Nucleotide Global Alignment
Description
- Query:
- TRCN0000474723
- Subject:
- NR_027509.1
- Aligned Length:
- 4149
- Identities:
- 906
- Gaps:
- 3112
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TTCGGGCTGACCGCGCCAGTTTGAATGAAAGCTCCGCAAGATGGCGGCGGCCAGGGCCAAGGCACGGGGCAGTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGGCAGGAGCGCGGTGTCACCGGGCTCCAGGTCCGCCCCCGAGGCCCAAGGCCAGGCGAACGGCGAGACGCCGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CGCGCGGAGACCCTGACGGCGCGACGCTCGCGGCCGTCTGCGGGCGAGAGGCGCGCCGGCTCCCAGCGAGCGTG 222
Query 1 -----------------------------------------------------------------ATGGAATAT 9
.||||||||
Sbjct 223 GTCCGGAGCTCCGCGGGCCGCGGTCTTTGGCGACGAGTGTGCACGAGGTGCCTTATTCAAGGGGTGTGGAATAT 296
Query 10 TATCTTGTAAAATGGAAAGGATGGCCAGATTCTACAAATACTTGGGAACCTTTGCAAAATCTGAAGTGCCCGTT 83
||||||||||||||||||||||||||||||||||||||.||.|||||.||.|||..|||.||.|.|||.||...
Sbjct 297 TATCTTGTAAAATGGAAAGGATGGCCAGATTCTACAAACACCTGGGAGCCCTTGAGAAACCTCAGGTGTCCACA 370
Query 84 ACTGCTTCAGCAATTCTCTAATGACAAGCATAATTATTTATCTCAGGTAAAGAAAGGCAAAGCAATAACTCCAA 157
.||.||.|.|||.||||||.||||||||.|.|.|||.|||.||||||.||.||||.||||.||
Sbjct 371 GCTCCTGCGGCAGTTCTCTGATGACAAGAAGACTTACTTAGCTCAGGAAAGGAAATGCAAGGC----------- 433
Query 158 AAGACAATAACAAAA-CTTTGAAACCTGCCATTGCTGAGTACATTGTGAAGAAGGCTAAACAAAGGATAGCTCT 230
.|.|||| .||||| |.|||.|||||||.|||||||||||.|||||..||||.|||||.|||||.||||||||
Sbjct 434 -TGTCAAT-TCAAAATCCTTGCAACCTGCAATTGCTGAGTATATTGTACAGAAAGCTAAGCAAAGAATAGCTCT 505
Query 231 GCAGAGATGGCAAGATGAACTCAACAGAAGAAAGAATCATAAAGGAATGATATTTGTTGAAAATACTGTTGATT 304
||||||||||||||||.|.|||||||||||||||||.|||||.||.|||||||||||||||||.||||||||.|
Sbjct 506 GCAGAGATGGCAAGATTACCTCAACAGAAGAAAGAACCATAAGGGGATGATATTTGTTGAAAACACTGTTGACT 579
Query 305 TAGAGGGCCCACCTTCAGACTTCTATTACATTAACGAATACAAACCAGCTCCTGGAATCAGCTTAGTCAATGAA 378
|.|||||||||||||.|||||||||.|||||||||||.||||..||||||||.||.||||||.||..||.||||
Sbjct 580 TGGAGGGCCCACCTTTAGACTTCTACTACATTAACGAGTACAGGCCAGCTCCCGGGATCAGCATAAACAGTGAA 653
Query 379 GCTACCTTTGGTTGTTCATGCACAGATTGCTTCTTTCAAAAATGTTGTCCTGCTGAAGCTGGAGTTCTTTTGGC 452
||.||||||||.||||||||.|||||.|||||||||.|.||.||||||||||||||||||||||||.|.|||||
Sbjct 654 GCCACCTTTGGATGTTCATGTACAGACTGCTTCTTTGACAAGTGTTGTCCTGCTGAAGCTGGAGTTGTGTTGGC 727
Query 453 TTATAATAAAAACCAACAAATTAAAATCCCACCTGGTACTCCCATCTATGAATGCAACTCAAGGTGTCAGTGTG 526
|||||||||.||.||||||||||||||||.|||.||.|||||||||||.|||||||||||||||||||..||||
Sbjct 728 TTATAATAAGAAGCAACAAATTAAAATCCAACCAGGCACTCCCATCTACGAATGCAACTCAAGGTGTCGATGTG 801
Query 527 GTCCTGATTGTCCCAATAGGATTGTACAAAAAGGCACACAGTATTCGCTTTGCATCTTTCGAACTAGCAATGGA 600
|.|||||.||||||||||||||||||||||||||||||||.|||||.||.|||||||||.|||||||||||||.
