGTGAGCCCCAGGAGGACAGGGGCATCTCAATGGAAGGGTTAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ATTCATCAACCCAGGACCAGCAACTCTGCGCAGCAGAACTCCAGGAGAATGGGAGTGTGATGAAGGAAGATCTG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCTTCTCCTTCAAGCTTCACCATTCAGCACAGTAAGGCCTTCTCTACCACCAAGTATTCCTGCTATTCTGATGC 592
Query 1 -------ATGACAGACTCGGCGACAGCTAACGGGGACGACAGGGACCCCGAGATCGAGCTCTTTGTGAAGGCTG 67
.||..|||...||.|..|||| .|||.|.||||.|||||..|.||||||||||||||||
Sbjct 593 TGAAGGTTTGGAAGAAAAGGAGGGAGCT---------CACATGAACCCTGAGATTTACCTCTTTGTGAAGGCTG 657
Query 68 GAATCGATGGAGAAAGCATCGGCAACTGTCCTTTCTCTCAGCGCCTCTTCATGATCCTCTGGCTGAAAGGAGTC 141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 658 GAATCGATGGAGAAAGCATCGGCAACTGTCCTTTCTCTCAGCGCCTCTTCATGATCCTCTGGCTGAAAGGAGTC 731
Query 142 GTGTTCAATGTCACCACTGTGGATCTGAAAAGAAAGCCAGCTGACCTGCACAACCTAGCCCCCGGCACGCACCC 215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 732 GTGTTCAATGTCACCACTGTGGATCTGAAAAGAAAGCCAGCTGACCTGCACAACCTAGCCCCCGGCACGCACCC 805
Query 216 GCCCTTCCTGACCTTCAACGGGGACGTGAAGACAGACGTCAATAAGATCGAGGAGTTCCTGGAGGAGACCTTGA 289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 806 GCCCTTCCTGACCTTCAACGGGGACGTGAAGACAGACGTCAATAAGATCGAGGAGTTCCTGGAGGAGACCTTGA 879
Query 290 CCCCTGAAAAGTACCCCAAACTGGCTGCAAAACACCGGGAATCCAACACAGCGGGCATCGACATCTTTTCCAAG 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 880 CCCCTGAAAAGTACCCCAAACTGGCTGCAAAACACCGGGAATCCAACACAGCGGGCATCGACATCTTTTCCAAG 953
Query 364 TTTTCTGCCTACATCAAAAATACCAAGCAGCAGAACAATGCTGCTCTTGAAAGAGGCCTAACCAAGGCTCTAAA 437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 954 TTTTCTGCCTACATCAAAAATACCAAGCAGCAGAACAATGCTGCTCTTGAAAGAGGCCTAACCAAGGCTCTAAA 1027
Query 438 GAAATTGGATGACTACCTGAACACCCCTCTACCAGAGGAGATTGACGCCAACACTTGTGGGGAAGACAAGGGGT 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1028 GAAATTGGATGACTACCTGAACACCCCTCTACCAGAGGAGATTGACGCCAACACTTGTGGGGAAGACAAGGGGT 1101
Query 512 CCCGGCGCAAGTTCCTGGATGGGGATGAGCTGACCCTGGCTGACTGCAATCTGTTGCCCAAGCTCCATGTGGTC 585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1102 CCCGGCGCAAGTTCCTGGATGGGGATGAGCTGACCCTGGCTGACTGCAATCTGTTGCCCAAGCTCCATGTGGTC 1175
Query 586 AAGATTGTGGCCAAGAAATACCGCAACTATGATATCCCGGCTGAGATGACAGGCCTGTGGCGGTACCTCAAGAA 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1176 AAGATTGTGGCCAAGAAATACCGCAACTATGATATCCCGGCTGAGATGACAGGCCTGTGGCGGTACCTCAAGAA 1249
Query 660 CGCCTATGCCCGTGATGAGTTCACCAACACCTGTGCAGCTGACAGTGAGATCGAGTTGGCCTACGCTGATGTCG 733
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1250 CGCCTATGCCCGTGATGAGTTCACCAACACCTGTGCAGCTGACAGTGAGATCGAGTTGGCCTACGCTGATGTCG 1323
Query 734 CCAAACGCCTCAGCCGATCC------------------------------------------------------ 753
||||||||||||||||||||
Sbjct 1324 CCAAACGCCTCAGCCGATCCTGAGCACAGCCATTTTGCCCCATCCCCGCTGCAGAAGGACTCAACCACTCCCCT 1397
