Nucleotide Global Alignment
Description
- Query:
- TRCN0000474694
- Subject:
- NM_001366083.1
- Aligned Length:
- 2253
- Identities:
- 1361
- Gaps:
- 891
Alignment
Query 1 ATGGCGTCCAAAGTCACAGATGCTATAGTCTGGTATCAAAAGAAGATTGGAGCATATGATCAACAAATATGGGA 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGCGTCCAAAGTCACAGATGCTATAGTCTGGTATCAAAAGAAGATTGGAGCATATGATCAACAAATATGGGA 74
Query 75 AAAATCTGTTGAACAGAGAGAAATCAAGTTTATTAAACTGGGGCTAAGGAATAAACCAAAGAAAACAGCACATG 148
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 75 AAAATCTGTTGAACAGAGAGAAATCAA------------GGGGCTAAGGAATAAACCAAAGAAAACAGCACATG 136
Query 149 TGAAACCAGACCTCATAGATGTTGATCTTGTAAGAGGGTCTGCATTTGCAAAGGCAAAGCCTGAAAGTCCTTGG 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 137 TGAAACCAGACCTCATAGATGTTGATCTTGTAAGAGGGTCTGCATTTGCAAAGGCAAAGCCTGAAAGTCCTTGG 210
Query 223 ACTTCTCTGACCAGAAAGGGAATTGTTCGAGTTGTATTTTTCCCCTTTTTCTTCCGGTGGTGGTTACAAGTAAC 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 211 ACTTCTCTGACCAGAAAGGGAATTGTTCGAGTTGTATTTTTCCCCTTTTTCTTCCGGTGGTGGTTACAAGTAAC 284
Query 297 ATCAAAGGTCATCTTTTTCTGGCTTCTTGTCCTTTATCTTCTTCAAGTTGCTGCAATAGTATTATTCTGCTCCA 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 285 ATCAAAGGTCATCTTTTTCTGGCTTCTTGTCCTTTATCTTCTTCAAGTTGCTGCAATAGTATTATTCTGCTCCA 358
Query 371 CTTCTAGCCCACACAGCATACCTCTGACAGAGGTGATTGGGCCGATATGGCTGATGCTGCTCCTGGGAACTGTG 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 359 CTTCTAGCCCACACAGCATACCTCTGACAGAGGTGATTGGGCCGATATGGCTGATGCTGCTCCTGGGAACTGTG 432
Query 445 CATTGCCAGATTGTTTCCACAAGAACACCCAAACCTCCTCTAAGTACAGGGGGTAAAAGAAGAAGGAAATTAAG 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 433 CATTGCCAGATTGTTTCCACAAGAACACCCAAACCTCCTCTAAGTACAGGGGGTAAAAGAAGAAGGAAATTAAG 506
Query 519 AAAAGCAGCCCATTTGGAAGTACATAGGGAAGGAGATGGTTCTAGTACCACAGATAACACACAAGAGGGAGCAG 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 507 AAAAGCAGCCCATTTGGAAGTACATAGGGAAGGAGATGGTTCTAGTACCACAGATAACACACAAGAGGGAGCAG 580
Query 593 TTCAGAACCACGGTACAAGCACCTCTCACAGCGTTGGCACTGTCTTCAGAGATCTCTGGCATGCTGCTTTCTTT 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 581 TTCAGAACCACGGTACAAGCACCTCTCACAGCGTTGGCACTGTCTTCAGAGATCTCTGGCATGCTGCTTTCTTT 654
Query 667 TTATCAGGATCAAAGAAAGCAAAGAATTCAATTGATAAATCAACTGAAACTGACAATGGCTATGTATCCCTTGA 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 655 TTATCAGGATCAAAGAAAGCAAAGAATTCAATTGATAAATCAACTGAAACTGACAATGGCTATGTATCCCTTGA 728
Query 741 TGGGAAGAAGACTGTTAAAAGCGGTGAAGATGGAATACAAAACCATGAACCTCAGTGTGAAACTATTCGACCAG 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 729 TGGGAAGAAGACTGTTAAAAGCGGTGAAGATGGAATACAAAACCATGAACCTCAGTGTGAAACTATTCGACCAG 802
Query 815 AAGAGACAGCCTGGAACACAGGAACACTGAGGAATGGTCCTAGCAAAGATACCCAAAGGACAATAACAAATGTC 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 803 AAGAGACAGCCTGGAACACAGGAACACTGAGGAATGGTCCTAGCAAAGATACCCAAAGGACAATAACAAATGTC 876
Query 889 TCTGATGAAGTCTCCAGTGAGGAAGGTCCTGAAACAGGATACTCATTACGTCGTCATGTGGACAGGACTTCTGA 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 877 TCTGATGAAGTCTCCAGTGAGGAAGGTCCTGAAACAGGATACTCATTACGTCGTCATGTGGACAGGACTTCTGA 950
Query 963 AGGTGTTCTTCGGAATAGAAAGTCACACCATTATAAGAAACATTACCCTAATGAGGACGCCCCTAAATCGGGTA 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 951 AGGTGTTCTTCGGAATAGAAAGTCACACCATTATAAGAAACATTACCCTAATGAGGACGCCCCTAAATCGGGTA 1024
