Nucleotide Global Alignment
Description
- Query:
- TRCN0000474770
- Subject:
- XM_017316032.1
- Aligned Length:
- 4044
- Identities:
- 2128
- Gaps:
- 1716
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCTGGACCCTTCGTCCAGCGAAGAGGAGTCAGATGAGATCCTGGAAGAGGAGAGGGGCAAGGATGTGCTGGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTCGGCCGCGTCTGGAGCGCGCCTGTCTCCCAGCCGCACCAGCGAGGGCTCGGCAGGCAGCGCCGGGATGGGGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCAGTGGCGCCGGGGCCGGGGTGGGCGCCGGCGGCGGTGGGGGTAGCGGCGCGAGCAGCGGCGGCGGGGCCGGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGGCTGCAGCCCAGCAGCCGCGCCGGCGGCGGCCGGCCTTCCAGCCCTAGCCCGTCGGTGGTGAGCGAGAAGGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GAAGGAAGAGTTGGAGAGGCTGCAGAAGGAGGAGGAAGAGAGGAAGAAGAGGCTGCAGCTGTACGTGTTCGTGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGCGCTGCATCGCCTACCCCTTCAACGCCAAGCAGCCCACCGACATGGCTCGGCGGCAGCAGAAGATCAGCAAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CAGCAGCTACAGACTGTCAAAGACCGGTTCCAGGCTTTTCTCAATGGGGAGACCCAAATCGTAGCTGATGAAGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTTTATGAATGCTGTCCAGAGCTACTATGAGGTGTTTCTCAAGAGTGACCGTGTGGCCCGCATGGTGCAGAGTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGGGCTGCTCAGCCAATGACTCTCGGGAGGTCTTCAAGAAACACATCGAGAAGAGGGTGCGCAGCCTACCTGAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ATTGACGGCCTCAGCAAGGAGACAGTGCTAAGCTCTTGGATGGCCAAGTTTGATGCCATCTACCGTGGTGAGGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGACCCCAGGAAGCAGCAAGCCCGGATGACAGCCAGTGCAGCTTCTGAGTTGATTCTGAGCAAGGAACAGCTCT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ATGAGATGTTTCAGAACATTCTTGGGATCAAGAAGTTTGAACATCAACTCCTGTATAATGCCTGTCAGCTGGAC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AATCCAGATGAGCAGGCAGCCCAGATCAGACGAGAGCTGGATGGACGTCTCCAAATGGCAGATCAAATAGCCAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGAACGCAAATTTCCTAAGTTCGTATCCAAAGAAATGGAAAACATGTACATTGAGGAGCTGAAGTCCTCCGTCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ACCTGCTCATGGCCAACTTGGAGAGCATGCCGGTGTCCAAGGGTGGAGAGTTCAAGCTACAGAAACTGAAACGC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AGTCACAATGCTTCCATCATTGACATGGGTGAGGAGAGTGAGAACCAGCTTTCTAAGTCAGATGTCCTGCTGTC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CTTCTCCTTGGAGGTGGTGATCATGGAAGTCCAAGGCCTTAAGTCCTTGGCTCCAAATCGAATTGTATACTGCA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CAATGGAGGTGGAGGGTGGAGAGAAACTTCAGACAGATCAAGCAGAGGCTTCTAAACCAACCTGGGGCACTCAA