Query 754 -------------------------------------------------------------------------- 753
Sbjct 1398 AAGACTCCAGCTTCATAGACTCCTCTGTATCACTGCCTTGAGGCGCACTTTTTATAATCAAGCCTCATCTTGCT 1471
Query 754 -------------------------------------------------------------------------- 753
Sbjct 1472 GGTATCATGGGAACTCCAGCCTGCTATCTTTCATGAAGTTTCATCTCCTAAAAAGCTTACCCAGCCTGAGCTTG 1545
Query 754 -------------------------------------------------------------------------- 753
Sbjct 1546 GGGACCTGTGCAGAGGAAACTAAGAAAAATGCACTCATCAACTCCTTCTCCCAGTGAACGCCCGGTGAGAAAAT 1619
Query 754 -------------------------------------------------------------------------- 753
Sbjct 1620 CCATTTGCCACAGGCCCTTACCTTCAACAATCCCCCTTCTATAGTGTTCGCTGGTAAAGGGTGAGGCTCCCAAG 1693
Query 754 -------------------------------------------------------------------------- 753
Sbjct 1694 TGCTGGAAAGCCCCTGGACTTGGCTCATTTCTCAGCAAGGGCAGGATAGCACGGGTCCTTTCCATAGAAATATC 1767
Query 754 -------------------------------------------------------------------------- 753
Sbjct 1768 AACAAATTCTAACCCAAGCAATCCCTGGACCTACCTGCCTCCAGGGATCTCTGAAGAAAAAAAGTAACCCATTG 1841
Query 754 -------------------------------------------------------------------------- 753
Sbjct 1842 ATCAAATCAGAGGAGAGGAAGCAGGAGGTCTCCTAGAGCCCATTGAGGAAGAGGAACTTTCTCAGTAGGACACT 1915
Query 754 -------------------------------------------------------------------------- 753
Sbjct 1916 TTATAAGCCTGAGAAAGCTTTGAAAAGGCGGAATGAGTTGATTCATTTCCACCTCAAAAGGAACCTTTCCAGGT 1989
Query 754 -------------------------------------------------------------------------- 753
Sbjct 1990 CCCCCTGGAAATTGTGCCCTGGAGATGTTTAACAAGGAGAACTGGTGAGGAAAGAGTCCTTTTTTACTGTAGGG 2063
Query 754 -------------------------------------------------------------------------- 753
Sbjct 2064 AAAAGCCCCAAACTGGCCTCCTGGGGGATGAGGGCTGAAATGATCCCGAAGGCCTTTTAATTAGTGTGAAATCC 2137
Query 754 -------------------------------------------------------------------------- 753
Sbjct 2138 TGCTGTACTCAGAAATCCTTCCCCGAATTTACAGCACAGGCAGGATGACCTAAGAGGCAGTTTACTTCCCTGAG 2211
Query 754 -------------------------------------------------------------------------- 753
Sbjct 2212 ACCCACAGTTGGGCTGTTCTGGAAACACATCTGTGAATCATAGCCAATTGCCACAGAGAAAACAGAACCAAGCC 2285
Query 754 -------------------------------------------------------------------------- 753
Sbjct 2286 TCCGGTGAGGCCACTCCACCCCAGAGAAGTCTGCAGAATTCCAAGGACTCGGATTGGATGTTCAGAATTCAGCA 2359
Query 754 -------------------------------------------------------------------------- 753
Sbjct 2360 ACTGGAAAGTCCTTAAAAACAAACAGGCCAAACCAAATCAATATTGCTGTTTCTAGATGTCCCTTCTGTGGTTG 2433
Query 754 -------------------------------------------------------------------------- 753
Sbjct 2434 AGCTAGTTTTACAGAGATAAATATATTAAGACAAGGAGGTGGGGGTGTTATATGATCAATGATAGCCATTTGAA 2507
