Nucleotide Global Alignment
Description
- Query:
- TRCN0000474770
- Subject:
- NM_001042617.1
- Aligned Length:
- 4065
- Identities:
- 2128
- Gaps:
- 1737
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCTGGACCCTTCGTCCAGCGAAGAGGAGTCAGATGAGATCCTGGAAGAGGAGAGGGGCAAGGATGTGCTGGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTCGGCCGCGTCTGGAGCGCGCCTGTCTCCCAGCCGCACCAGCGAGGGCTCGGCAGGCAGCGCCGGGATGGGGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCAGTGGCGCCGGGGCCGGGGTGGGCGCCGGCGGCGGTGGGGGTAGCGGCGCGAGCAGCGGCGGCGGGGCCGGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGGCTGCAGCCCAGCAGCCGCGCCGGCGGCGGCCGGCCTTCCAGCCCTAGCCCGTCGGTGGTGAGCGAGAAGGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GAAGGAAGAGTTGGAGAGGCTGCAGAAGGAGGAGGAAGAGAGGAAGAAGAGGCTGCAGCTGTACGTGTTCGTGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGCGCTGCATCGCCTACCCCTTCAACGCCAAGCAGCCCACCGACATGGCTCGGCGGCAGCAGAAGATCAGCAAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CAGCAGCTACAGACTGTCAAAGACCGGTTCCAGGCTTTTCTCAATGGGGAGACCCAAATCGTAGCTGATGAAGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTTTATGAATGCTGTCCAGAGCTACTATGAGGTGTTTCTCAAGAGTGACCGTGTGGCCCGCATGGTGCAGAGTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGGGCTGCTCAGCCAATGACTCTCGGGAGGTCTTCAAGAAACACATCGAGAAGAGGGTGCGCAGCCTACCTGAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ATTGACGGCCTCAGCAAGGAGACAGTGCTAAGCTCTTGGATGGCCAAGTTTGATGCCATCTACCGTGGTGAGGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGACCCCAGGAAGCAGCAAGCCCGGATGACAGCCAGTGCAGCTTCTGAGTTGATTCTGAGCAAGGAACAGCTCT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ATGAGATGTTTCAGAACATTCTTGGGATCAAGAAGTTTGAACATCAACTCCTGTATAATGCCTGTCAGCTGGAC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AATCCAGATGAGCAGGCAGCCCAGATCAGACGAGAGCTGGATGGACGTCTCCAAATGGCAGATCAAATAGCCAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGAACGCAAATTTCCTAAGTTCGTATCCAAAGAAATGGAAAACATGTACATTGAGGAGCTGAAGTCCTCCGTCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ACCTGCTCATGGCCAACTTGGAGAGCATGCCGGTGTCCAAGGGTGGAGAGTTCAAGCTACAGAAACTGAAACGC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AGTCACAATGCTTCCATCATTGACATGGGTGAGGAGAGTGAGAACCAGCTTTCTAAGTCAGATGTCCTGCTGTC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CTTCTCCTTGGAGGTGGTGATCATGGAAGTCCAAGGCCTTAAGTCCTTGGCTCCAAATCGAATTGTATACTGCA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CAATGGAGGTGGAGGGTGGAGAGAAACTTCAGACAGATCAAGCAGAGGCTTCTAAACCAACCTGGGGCACTCAA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GGCGACTTCTCCACAACCCATGCGCTGCCAGCTGTTAAAGTAAAACTATTCACAGAGAGCACTGGTGTCCTGGC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CTTGGAAGACAAGGAACTCGGGCGGGTGATCCTCCATCCCACCCCAAATAGCCCCAAACAATCTGAGTGGCACA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AAATGACAGTCTCCAAAAACTGCCCCGATCAAGACCTCAAAATCAAACTTGCTGTCCGAATGGATAAGCCTCAA 1554
Query 1 ---ATGAAGCATTCTGGGTATTTATGGGCCATCGGTAAGAATGTCTGGAAGAGATGGAAGAAAAGGTTTTTTGT 71
||||||||.||||||||.||||||.||||.|||||||||||.||||||||.||||||||.|||||.|||||
Sbjct 1555 AACATGAAGCACTCTGGGTACTTATGGACCATTGGTAAGAATGTGTGGAAGAGGTGGAAGAAGAGGTTCTTTGT 1628
Query 72 ATTGGTGCAGGTCAGTCAGTACACGTTTGCCATGTGCAGTTATCGGGAGAAGAAAGCGGAGCCTCAGGAACTTC 145
.||||||||||||||.||||||||.||||||||||||||.|||||.||.|||||.||.||||||||||||||.|
Sbjct 1629 GTTGGTGCAGGTCAGCCAGTACACTTTTGCCATGTGCAGCTATCGAGAAAAGAAGGCAGAGCCTCAGGAACTCC 1702
Query 146 TACAATTGGATGGCTACACTGTGGATTACACCGACCCCCAGCCAGGTTTGGAGGGTGGCCGAGCCTTCTTCAAT 219
||||..||||.||||||||.|||||||||||||||||.||||||||||||||||||||||||||||||||||||
Sbjct 1703 TACAGCTGGACGGCTACACCGTGGATTACACCGACCCTCAGCCAGGTTTGGAGGGTGGCCGAGCCTTCTTCAAT 1776
Query 220 GCTGTCAAGGAGGGAGACACCGTGATATTTGCCAGTGACGATGAACAAGACCGCATCCTGTGGGTCCAGGCCAT 293
||.|||||.||.||||||||.|||||||||||.|||||.|||||||||||.||.||..||||||||||.||.||
Sbjct 1777 GCAGTCAAAGAAGGAGACACGGTGATATTTGCAAGTGATGATGAACAAGATCGAATTTTGTGGGTCCAAGCTAT 1850
Query 294 GTATCGGGCCACGGGGCAGTCACACAAGCCTGTGCCCCCGACCCAAGTCCAGAAACTCAACGCCAAGGGAGGAA 367
|||..|||||||.||.|||||.|||||.|||||.|||||.|||||.||.|||||.||||||||||||||.||||
Sbjct 1851 GTACAGGGCCACTGGCCAGTCGCACAAACCTGTTCCCCCTACCCAGGTGCAGAAGCTCAACGCCAAGGGCGGAA 1924
Query 368 ATGTACCTCAGCTGGATGCCCCTATCTCTCAATTTT------------ACGCAGATAGAGCTCAAAAACATGGC 429
||||.|||||||||||||||||.|||||.||||||| ||||||||||||||||.||.||||||
Sbjct 1925 ATGTGCCTCAGCTGGATGCCCCCATCTCACAATTTTCTGGACTGAAGGACGCAGATAGAGCTCAGAAGCATGGC 1998
Query 430 ATGGATGAATTTATCTCTTCCAACCCCTGTAACTTTGACCACGCTTCCCTCTTTGAGATGGTACAACGCCTTAC 503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||.||.||.||
Sbjct 1999 ATGGATGAATTTATCTCTTCCAACCCCTGTAACTTTGACCACGCTTCCCTCTTTGAGATGGTGCAGCGGCTGAC 2072
Query 504 TTTGGATCACAGACTTAATGATTCCTATTCTTGCCTGGGCTGGTTCAGTCCTGGCCAGGTGTTTGTACTAGACG 577
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||..||||.|
Sbjct 2073 TTTGGATCACAGACTTAATGATTCCTATTCTTGCCTGGGCTGGTTCAGTCCTGGCCAGGTGTTTGTGTTAGATG 2146