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GGCGACTTCTCCACAACCCATGCGCTGCCAGCTGTTAAAGTAAAACTATTCACAGAGAGCACTGGTGTCCTGGC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CTTGGAAGACAAGGAACTCGGGCGGGTGATCCTCCATCCCACCCCAAATAGCCCCAAACAATCTGAGTGGCACA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AAATGACAGTCTCCAAAAACTGCCCCGATCAAGACCTCAAAATCAAACTTGCTGTCCGAATGGATAAGCCTCAA 1554
Query 1 ---ATGAAGCATTCTGGGTATTTATGGGCCATCGGTAAGAATGTCTGGAAGAGATGGAAGAAAAGGTTTTTTGT 71
||||||||.||||||||.||||||.||||.|||||||||||.||||||||.||||||||.|||||.|||||
Sbjct 1555 AACATGAAGCACTCTGGGTACTTATGGACCATTGGTAAGAATGTGTGGAAGAGGTGGAAGAAGAGGTTCTTTGT 1628
Query 72 ATTGGTGCAGGTCAGTCAGTACACGTTTGCCATGTGCAGTTATCGGGAGAAGAAAGCGGAGCCTCAGGAACTTC 145
.||||||||||||||.||||||||.||||||||||||||.|||||.||.|||||.||.||||||||||||||.|
Sbjct 1629 GTTGGTGCAGGTCAGCCAGTACACTTTTGCCATGTGCAGCTATCGAGAAAAGAAGGCAGAGCCTCAGGAACTCC 1702
Query 146 TACAATTGGATGGCTACACTGTGGATTACACCGACCCCCAGCCAGGTTTGGAGGGTGGCCGAGCCTTCTTCAAT 219
||||..||||.||||||||.|||||||||||||||||.||||||||||||||||||||||||||||||||||||
Sbjct 1703 TACAGCTGGACGGCTACACCGTGGATTACACCGACCCTCAGCCAGGTTTGGAGGGTGGCCGAGCCTTCTTCAAT 1776
Query 220 GCTGTCAAGGAGGGAGACACCGTGATATTTGCCAGTGACGATGAACAAGACCGCATCCTGTGGGTCCAGGCCAT 293
||.|||||.||.||||||||.|||||||||||.|||||.|||||||||||.||.||..||||||||||.||.||
Sbjct 1777 GCAGTCAAAGAAGGAGACACGGTGATATTTGCAAGTGATGATGAACAAGATCGAATTTTGTGGGTCCAAGCTAT 1850
Query 294 GTATCGGGCCACGGGGCAGTCACACAAGCCTGTGCCCCCGACCCAAGTCCAGAAACTCAACGCCAAGGGAGGAA 367
|||..|||||||.||.|||||.|||||.|||||.|||||.|||||.||.|||||.||||||||||||||.||||
Sbjct 1851 GTACAGGGCCACTGGCCAGTCGCACAAACCTGTTCCCCCTACCCAGGTGCAGAAGCTCAACGCCAAGGGCGGAA 1924
Query 368 ATGTACCTCAGCTGGATGCCCCTATCTCTCAATTTT------------ACGCAGATAGAGCTCAAAAACATGGC 429
||||.|||||||||||||||||.|||||.||||||| ||||||||||||||||.||.||||||
Sbjct 1925 ATGTGCCTCAGCTGGATGCCCCCATCTCACAATTTTCTGGACTGAAGGACGCAGATAGAGCTCAGAAGCATGGC 1998
Query 430 ATGGATGAATTTATCTCTTCCAACCCCTGTAACTTTGACCACGCTTCCCTCTTTGAGATGGTACAACGCCTTAC 503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||.||.||.||
Sbjct 1999 ATGGATGAATTTATCTCTTCCAACCCCTGTAACTTTGACCACGCTTCCCTCTTTGAGATGGTGCAGCGGCTGAC 2072
Query 504 TTTGGATCACAGACTTAATGATTCCTATTCTTGCCTGGGCTGGTTCAGTCCTGGCCAGGTGTTTGTACTAGACG 577
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||..||||.|
Sbjct 2073 TTTGGATCACAGACTTAATGATTCCTATTCTTGCCTGGGCTGGTTCAGTCCTGGCCAGGTGTTTGTGTTAGATG 2146
