Nucleotide Global Alignment

Description

Query:
TRCN0000474770
Subject:
XM_006518040.3
Aligned Length:
3975
Identities:
2129
Gaps:
1647

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGCTGGACCCTTCGTCCAGCGAAGAGGAGTCAGATGAGATCCTGGAAGAGGAGAGGGGCAAGGATGTGCTGGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CTCGGCCGCGTCTGGAGCGCGCCTGTCTCCCAGCCGCACCAGCGAGGGCTCGGCAGGCAGCGCCGGGATGGGGG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCAGTGGCGCCGGGGCCGGGGTGGGCGCCGGCGGCGGTGGGGGTAGCGGCGCGAGCAGCGGCGGCGGGGCCGGG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GGGCTGCAGCCCAGCAGCCGCGCCGGCGGCGGCCGGCCTTCCAGCCCTAGCCCGTCGGTGGTGAGCGAGAAGGA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GAAGGAAGAGTTGGAGAGGCTGCAGAAGGAGGAGGAAGAGAGGAAGAAGAGGCTGCAGCTGTACGTGTTCGTGA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TGCGCTGCATCGCCTACCCCTTCAACGCCAAGCAGCCCACCGACATGGCTCGGCGGCAGCAGAAGATCAGCAAA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CAGCAGCTACAGACTGTCAAAGACCGGTTCCAGGCTTTTCTCAATGGGGAGACCCAAATCGTAGCTGATGAAGC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CTTTATGAATGCTGTCCAGAGCTACTATGAGGTGTTTCTCAAGAGTGACCGTGTGGCCCGCATGGTGCAGAGTG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GGGGCTGCTCAGCCAATGACTCTCGGGAGGTCTTCAAGAAACACATCGAGAAGAGGGTGCGCAGCCTACCTGAG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  ATTGACGGCCTCAGCAAGGAGACAGTGCTAAGCTCTTGGATGGCCAAGTTTGATGCCATCTACCGTGGTGAGGA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GGACCCCAGGAAGCAGCAAGCCCGGATGACAGCCAGTGCAGCTTCTGAGTTGATTCTGAGCAAGGAACAGCTCT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  ATGAGATGTTTCAGAACATTCTTGGGATCAAGAAGTTTGAACATCAACTCCTGTATAATGCCTGTCAGCTGGAC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  AATCCAGATGAGCAGGCAGCCCAGATCAGACGAGAGCTGGATGGACGTCTCCAAATGGCAGATCAAATAGCCAG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GGAACGCAAATTTCCTAAGTTCGTATCCAAAGAAATGGAAAACATGTACATTGAGGAGCTGAAGTCCTCCGTCA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  ACCTGCTCATGGCCAACTTGGAGAGCATGCCGGTGTCCAAGGGTGGAGAGTTCAAGCTACAGAAACTGAAACGC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  AGTCACAATGCTTCCATCATTGACATGGGTGAGGAGAGTGAGAACCAGCTTTCTAAGTCAGATGTCCTGCTGTC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  CTTCTCCTTGGAGGTGGTGATCATGGAAGTCCAAGGCCTTAAGTCCTTGGCTCCAAATCGAATTGTATACTGCA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  CAATGGAGGTGGAGGGTGGAGAGAAACTTCAGACAGATCAAGCAGAGGCTTCTAAACCAACCTGGGGCACTCAA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  GGCGACTTCTCCACAACCCATGCGCTGCCAGCTGTTAAAGTAAAACTATTCACAGAGAGCACTGGTGTCCTGGC  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  CTTGGAAGACAAGGAACTCGGGCGGGTGATCCTCCATCCCACCCCAAATAGCCCCAAACAATCTGAGTGGCACA  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  AAATGACAGTCTCCAAAAACTGCCCCGATCAAGACCTCAAAATCAAACTTGCTGTCCGAATGGATAAGCCTCAA  1554

Query    1  ---ATGAAGCATTCTGGGTATTTATGGGCCATCGGTAAGAATGTCTGGAAGAGATGGAAGAAAAGGTTTTTTGT  71
               ||||||||.||||||||.||||||.||||.|||||||||||.||||||||.||||||||.|||||.|||||
Sbjct 1555  AACATGAAGCACTCTGGGTACTTATGGACCATTGGTAAGAATGTGTGGAAGAGGTGGAAGAAGAGGTTCTTTGT  1628

Query   72  ATTGGTGCAGGTCAGTCAGTACACGTTTGCCATGTGCAGTTATCGGGAGAAGAAAGCGGAGCCTCAGGAACTTC  145
            .||||||||||||||.||||||||.||||||||||||||.|||||.||.|||||.||.||||||||||||||.|
Sbjct 1629  GTTGGTGCAGGTCAGCCAGTACACTTTTGCCATGTGCAGCTATCGAGAAAAGAAGGCAGAGCCTCAGGAACTCC  1702