Query 754 -------------------------------------------------------------------------- 753
Sbjct 2508 AGAGAGGGAGGAGTACAGAAGGAAGGCACTTCTGGGTACTTAATTCAGAAATTTCTTTATATTTCAGCACTGGA 2581
Query 754 -------------------------------------------------------------------------- 753
Sbjct 2582 TTATCATATAATGCAAGTGACTATGGACTAAGAGTTAGTTATGGTGTCTTATGACTAGATTTATTATGGTATAT 2655
Query 754 -------------------------------------------------------------------------- 753
Sbjct 2656 TAAAGTAACAATAATATTAATATTACCTTCCTTTTTTTTTTTGTTTCAAAAGAGATCTTTCTCCAGATGCTTCA 2729
Query 754 -------------------------------------------------------------------------- 753
Sbjct 2730 GCCTGTCTGGCCTTCTTATCATATGTGCAGCACATCATGTCTCAGCAACAGTGTGGTGAGGTCCTTAGGTGTCC 2803
Query 754 -------------------------------------------------------------------------- 753
Sbjct 2804 CAAGAACAACTCAGGGAGCACGGGAGGGTCTGCAGTTGGGACCCCACAACTATACAGCTATAGGGTAGGAGGCT 2877
Query 754 -------------------------------------------------------------------------- 753
Sbjct 2878 TCCTTTTCATTGGTCCTGAATGAATACAAATCGCTCAGAAAGCATTTTGGTGGCACAGAAAGGGGATGTATTTG 2951
Query 754 -------------------------------------------------------------------------- 753
Sbjct 2952 TGTTGAGATCTTATTTTATTTTGTATTTATTTATCTTCTTTGACTTGCACAGCACTATTGGGGGTGGGGGAAGC 3025
Query 754 -------------------------------------------------------------------------- 753
Sbjct 3026 AGGGTAGTGGGAGACGAAGGCAGAAGCAAGAGTCAAACTCAGAATGACTGAGTTGAATTCACTGTCTAGTCAGC 3099
Query 754 -------------------------------------------------------------------------- 753
Sbjct 3100 AATGCCTGCTTCTGAGTTTGGCCCAGAGAGAAGGTATTGAGTAAGATTTTAATAACTGTAAAAAGTAAGCTGGA 3173
Query 754 -------------------------------------------------------------------------- 753
Sbjct 3174 TAAGTAAAATCATGATGGATCCAAAGCACAGTTTCTTCATCTCCTGATAAAGAAAGTCAAATGCTTGATAAATT 3247
Query 754 -------------------------------------------------------------------------- 753
Sbjct 3248 CAGAGTCACAGATGTGAGCATAGCTATATTCTTTTAAACGAGAGGTAGAGTGACCTAGCACTAAGCAAATGAGC 3321
Query 754 -------------------------------------------------------------------------- 753
Sbjct 3322 TGAAATGTCGGAAACAGAGTCCATCAGCTTATTTGGCCACACGATCCCAAACTAGTTTTATCTTGGGAAATGGC 3395
Query 754 -------------------------------------------------------------------------- 753
Sbjct 3396 CCTGTCCTCAGCATTCCCTTCTTGTGCTGGTGGGGCCAGTGAAGTCTTGATCTTATCAGAAAAAGGCCACACCA 3469
Query 754 -------------------------------------------------------------------------- 753
Sbjct 3470 AGTGCGAGTTTTCCCAGGCTGACTTTCCAGGCCCTTATCAAATGAAACAACAGAAGCTCTTCACAGTTCTGTGC 3543
Query 754 -------------------------------------------------------------------------- 753
Sbjct 3544 CCCATGGCCACTCCACAGACAGACAATACCAAGCATCTTAGAACTGTCATAAGATAGGTCATGCCTGAAATAGA 3617
Query 754 -------------------------------------------------------------------------- 753