Sbjct 802 GACCTGAATGTCCCAATAGGATTGTACAAAAAGGCACACAATATTCACTGTGCATCTTTAGAACTAGCAATGGC 875
Query 601 CGTGGCTGGGGTGTAAAGACCCTTGTGAAGATTAAAAGAATGAGTTTTGTCATGGAATATGTTGGAGAGGTAAT 674
.||||.|||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||.||
Sbjct 876 TGTGGTTGGGGTGTAAAAACCCTTGTGAAGATTAAAAGAATGAGTTTTGTCATGGAATATGTTGGAGAGGTGAT 949
Query 675 CACAAGTGAAGAAGCTGAAAGACGAGGACAGTTCTATGACAACAAGGGAATCACGTATCTCTTTGATCTGGACT 748
||||||||||||.||.||.|||||.||||||||||||||||||||.||.|||||.||.||||||||.|||||||
Sbjct 950 CACAAGTGAAGAGGCCGAGAGACGGGGACAGTTCTATGACAACAAAGGGATCACCTACCTCTTTGACCTGGACT 1023
Query 749 ATGAGTCTGATGAATTCACAGTGGATGCGGCTCGATACGGCAATGTGTCTCATTTTGTGAATCACAGCTGTGAC 822
|.|||||||||||.||||||||||||||.||||||||.||.||.||.||.||||||||||||||.||.||||||
Sbjct 1024 ACGAGTCTGATGAGTTCACAGTGGATGCAGCTCGATATGGAAACGTATCCCATTTTGTGAATCATAGTTGTGAC 1097
Query 823 CCAAATCTTCAGGTGTTCAATGTTTTCATTGATAACCTCGATACTCGTCTTCCCCGAATAGCATTGTTTTCCAC 896
|||||||||||||||||.|.|||||||||.||||||||.||||||||.||.|||.|.|||||||||||.||.||
Sbjct 1098 CCAAATCTTCAGGTGTTTAGTGTTTTCATCGATAACCTTGATACTCGGCTGCCCAGGATAGCATTGTTCTCTAC 1171
Query 897 AAGAACCATAAATGCTGGAGAAGAGCTGACTTTTGATTATCAAATGAAAGGTTCTGGAGATATATCTTCAGATT 970
||||||||||||.|||||||||||||||||||||||.|||||||||||||||||||||||...|||||||||.|
Sbjct 1172 AAGAACCATAAACGCTGGAGAAGAGCTGACTTTTGACTATCAAATGAAAGGTTCTGGAGAAGCATCTTCAGACT 1245
Query 971 CTATTGACCACAGCCCAGCCAAAAAGAGGGTCAGAACAGTATGTAAATGTGGAGCTGTGACTTGCAGAGGTTAC 1044
|.||||||||||||||.||||||||.|||||||||||...|||||||||||||||.|.||||||||||||||||
Sbjct 1246 CCATTGACCACAGCCCTGCCAAAAAAAGGGTCAGAACCCAATGTAAATGTGGAGCCGAGACTTGCAGAGGTTAC 1319
Query 1045 CTCAAC-------------------------------------------------------------------- 1050
||||||
Sbjct 1320 CTCAACTGAAGTGTCAGGAAACGGAGCTCATGAAGAAAAAGCTCATTAGAAGAAAAACAAAACAAAAACTAACA 1393
Query 1051 -------------------------------------------------------------------------- 1050
Sbjct 1394 ATTGAAAAAGTATTTGGGACTCCTTTCTATTACCTACATATTGTATTATATGATGTTAATATACAGTTCATGGC 1467
Query 1051 -------------------------------------------------------------------------- 1050
Sbjct 1468 TCAAGTCATTGCCAAGTATATTACTGTTTATTCTGAAAAGGACTGCGGGGCACATAAACGGTAGATATTTGGTG 1541
Query 1051 -------------------------------------------------------------------------- 1050
Sbjct 1542 GTTAAATGGAAAGTGAACTATGTATAAATCACTGTTTGCTTACTTGAGAAGTCGGAATAGACAATTATTCCCTT 1615
Query 1051 -------------------------------------------------------------------------- 1050
Sbjct 1616 TAGTGTTTGAAAAGTGAGGCTACCACAGTTACTATGAAACCTTTTATCTTGACTCAAACAGATAATCCAATTTA 1689
Query 1051 -------------------------------------------------------------------------- 1050
Sbjct 1690 GGCAAATGTATAAATTTTATTTTTTTACTATATTATTTCTGTTTAATACTCACTGATCAGAGACAAATAAGTGC 1763
Query 1051 -------------------------------------------------------------------------- 1050
Sbjct 1764 TGAATTTTTTACTATATTTTCTACTTTTACATAAAAACATTGGCATCTTAATGATATATTTCAGGTGTAAAAAT 1837