Query  146  TACAATTGGATGGCTACACTGTGGATTACACCGACCCCCAGCCAGGTTTGGAGGGTGGCCGAGCCTTCTTCAAT  219
            ||||..||||.||||||||.|||||||||||||||||.||||||||||||||||||||||||||||||||||||
Sbjct 1703  TACAGCTGGACGGCTACACCGTGGATTACACCGACCCTCAGCCAGGTTTGGAGGGTGGCCGAGCCTTCTTCAAT  1776

Query  220  GCTGTCAAGGAGGGAGACACCGTGATATTTGCCAGTGACGATGAACAAGACCGCATCCTGTGGGTCCAGGCCAT  293
            ||.|||||.||.||||||||.|||||||||||.|||||.|||||||||||.||.||..||||||||||.||.||
Sbjct 1777  GCAGTCAAAGAAGGAGACACGGTGATATTTGCAAGTGATGATGAACAAGATCGAATTTTGTGGGTCCAAGCTAT  1850

Query  294  GTATCGGGCCACGGGGCAGTCACACAAGCCTGTGCCCCCGACCCAAGTCCAGAAACTCAACGCCAAGGGAGGAA  367
            |||..|||||||.||.|||||.|||||.|||||.|||||.|||||.||.|||||.||||||||||||||.||||
Sbjct 1851  GTACAGGGCCACTGGCCAGTCGCACAAACCTGTTCCCCCTACCCAGGTGCAGAAGCTCAACGCCAAGGGCGGAA  1924

Query  368  ATGTACCTCAGCTGGATGCCCCTATCTCTCAATTTT------------ACGCAGATAGAGCTCAAAAACATGGC  429
            ||||.|||||||||||||||||.|||||.|||||||            ||||||||||||||||.||.||||||
Sbjct 1925  ATGTGCCTCAGCTGGATGCCCCCATCTCACAATTTTCTGGACTGAAGGACGCAGATAGAGCTCAGAAGCATGGC  1998

Query  430  ATGGATGAATTTATCTCTTCCAACCCCTGTAACTTTGACCACGCTTCCCTCTTTGAGATGGTACAACGCCTTAC  503
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||.||.||.||
Sbjct 1999  ATGGATGAATTTATCTCTTCCAACCCCTGTAACTTTGACCACGCTTCCCTCTTTGAGATGGTGCAGCGGCTGAC  2072

Query  504  TTTGGATCACAGACTTAATGATTCCTATTCTTGCCTGGGCTGGTTCAGTCCTGGCCAGGTGTTTGTACTAGACG  577
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||..||||.|
Sbjct 2073  TTTGGATCACAGACTTAATGATTCCTATTCTTGCCTGGGCTGGTTCAGTCCTGGCCAGGTGTTTGTGTTAGATG  2146

Query  578  AGTATTGCGCCCGAAATGGAGTCCGGGGGTGTCACCGACATCTCTGCTACCTCAGAGACTTGCTTGAACGGGCA  651
            |||||||||||.|||||||||||||.||.||||||||.||||||||||||||.|||||||||||.|||||.|||
Sbjct 2147  AGTATTGCGCCAGAAATGGAGTCCGAGGATGTCACCGGCATCTCTGCTACCTTAGAGACTTGCTGGAACGAGCA  2220

Query  652  GAAAATGGCGCCATGATCGACCCCACCCTTCTTCACTACAGCTTTGCCTTCTGTGCATCCCATGTCCATGGGAA  725
            |||||||||||.|||||.||||||||.||||||||||||||||||||||||||.||.||||||||||||||.||
Sbjct 2221  GAAAATGGCGCGATGATTGACCCCACGCTTCTTCACTACAGCTTTGCCTTCTGCGCGTCCCATGTCCATGGTAA  2294

Query  726  CAGGCCTGATGGAATTGGAACTGTGACTGTTGAAGAAAAGGAACGTTTTGAAGAAATCAAAGAGAGGCTCCGAG  799
            |||||||||||||||.|||||||||||||||||||||||.|||||.||||||||||||||||||||.|||||||
Sbjct 2295  CAGGCCTGATGGAATCGGAACTGTGACTGTTGAAGAAAAAGAACGCTTTGAAGAAATCAAAGAGAGACTCCGAG  2368

Query  800  TTCTGCTAGAAAATCAGATTACACATTTTAGGTATTGCTTTCCATTTGGTCGACCTGAAGGTGCTTTGAAAGCT  873
            |||||||.||||||||.|||||||||||.|||||.|||||||||||||||||||||||||||||||||||||||
Sbjct 2369  TTCTGCTGGAAAATCAAATTACACATTTCAGGTACTGCTTTCCATTTGGTCGACCTGAAGGTGCTTTGAAAGCT  2442