Query 578 AGTATTGCGCCCGAAATGGAGTCCGGGGGTGTCACCGACATCTCTGCTACCTCAGAGACTTGCTTGAACGGGCA 651
|||||||||||.|||||||||||||.||.||||||||.||||||||||||||.|||||||||||.|||||.|||
Sbjct 2147 AGTATTGCGCCAGAAATGGAGTCCGAGGATGTCACCGGCATCTCTGCTACCTTAGAGACTTGCTGGAACGAGCA 2220
Query 652 GAAAATGGCGCCATGATCGACCCCACCCTTCTTCACTACAGCTTTGCCTTCTGTGCATCCCATGTCCATGGGAA 725
|||||||||||.|||||.||||||||.||||||||||||||||||||||||||.||.||||||||||||||.||
Sbjct 2221 GAAAATGGCGCGATGATTGACCCCACGCTTCTTCACTACAGCTTTGCCTTCTGCGCGTCCCATGTCCATGGTAA 2294
Query 726 CAGGCCTGATGGAATTGGAACTGTGACTGTTGAAGAAAAGGAACGTTTTGAAGAAATCAAAGAGAGGCTCCGAG 799
|||||||||||||||.|||||||||||||||||||||||.|||||.||||||||||||||||||||.|||||||
Sbjct 2295 CAGGCCTGATGGAATCGGAACTGTGACTGTTGAAGAAAAAGAACGCTTTGAAGAAATCAAAGAGAGACTCCGAG 2368
Query 800 TTCTGCTAGAAAATCAGATTACACATTTTAGGTATTGCTTTCCATTTGGTCGACCTGAAGGTGCTTTGAAAGCT 873
|||||||.||||||||.|||||||||||.|||||.|||||||||||||||||||||||||||||||||||||||
Sbjct 2369 TTCTGCTGGAAAATCAAATTACACATTTCAGGTACTGCTTTCCATTTGGTCGACCTGAAGGTGCTTTGAAAGCT 2442
Query 874 ACTCTCTCACTCTTGGAAAGGGTTTTGATGAAAGATATTGTTACCCCAGTGCCACAAGAGGAGGTAAAAACAGT 947
||||||||||||||||||.||||||||||||||||||||||.||.|||||.||||||||.|||||.|||||.||
Sbjct 2443 ACTCTCTCACTCTTGGAACGGGTTTTGATGAAAGATATTGTCACTCCAGTACCACAAGAAGAGGTCAAAACTGT 2516
Query 948 TATCCGTAAATGTCTGGAACAGGCTGCGTTAGTCAACTATTCTCGGCTCTCAGAGTATGCCAAAATCGAAGAGA 1021
.|||||||||||.||.||.||||||||..||||||||||.||.||.||.||.||||||||||||||.|||||||
Sbjct 2517 CATCCGTAAATGCCTAGAGCAGGCTGCTCTAGTCAACTACTCACGCCTATCTGAGTATGCCAAAATTGAAGAGA 2590
Query 1022 ATCAAAAGGATGCAGAAAATGTAGGCCGGTTAATCACTCCTGCCAAAAAGCTTGAAGATACAATACGTCTTGCT 1095
||||||||||||||||||||||||||||.|||||||||||.|||||||||||.|||||.|||||.|||||||||
Sbjct 2591 ATCAAAAGGATGCAGAAAATGTAGGCCGCTTAATCACTCCCGCCAAAAAGCTCGAAGACACAATCCGTCTTGCT 2664
Query 1096 GAACTAGTCATTGAAGTTCTTCAGCAAAATGAGGAGCACCACGC---------------------AGAGGCCTT 1148
|||||||||||.|||||.||.||.|||||.|||||||||||||| |||.|||||
Sbjct 2665 GAACTAGTCATCGAAGTACTGCAACAAAACGAGGAGCACCACGCCGAGCCACATGTTGATAAAGGAGAAGCCTT 2738
Query 1149 TGCGTGGTGGTCAGATTTAATGGTGGAGCATGCGGAGACGTTCCTGTCACTCTTTGCAGTAGACATGGATGCAG 1222
|||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||
Sbjct 2739 TGCGTGGTGGTCAGACTTAATGGTGGAGCATGCGGAGACGTTCCTGTCACTCTTTGCAGTGGACATGGATGCAG 2812
Query 1223 CCTTAGAGGTGCAACCTCCAGACACATGGGACAGTTTTCCACTATTTCAGCTGCTGAATGATTTTCTCCGTACT 1296
||||||||||||||||.||||||||.|||||||||||.|||||.||.||||||||||||||.|||||||||||.