Query 1037 CTAGTTGCAGCTCTCGCTGTTCAAGTTCCAGACAGGATTCTGAGAGTGCAAGGCCAGAATCTGAAACAGAAGAT 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1025 CTAGTTGCAGCTCTCGCTGTTCAAGTTCCAGACAGGATTCTGAGAGTGCAAGGCCAGAATCTGAAACAGAAGAT 1098
Query 1111 GTGTTATGGGAAGACTTGTTACATTGTGCAGAATGCCATTCATCTTGTACCAGTGAGACAGATGTGGAAAATCA 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1099 GTGTTATGGGAAGACTTGTTACATTGTGCAGAATGCCATTCATCTTGTACCAGTGAGACAGATGTGGAAAATCA 1172
Query 1185 TCAGATTAATCCATGTGTGAAAAAAGAATATAGAGATGACCCTTTTCATCAGAGTCATTTGCCCTGGCTCCATA 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1173 TCAGATTAATCCATGTGTGAAAAAAGAATATAGAGATGACCCTTTTCATCAGAGTCATTTGCCCTGGCTCCATA 1246
Query 1259 GTTCCCACCCAGGATTAGAAAAAATAAGTGCTATAGTATGGGAAGGTAATGATTGTAAGAAAGCAGACATGTCT 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1247 GTTCCCACCCAGGATTAGAAAAAATAAGTGCTATAGTATGGGAAGGTAATGATTGTAAGAAAGCAGACATGTCT 1320
Query 1333 GTACTTGAAATCAGTGGAATGATAATGAACAGAGTGAACAGCCATATACCAGGAATAGGATACCAGATTTTTGG 1406
|||||||||||||||||||||||||||||||||||| ||.|||
Sbjct 1321 GTACTTGAAATCAGTGGAATGATAATGAACAGAGTG----------------------------AGTTTT---- 1362
Query 1407 AAATGCAGTCTCTCTCATACTGGGTTTAACTCCATTTGTTTTCCGACTTTCTCAAGCTACAGACTTGGAACAAC 1480
Sbjct 1363 -------------------------------------------------------------------------- 1362
Query 1481 TCACAGCACATTCTGCTTCAGAACTTTATGTGATTGCATTTGGTTCTAATGAAGATGTCATAGTTCTTTCTATG 1554
Sbjct 1363 -------------------------------------------------------------------------- 1362
Query 1555 GTTATAATAAGTTTTGTGGTTCGCGTGTCTCTTGTGTGGATTTTCTTTTTTTTGCTCTGTGTAGCAGAAAGAAC 1628
Sbjct 1363 -------------------------------------------------------------------------- 1362
Query 1629 TTATAAACAGCGATTACTTTTTGCAAAACTCTTTGGACATTTAACATCTGCAAGGAGGGCTCGAAAATCTGAGG 1702
Sbjct 1363 -------------------------------------------------------------------------- 1362
Query 1703 TTCCTCATTTCCGGTTGAAGAAAGTACAGAATATAAAAATGTGGCTATCTCTCCGTTCCTATCTTAAGCGTCGA 1776
Sbjct 1363 -------------------------------------------------------------------------- 1362
Query 1777 GGTCCTCAGCGATCAGTTGATGTAATAGTTTCATCTGCTTTCTTATTGACTATCTCAGTTGTATTTATCTGTTG 1850
Sbjct 1363 -------------------------------------------------------------------------- 1362
Query 1851 TGCCCAGCTACTTCATGTACACGAGATCTTCCTTGATTGTCACTACAATTGGGAATTGGTAATCTGGTGCATCT 1924
Sbjct 1363 -------------------------------------------------------------------------- 1362
Query 1925 CGTTAACACTTTTTCTCCTAAGATTTGTTACCCTTGGATCAGAAACAAGTAAAAAATATAGTAATACCTCAATA 1998
Sbjct 1363 -------------------------------------------------------------------------- 1362
Query 1999 TTACTTACTGAACAGATAAACCTCTACTTGAAAATGGAGAAAAAACCTAACAAAAAGGAGGAACTGACACTAGT 2072
Sbjct 1363 -------------------------------------------------------------------------- 1362
Query 2073 GAATAATGTTTTAAAACTGGCTACTAAACTGCTAAAGGAGTTGGACAGTCCTTTTAGATTATATGGGCTTACAA 2146
Sbjct 1363 -------------------------------------------------------------------------- 1362
Query 2147 TGAATCCGCTGCTTTATAACATCACCCAGGTTGTTATCCTGTCAGCTGTTTCTGGTGTTATCAGTGACTTGCTT 2220
Sbjct 1363 -------------------------------------------------------------------------- 1362
Query 2221 GGATTTAATTTAAAGCTATGGAAGATTAAGTCA 2253
Sbjct 1363 --------------------------------- 1362