Query  874  ACTCTCTCACTCTTGGAAAGGGTTTTGATGAAAGATATTGTTACCCCAGTGCCACAAGAGGAGGTAAAAACAGT  947
            ||||||||||||||||||.||||||||||||||||||||||.||.|||||.||||||||.|||||.|||||.||
Sbjct 2443  ACTCTCTCACTCTTGGAACGGGTTTTGATGAAAGATATTGTCACTCCAGTACCACAAGAAGAGGTCAAAACTGT  2516

Query  948  TATCCGTAAATGTCTGGAACAGGCTGCGTTAGTCAACTATTCTCGGCTCTCAGAGTATGCCAAAATCGAAG---  1018
            .|||||||||||.||.||.||||||||..||||||||||.||.||.||.||.||||||||||||||.||||   
Sbjct 2517  CATCCGTAAATGCCTAGAGCAGGCTGCTCTAGTCAACTACTCACGCCTATCTGAGTATGCCAAAATTGAAGGGA  2590

Query 1019  ------------------------------------------------------------------AGAATCAA  1026
                                                                              ||||||||
Sbjct 2591  AAAAGAGAGAAATGTATGAGCATCCTGTCTTCTGCTTGGCCTCCCAAGTGATGGATTTAACCATTCAGAATCAA  2664

Query 1027  AAGGATGCAGAAAATGTAGGCCGGTTAATCACTCCTGCCAAAAAGCTTGAAGATACAATACGTCTTGCTGAACT  1100
            |||||||||||||||||||||||.|||||||||||.|||||||||||.|||||.|||||.||||||||||||||
Sbjct 2665  AAGGATGCAGAAAATGTAGGCCGCTTAATCACTCCCGCCAAAAAGCTCGAAGACACAATCCGTCTTGCTGAACT  2738

Query 1101  AGTCATTGAAGTTCTTCAGCAAAATGAGGAGCACCACGC---------AGAGGCCTTTGCGTGGTGGTCAGATT  1165
            ||||||.|||||.||.||.|||||.||||||||||||||         ||||||||||||||||||||||||.|
Sbjct 2739  AGTCATCGAAGTACTGCAACAAAACGAGGAGCACCACGCCGAGGGGAAAGAGGCCTTTGCGTGGTGGTCAGACT  2812

Query 1166  TAATGGTGGAGCATGCGGAGACGTTCCTGTCACTCTTTGCAGTAGACATGGATGCAGCCTTAGAGGTGCAACCT  1239
            |||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||.
Sbjct 2813  TAATGGTGGAGCATGCGGAGACGTTCCTGTCACTCTTTGCAGTGGACATGGATGCAGCCTTAGAGGTGCAACCC  2886

Query 1240  CCAGACACATGGGACAGTTTTCCACTATTTCAGCTGCTGAATGATTTTCTCCGTACTGACTATAATTTGTGCAA  1313
            ||||||||.|||||||||||.|||||.||.||||||||||||||.|||||||||||.|||||||||||||||||
Sbjct 2887  CCAGACACGTGGGACAGTTTCCCACTCTTCCAGCTGCTGAATGACTTTCTCCGTACAGACTATAATTTGTGCAA  2960

Query 1314  TGGAAAATTTCACAAACACCTGCAAGACCTGTTTGCCCCACTTGTTGTTAGATATGTGGATCTGATGGAGTCCT  1387
            ||||||.|||||||||||||||||.||||||||.||||||||||||||||||||||||||||||||||||||||
Sbjct 2961  TGGAAAGTTTCACAAACACCTGCAGGACCTGTTCGCCCCACTTGTTGTTAGATATGTGGATCTGATGGAGTCCT  3034

Query 1388  CAATTGCACAATCCATTCACAGGGGCTTTGAGCGGGAGTCATGGGAACCAGTCAATAATGGGTCAGGCACCTCA  1461
            |.|||||||||||.||.|||||||||||||||||||||||||||||.||||||||||||||.|||||.||.|||
Sbjct 3035  CCATTGCACAATCTATCCACAGGGGCTTTGAGCGGGAGTCATGGGAGCCAGTCAATAATGGATCAGGTACATCA  3108

Query 1462  GAAGATCTGTTTTGGAAACTTGACGCCCTTCAGACCTTCATTCGGGACCTGCACTGGCCTGAAGAAGAGTTTGG  1535
            ||||||.||||.|||||||||||.|||||||||||.|||||.||.|||||.|||||||||||.|||||||||||
Sbjct 3109  GAAGATTTGTTCTGGAAACTTGATGCCCTTCAGACTTTCATCCGTGACCTACACTGGCCTGAGGAAGAGTTTGG  3182