Query 1051 -------------------------------------------------------------------------- 1050
Sbjct 1838 GTGAAAGACTTACTTCTAGCTTGATCTTATTTTGAAGCAATAGATACCATTACAAAGGTTGTATATCTGAACCT 1911
Query 1051 -------------------------------------------------------------------------- 1050
Sbjct 1912 GAAATTCTTAAAAGATTTTTTTTAGTTGCACAGAAGAAAAGCCCCTAATCACCTTCTCTAGAAGTCTATAGTGG 1985
Query 1051 -------------------------------------------------------------------------- 1050
Sbjct 1986 CTGGCCATTGTGCTTCTTTGAACACACAGAACAGTGACTAGGAGGGCCCATTGGAGTGCCAGGCAGAGTGAGCC 2059
Query 1051 -------------------------------------------------------------------------- 1050
Sbjct 2060 ACTCAGCGAGTGGGAGGTCCGCACTGAGTATCTCATCTGAGCAGGAGTGAGATCCGTGAGGGACACAAGCCCCG 2133
Query 1051 -------------------------------------------------------------------------- 1050
Sbjct 2134 ATGACAGTGTAATTCAGGTCACTTGCAGGCACTTTTAATTACTATCCACTACATTTAAATAATTTTGTATTTTG 2207
Query 1051 -------------------------------------------------------------------------- 1050
Sbjct 2208 TGCATGCCCTTTTGAACAGATACTTGTTTTATACAAGAATTTTTTTATAAGATAAAACTTAGCTTGGCCAGAGT 2281
Query 1051 -------------------------------------------------------------------------- 1050
Sbjct 2282 TATGTCTGATTGAATTTTTATTAACTTCTGGGGATTAGATGCGGTTTTTCCCTGTGTAGTAAAACCCAATAAAG 2355
Query 1051 -------------------------------------------------------------------------- 1050
Sbjct 2356 AAAAAACTTACTTTCATCTTTCTGGGTCTGGGAGTTCTAATCATGGTGTCCACTGTGAAGACAAAACAAATGCA 2429
Query 1051 -------------------------------------------------------------------------- 1050
Sbjct 2430 GCAAATAAAGCAAGCTTTTGGTTTCCTAAGAGTTCCCCCGGCTCACTGCTCCAGGCTTTAATAGACTATGATAA 2503
Query 1051 -------------------------------------------------------------------------- 1050
Sbjct 2504 GCGTCAGTAAAATGAACTGAATTCAGGAGCTCAGCATTTCCTTTATCTTCCTAACTCTTGGCCTGGTTTGAGAG 2577
Query 1051 -------------------------------------------------------------------------- 1050
Sbjct 2578 AAGCTACAGTATTACTCAAAATCACCTTCATGGGGCTGCTGTTCACAACAGTACATGCAGAATATCGCCTTCAT 2651
Query 1051 -------------------------------------------------------------------------- 1050
Sbjct 2652 GGGGCTGCTGTTCACAGTACATAGTATTCAGTGTGCATATTTGAGGCCTTGTAGTATGTCTGCTACCCAAAGAT 2725
Query 1051 -------------------------------------------------------------------------- 1050
Sbjct 2726 TTCCGAATTTGTCAAGAAAAAAGTATAATTTTAAATGGCATTTCTTTTGTTTTGAGAATCTTAAAAGCAACACG 2799
Query 1051 -------------------------------------------------------------------------- 1050
Sbjct 2800 GGTATCCCGTCCCATCCCCCCGTCCCACCCCCTAACAACCCCTTGGCCAAGCTCACCTTGAATTATTCTCAGGT 2873
Query 1051 -------------------------------------------------------------------------- 1050
Sbjct 2874 TTAAAGATTAAAAAAAGACAGACAAAACCAAAACCCAGTGTTTGACTGTCTAGATATTTGGTCTTATTTACTGT 2947
Query 1051 -------------------------------------------------------------------------- 1050