Sbjct 2813 CCTTAGAGGTGCAACCCCCAGACACGTGGGACAGTTTCCCACTCTTCCAGCTGCTGAATGACTTTCTCCGTACA 2886
Query 1297 GACTATAATTTGTGCAATGGAAAATTTCACAAACACCTGCAAGACCTGTTTGCCCCACTTGTTGTTAGATATGT 1370
|||||||||||||||||||||||.|||||||||||||||||.||||||||.|||||||||||||||||||||||
Sbjct 2887 GACTATAATTTGTGCAATGGAAAGTTTCACAAACACCTGCAGGACCTGTTCGCCCCACTTGTTGTTAGATATGT 2960
Query 1371 GGATCTGATGGAGTCCTCAATTGCACAATCCATTCACAGGGGCTTTGAGCGGGAGTCATGGGAACCAGTCA--- 1441
||||||||||||||||||.|||||||||||.||.|||||||||||||||||||||||||||||.|||||||
Sbjct 2961 GGATCTGATGGAGTCCTCCATTGCACAATCTATCCACAGGGGCTTTGAGCGGGAGTCATGGGAGCCAGTCAAGA 3034
Query 1442 -------------------------------------------------------------------------- 1441
Sbjct 3035 GTTTAACCAGTAACCTACCCAATGTGAACCTACCCAATGTGAACCTACCCAAAGTACCAAATCTACCAGTTAAC 3108
Query 1442 ----------------------------------------------------------------------ATAA 1445
||||
Sbjct 3109 ATCCCTCTAGGCATCCCACAGATGCCCACTTTTTCGGCACCGTCATGGATGGCTGCTATATATGATGCTGATAA 3182
Query 1446 TGGGTCAGGCACCTCAGAAGATCTGTTTTGGAAACTTGACGCCCTTCAGACCTTCATTCGGGACCTGCACTGGC 1519
|||.|||||.||.|||||||||.||||.|||||||||||.|||||||||||.|||||.||.|||||.|||||||
Sbjct 3183 TGGATCAGGTACATCAGAAGATTTGTTCTGGAAACTTGATGCCCTTCAGACTTTCATCCGTGACCTACACTGGC 3256
Query 1520 CTGAAGAAGAGTTTGGAAAGCACCTGGAACAACGGCTGAAGTTGATGGCAAGTGACATGATCGAATCTTGTGTC 1593
||||.||||||||||||||.|||.|.||.||.|||||.||..|||||||||||||||||||.||.||.||.|||
Sbjct 3257 CTGAGGAAGAGTTTGGAAAACACTTAGAGCAGCGGCTAAAACTGATGGCAAGTGACATGATTGAGTCCTGCGTC 3330
Query 1594 AAAAGAACCAGGATTGCATTTGAAGTTAAGCTGCAAAAAACCAGTCGATCAACAGATTTTCGAGTCCCACAGTC 1667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3331 AAAAGAACCAGGATTGCATTTGAAGTTAAGCTGCAAAAAACCAGTCGATCAACAGATTTTCGAGTCCCACAGTC 3404
Query 1668 AATATGCACCATGTTTAATGTTATGGTTGATGCCAAAGCTCAATCAACAAAACTTTGCAGCATGGAAATGGGCC 1741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3405 AATATGCACCATGTTTAATGTTATGGTTGATGCCAAAGCTCAATCAACAAAACTTTGCAGCATGGAAATGGGCC 3478
Query 1742 AAGAGCATCAATACCATTCAAAAATAGACGAACTAATTGAAGAAACTGTTAAAGAAATGATAACACTCTTGGTT 1815
||||||||||||||||||||||||||||.|||||||||||||||||.||||||||||||||.|||||.|||||.