Query 1536  AAAGCACCTGGAACAACGGCTGAAGTTGATGGCAAGTGACATGATCGAATCTTGTGTCAAAAGAACCAGGATTG  1609
            |||.|||.|.||.||.|||||.||..|||||||||||||||||||.||.||.||.|||||||||||||||||||
Sbjct 3183  AAAACACTTAGAGCAGCGGCTAAAACTGATGGCAAGTGACATGATTGAGTCCTGCGTCAAAAGAACCAGGATTG  3256

Query 1610  CATTTGAAGTTAAGCTGCAAAAAACCAGTCGATCAACAGATTTTCGAGTCCCACAGTCAATATGCACCATGTTT  1683
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3257  CATTTGAAGTTAAGCTGCAAAAAACCAGTCGATCAACAGATTTTCGAGTCCCACAGTCAATATGCACCATGTTT  3330

Query 1684  AATGTTATGGTTGATGCCAAAGCTCAATCAACAAAACTTTGCAGCATGGAAATGGGCCAAGAGCATCAATACCA  1757
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3331  AATGTTATGGTTGATGCCAAAGCTCAATCAACAAAACTTTGCAGCATGGAAATGGGCCAAGAGCATCAATACCA  3404

Query 1758  TTCAAAAATAGACGAACTAATTGAAGAAACTGTTAAAGAAATGATAACACTCTTGGTTGCAAAGTTCGTTACTA  1831
            ||||||||||||.|||||||||||||||||.||||||||||||||.|||||.|||||.||||||||.||.||||
Sbjct 3405  TTCAAAAATAGATGAACTAATTGAAGAAACCGTTAAAGAAATGATCACACTTTTGGTGGCAAAGTTTGTAACTA  3478

Query 1832  TCTTGGAAGGAGTGCTGGCAAAATTATCCAGATATGACGAAGGGACTTTGTTTTCTTCTTTTCTGTCATTTACC  1905
            |.||||||||.||.||||||||.|||||||||||||||||.|||||||||||||||||.|||||||||||.||.
Sbjct 3479  TATTGGAAGGCGTACTGGCAAAGTTATCCAGATATGACGAGGGGACTTTGTTTTCTTCGTTTCTGTCATTCACG  3552

Query 1906  GTGAAGGCAGCTTCCAAATATGTGGATGTACCTAAACCCGGGATGGACGTGGCCGACGCCTACGTGACTTTCGT  1979
            |||||||||||||||||.||||||||.||.||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3553  GTGAAGGCAGCTTCCAAGTATGTGGACGTGCCTAAACCCGGGATGGACGTGGCCGACGCCTACGTGACTTTCGT  3626

Query 1980  CCGCCATTCTCAGGATGTCCTGCGTGATAAGGTCAATGGGGAGATGTACATAGAAAGGTTATTTGATCAATGGT  2053
            |||||||||||||||||||||.||||||||||||||||.|||||||||.|||||||||||||||||||||||||
Sbjct 3627  CCGCCATTCTCAGGATGTCCTTCGTGATAAGGTCAATGAGGAGATGTATATAGAAAGGTTATTTGATCAATGGT  3700

Query 2054  ACAACAGCTCCATGAACGTGATCTGCACCTGGTTGACGGACCGGATGGACTTACAGCTTCATATTTATCAGTTG  2127
            |||||||||||||||||.|.||||||||.|||.||||.|||.||||||||.|.|||||.||.|||||.|||.||
Sbjct 3701  ACAACAGCTCCATGAACATCATCTGCACGTGGCTGACCGACAGGATGGACCTGCAGCTCCACATTTACCAGCTG  3774

Query 2128  AAAACACTAATTAGGATGGTAAAGAAAACCTACAGAGATTTCCGATTGCAAGGGGTCCTGGACTCCACCTTAAA  2201
            |||||.||.||.||||||||||||||||||||.|||||||||||||||||||||||||||||.|||||||||||
Sbjct 3775  AAAACCCTGATCAGGATGGTAAAGAAAACCTATAGAGATTTCCGATTGCAAGGGGTCCTGGATTCCACCTTAAA  3848

Query 2202  CAGCAAGACCTATGAAACGATCCGGAACCGTCTCACTGTGGAGGAAGCCACAGCATCAGTGAGTGAAGGTGGGG  2275
            |||||||||||||||.||.|||||.|||||||||||||||||||||||.|||||.|||||||||||.|||||||
Sbjct 3849  CAGCAAGACCTATGAGACCATCCGAAACCGTCTCACTGTGGAGGAAGCTACAGCGTCAGTGAGTGAGGGTGGGG  3922

Query 2276  GACTGCAGGGCATCAGCATGAAGGACAGCGATGAGGAAGACGAAGAAGACGAT  2328
            |..|.||.||.|||||||||||||||||.|||||||||||.||||||||.|||
Sbjct 3923  GCTTACAAGGTATCAGCATGAAGGACAGTGATGAGGAAGATGAAGAAGATGAT  3975

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