Sbjct 2948 TAAGGTTAAAAGGAAACTTAGGAGGGCAAGAAGGAAAATACTGTTTAATAAATATGTGGCTTTGTTTTGTCCTT 3021
Query 1051 -------------------------------------------------------------------------- 1050
Sbjct 3022 ACTAATAGAAATTTAATGTGCCCTTAAGATTTTGTGGGGAGTGGGTAGGCCTTTGGACAGAGTATCTGTAGCCA 3095
Query 1051 -------------------------------------------------------------------------- 1050
Sbjct 3096 GGTTAGCCTTGAATTTACTGTGTAGCTGAGTATTATCGTGAACTCCTCAGCTCTGCCCCCCTACGGCCCAGCGC 3169
Query 1051 -------------------------------------------------------------------------- 1050
Sbjct 3170 TGGGATTGCAGACACGTGCCACCATGCCAGCCTGGAGATTTTTACCTTTAAACACAAACAGACTTCACTCTGAG 3243
Query 1051 -------------------------------------------------------------------------- 1050
Sbjct 3244 TGCCACACATGTAATGGTCATTGCTTCCCTTCACTATTCCATTACTCTTTCCTGCCTCTCAACATTCCCCCATT 3317
Query 1051 -------------------------------------------------------------------------- 1050
Sbjct 3318 ACATCCCTCTCAGACTGTCACCTCATGTTAGCTATTTATACAGGGTATGTGTATGTGTGTGCACATTGTTGTGA 3391
Query 1051 -------------------------------------------------------------------------- 1050
Sbjct 3392 TAAAAGTGATCAATTCAGCTGGAGCCTGATTCCTCACGTCACACGTCCCAAGTATGTAGTGTCTTCAGCAACAT 3465
Query 1051 -------------------------------------------------------------------------- 1050
Sbjct 3466 GTCCTTGGAAATAATCATGACAGGAACTTGAGCAGAGGCTGGAACCATGTAGGAAAGCTAACGCTGCTTCTTGG 3539
Query 1051 -------------------------------------------------------------------------- 1050
Sbjct 3540 CTTACTCTCAGCCAGACTCATGCTCAGCTAGGTTTCTTAGATAGCCCAGGCCCCTCTGCCTAGGAATGGTACTG 3613
Query 1051 -------------------------------------------------------------------------- 1050
Sbjct 3614 CCCACAGTGAGCTAGACCCCGCTACATCAATTACAATTAAGGAAATCCCCACAGACATGCCACAGGCCAATTTT 3687
Query 1051 -------------------------------------------------------------------------- 1050
Sbjct 3688 GATGGAGCCAGTTTCTCAAATGAGGTTACTTTTTCCCAGGTGACCCTAGGCTTGTCAAGTTGTATGAGAAGGTA 3761
Query 1051 -------------------------------------------------------------------------- 1050
Sbjct 3762 TATACAATCAGTTTGCATTTGATTCTTCTCTGAAGTAAAAGTGGCTAGCCTTTAGGATTTTGTGATGTATCTTG 3835
Query 1051 -------------------------------------------------------------------------- 1050
Sbjct 3836 GCATTTTGAAATGTTTTTAACTTTGCTAATTTAGAACTCTTGAAGAATGATGTAGCCACTACAATCAATGCTGC 3909
Query 1051 -------------------------------------------------------------------------- 1050
Sbjct 3910 CCGTTTTAATGCTTTATGTAAAGAGCTTTCCTCATACAGCAGAGTGCTCGAGCATGGACTCTAAAAGCTTCGGG 3983
Query 1051 -------------------------------------------------------------------------- 1050
Sbjct 3984 GTGTGTGTGTCTGTGTGTGTGTGTTGCTTACTAGCTATGTGAACTAACCTTTGTGCCTTAGTTTCATGCCTACC 4057
Query 1051 -------------------------------------------------------------------------- 1050
Sbjct 4058 TCAAAGTATGGTTTCATAGATTAAAGCTTTATAAAGTGGGCTTTTTTTTTAATAACAGAATAAACACCATATGT 4131
Query 1051 ----- 1050
Sbjct 4132 AAAGA 4136