Query 578 AGTATTGCGCCCGAAATGGAGTCCGGGGGTGTCACCGACATCTCTGCTACCTCAGAGACTTGCTTGAACGGGCA 651
|||||||||||.|||||||||||||.||.||||||||.||||||||||||||.|||||||||||.|||||.|||
Sbjct 2147 AGTATTGCGCCAGAAATGGAGTCCGAGGATGTCACCGGCATCTCTGCTACCTTAGAGACTTGCTGGAACGAGCA 2220
Query 652 GAAAATGGCGCCATGATCGACCCCACCCTTCTTCACTACAGCTTTGCCTTCTGTGCATCCCATGTCCATGGGAA 725
|||||||||||.|||||.||||||||.||||||||||||||||||||||||||.||.||||||||||||||.||
Sbjct 2221 GAAAATGGCGCGATGATTGACCCCACGCTTCTTCACTACAGCTTTGCCTTCTGCGCGTCCCATGTCCATGGTAA 2294
Query 726 CAGGCCTGATGGAATTGGAACTGTGACTGTTGAAGAAAAGGAACGTTTTGAAGAAATCAAAGAGAGGCTCCGAG 799
|||||||||||||||.|||||||||||||||||||||||.|||||.||||||||||||||||||||.|||||||
Sbjct 2295 CAGGCCTGATGGAATCGGAACTGTGACTGTTGAAGAAAAAGAACGCTTTGAAGAAATCAAAGAGAGACTCCGAG 2368
Query 800 TTCTGCTAGAAAATCAGATTACACATTTTAGGTATTGCTTTCCATTTGGTCGACCTGAAGGTGCTTTGAAAGCT 873
|||||||.||||||||.|||||||||||.|||||.|||||||||||||||||||||||||||||||||||||||
Sbjct 2369 TTCTGCTGGAAAATCAAATTACACATTTCAGGTACTGCTTTCCATTTGGTCGACCTGAAGGTGCTTTGAAAGCT 2442
Query 874 ACTCTCTCACTCTTGGAAAGGGTTTTGATGAAAGATATTGTTACCCCAGTGCCACAAGAGGAGGTAAAAACAGT 947
||||||||||||||||||.||||||||||||||||||||||.||.|||||.||||||||.|||||.|||||.||
Sbjct 2443 ACTCTCTCACTCTTGGAACGGGTTTTGATGAAAGATATTGTCACTCCAGTACCACAAGAAGAGGTCAAAACTGT 2516
Query 948 TATCCGTAAATGTCTGGAACAGGCTGCGTTAGTCAACTATTCTCGGCTCTCAGAGTATGCCAAAATCGAAGAGA 1021
.|||||||||||.||.||.||||||||..||||||||||.||.||.||.||.||||||||||||||.|||||||
Sbjct 2517 CATCCGTAAATGCCTAGAGCAGGCTGCTCTAGTCAACTACTCACGCCTATCTGAGTATGCCAAAATTGAAGAGA 2590
Query 1022 ATCAAAAGGATGCAGAAAATGTAGGCCGGTTAATCACTCCTGCCAAAAAGCTTGAAGATACAATACGTCTTGCT 1095
||||||||||||||||||||||||||||.|||||||||||.|||||||||||.|||||.|||||.|||||||||
Sbjct 2591 ATCAAAAGGATGCAGAAAATGTAGGCCGCTTAATCACTCCCGCCAAAAAGCTCGAAGACACAATCCGTCTTGCT 2664
Query 1096 GAACTAGTCATTGAAGTTCTTCAGCAAAATGAGGAGCACCACGCAGAGGCCTTTGCGTGGTGGTCAGATTTAAT 1169
|||||||||||.|||||.||.||.|||||.||||||||||||||.|||||||||||||||||||||||.|||||
Sbjct 2665 GAACTAGTCATCGAAGTACTGCAACAAAACGAGGAGCACCACGCCGAGGCCTTTGCGTGGTGGTCAGACTTAAT 2738
Query 1170 GGTGGAGCATGCGGAGACGTTCCTGTCACTCTTTGCAGTAGACATGGATGCAGCCTTAGAGGTGCAACCTCCAG 1243
|||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||.||||
Sbjct 2739 GGTGGAGCATGCGGAGACGTTCCTGTCACTCTTTGCAGTGGACATGGATGCAGCCTTAGAGGTGCAACCCCCAG 2812
Query 1244 ACACATGGGACAGTTTTCCACTATTTCAGCTGCTGAATGATTTTCTCCGTACTGACTATAATTTGTGCAATGGA 1317
||||.|||||||||||.|||||.||.||||||||||||||.|||||||||||.|||||||||||||||||||||