Sbjct 3479 AAGAGCATCAATACCATTCAAAAATAGATGAACTAATTGAAGAAACCGTTAAAGAAATGATCACACTTTTGGTG 3552
Query 1816 GCAAAGTTCGTTACTATCTTGGAAGGAGTGCTGGCAAAATTATCCAGATATGACGAAGGGACTTTGTTTTCTTC 1889
||||||||.||.|||||.||||||||.||.||||||||.|||||||||||||||||.|||||||||||||||||
Sbjct 3553 GCAAAGTTTGTAACTATATTGGAAGGCGTACTGGCAAAGTTATCCAGATATGACGAGGGGACTTTGTTTTCTTC 3626
Query 1890 TTTTCTGTCATTTACCGTGAAGGCAGCTTCCAAATATGTGGATGTACCTAAACCCGGGATGGACGTGGCCGACG 1963
.|||||||||||.||.|||||||||||||||||.||||||||.||.||||||||||||||||||||||||||||
Sbjct 3627 GTTTCTGTCATTCACGGTGAAGGCAGCTTCCAAGTATGTGGACGTGCCTAAACCCGGGATGGACGTGGCCGACG 3700
Query 1964 CCTACGTGACTTTCGTCCGCCATTCTCAGGATGTCCTGCGTGATAAGGTCAATGGGGAGATGTACATAGAAAGG 2037
|||||||||||||||||||||||||||||||||||||.||||||||||||||||.|||||||||.|||||||||
Sbjct 3701 CCTACGTGACTTTCGTCCGCCATTCTCAGGATGTCCTTCGTGATAAGGTCAATGAGGAGATGTATATAGAAAGG 3774
Query 2038 TTATTTGATCAATGGTACAACAGCTCCATGAACGTGATCTGCACCTGGTTGACGGACCGGATGGACTTACAGCT 2111
|||||||||||||||||||||||||||||||||.|.||||||||.|||.||||.|||.||||||||.|.|||||
Sbjct 3775 TTATTTGATCAATGGTACAACAGCTCCATGAACATCATCTGCACGTGGCTGACCGACAGGATGGACCTGCAGCT 3848
Query 2112 TCATATTTATCAGTTGAAAACACTAATTAGGATGGTAAAGAAAACCTACAGAGATTTCCGATTGCAAGGGGTCC 2185
.||.|||||.|||.|||||||.||.||.||||||||||||||||||||.|||||||||||||||||||||||||
Sbjct 3849 CCACATTTACCAGCTGAAAACCCTGATCAGGATGGTAAAGAAAACCTATAGAGATTTCCGATTGCAAGGGGTCC 3922
Query 2186 TGGACTCCACCTTAAACAGCAAGACCTATGAAACGATCCGGAACCGTCTCACTGTGGAGGAAGCCACAGCATCA 2259
||||.||||||||||||||||||||||||||.||.|||||.|||||||||||||||||||||||.|||||.|||
Sbjct 3923 TGGATTCCACCTTAAACAGCAAGACCTATGAGACCATCCGAAACCGTCTCACTGTGGAGGAAGCTACAGCGTCA 3996
Query 2260 GTGAGTGAAGGTGGGGGACTGCAGGGCATCAGCATGAAGGACAGCGATGAGGAAGACGAAGAAGACGAT 2328
||||||||.||||||||..|.||.||.|||||||||||||||||.|||||||||||.||||||||.|||
Sbjct 3997 GTGAGTGAGGGTGGGGGCTTACAAGGTATCAGCATGAAGGACAGTGATGAGGAAGATGAAGAAGATGAT 4065