Sbjct 3618 TCTTGACCATATGAGAGTCCCAGAAATCAGCAAGGCCTGGACAAATAGAACTAAGAGAGAGGCAGAGGCAGGAA 3691
Query 754 -------------------------------------------------------------------------- 753
Sbjct 3692 GCTGCGGGTCTATCTTGTAAAGAGTTTAGCATCACTGTGAGAGTGTGTGTCTAAAATTAAATTAAACTAGAAGC 3765
Query 754 -------------------------------------------------------------------------- 753
Sbjct 3766 AGCAGGTGAGTATTTGGTAAGTACTTCTGTGACTCGCCTCAATTCCCACTGGCCAGGGGCCATCTCAACTGCAC 3839
Query 754 -------------------------------------------------------------------------- 753
Sbjct 3840 GGTGAATCAAGATGCTGGTGTCATCCTCCTTGGAAAAAGGAAATGTTAACTCATGGTTAAAACTAAGTACAATG 3913
Query 754 -------------------------------------------------------------------------- 753
Sbjct 3914 ATTCCCAAGGGATCACTTTCTTATTTTTTTAAATGACATTAAGGAGAATCTTAAGAAAGCATCAGAGAAAGACA 3987
Query 754 -------------------------------------------------------------------------- 753
Sbjct 3988 TGTGCATGTGAAGCACCCTGATTCTGATGTTAGGAAAACTTAAGCGAACAGGACCTGCTGCACACAGCCCCATT 4061
Query 754 -------------------------------------------------------------------------- 753
Sbjct 4062 GTCTTCTATCCATTTCTCTTTATCATTCAAATCAAGCAACATGTGCCCTCCTCATCAACACACATTCTTCCCCT 4135
Query 754 -------------------------------------------------------------------------- 753
Sbjct 4136 TTGTCAGTATGCATCTCCCAGCTTAGTGTCAGGATACTTTCGATTCATAATTATGTATGATCCAAAGTGTGCAT 4209
Query 754 -------------------------------------------------------------------------- 753
Sbjct 4210 AATTTCATTTAACGTTAAAGAAATAGATCCAATTCCTTTCTTGCAACCAAAAATAAATAAAATACGTTGCCTCA 4283
Query 754 -------------------------------------------------------------------------- 753
Sbjct 4284 ATATAAGGTTTGGGCTATTCTGTGTTTCTATAGAAGCAATCTGTTTTTGGTAAAATGTACTTTTAAGGATCCAG 4357
Query 754 -------------------------------------------------------------------------- 753
Sbjct 4358 TCATCTGAAGTATTTTATGTAGAGTTAGAGATTTCACAATATTGACTATACATATATTTAAAATATAAATTATC 4431
Query 754 -------------------------------------------------------------------------- 753
Sbjct 4432 CAGCTGATGTTTGAATTTGTCTTACTTTCCTGGCCACCTCGTTGTCCTATTTTATAAGCTGGGGAGTTAACTAG 4505
Query 754 -------------------------------------------------------------------------- 753
Sbjct 4506 CTTAACAAAAGATGCTTAGCTTTTGTAAAAGAACAAGTGTTTCATTTTACAAAGACACTCCAAATGATAGTTAC 4579
Query 754 -------------------------------------------------------------------------- 753
Sbjct 4580 TTGATTTTCTCGAGACCTTTAACTATGGTGATGAATAACAGGACTTGCTTTCAAGCCTTAATAAATGTAAAATG 4653
Query 754 -------------------------------------------------------------------------- 753
Sbjct 4654 CCTTTTAATGAAGATACAGCTGAGTGTTTTCCTCATGAATCTGAACCAATTACCAATTTGTGTTCCAGTCTTGA 4727
Query 754 ---------------------------------------------- 753
Sbjct 4728 TTGGTATTGACTGATTCAAATAAAGTTGGTTTATTTTCAAATATTA 4773