Sbjct 2813 ACACGTGGGACAGTTTCCCACTCTTCCAGCTGCTGAATGACTTTCTCCGTACAGACTATAATTTGTGCAATGGA 2886
Query 1318 AAATTTCACAAACACCTGCAAGACCTGTTTGCCCCACTTGTTGTTAGATATGTGGATCTGATGGAGTCCTCAAT 1391
||.|||||||||||||||||.||||||||.|||||||||||||||||||||||||||||||||||||||||.||
Sbjct 2887 AAGTTTCACAAACACCTGCAGGACCTGTTCGCCCCACTTGTTGTTAGATATGTGGATCTGATGGAGTCCTCCAT 2960
Query 1392 TGCACAATCCATTCACAGGGGCTTTGAGCGGGAGTCATGGGAACCAGTCA------------------------ 1441
|||||||||.||.|||||||||||||||||||||||||||||.|||||||
Sbjct 2961 TGCACAATCTATCCACAGGGGCTTTGAGCGGGAGTCATGGGAGCCAGTCAAGAGTTTAACCAGTAACCTACCCA 3034
Query 1442 -------------------------------------------------------------------------- 1441
Sbjct 3035 ATGTGAACCTACCCAATGTGAACCTACCCAAAGTACCAAATCTACCAGTTAACATCCCTCTAGGCATCCCACAG 3108
Query 1442 -------------------------------------------------ATAATGGGTCAGGCACCTCAGAAGA 1466
|||||||.|||||.||.||||||||
Sbjct 3109 ATGCCCACTTTTTCGGCACCGTCATGGATGGCTGCTATATATGATGCTGATAATGGATCAGGTACATCAGAAGA 3182
Query 1467 TCTGTTTTGGAAACTTGACGCCCTTCAGACCTTCATTCGGGACCTGCACTGGCCTGAAGAAGAGTTTGGAAAGC 1540
|.||||.|||||||||||.|||||||||||.|||||.||.|||||.|||||||||||.||||||||||||||.|
Sbjct 3183 TTTGTTCTGGAAACTTGATGCCCTTCAGACTTTCATCCGTGACCTACACTGGCCTGAGGAAGAGTTTGGAAAAC 3256
Query 1541 ACCTGGAACAACGGCTGAAGTTGATGGCAAGTGACATGATCGAATCTTGTGTCAAAAGAACCAGGATTGCATTT 1614
||.|.||.||.|||||.||..|||||||||||||||||||.||.||.||.||||||||||||||||||||||||
Sbjct 3257 ACTTAGAGCAGCGGCTAAAACTGATGGCAAGTGACATGATTGAGTCCTGCGTCAAAAGAACCAGGATTGCATTT 3330
Query 1615 GAAGTTAAGCTGCAAAAAACCAGTCGATCAACAGATTTTCGAGTCCCACAGTCAATATGCACCATGTTTAATGT 1688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3331 GAAGTTAAGCTGCAAAAAACCAGTCGATCAACAGATTTTCGAGTCCCACAGTCAATATGCACCATGTTTAATGT 3404
Query 1689 TATGGTTGATGCCAAAGCTCAATCAACAAAACTTTGCAGCATGGAAATGGGCCAAGAGCATCAATACCATTCAA 1762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3405 TATGGTTGATGCCAAAGCTCAATCAACAAAACTTTGCAGCATGGAAATGGGCCAAGAGCATCAATACCATTCAA 3478
Query 1763 AAATAGACGAACTAATTGAAGAAACTGTTAAAGAAATGATAACACTCTTGGTTGCAAAGTTCGTTACTATCTTG 1836
|||||||.|||||||||||||||||.||||||||||||||.|||||.|||||.||||||||.||.|||||.|||
Sbjct 3479 AAATAGATGAACTAATTGAAGAAACCGTTAAAGAAATGATCACACTTTTGGTGGCAAAGTTTGTAACTATATTG 3552
Query 1837 GAAGGAGTGCTGGCAAAATTATCCAGATATGACGAAGGGACTTTGTTTTCTTCTTTTCTGTCATTTACCGTGAA 1910
|||||.||.||||||||.|||||||||||||||||.|||||||||||||||||.|||||||||||.||.|||||
Sbjct 3553 GAAGGCGTACTGGCAAAGTTATCCAGATATGACGAGGGGACTTTGTTTTCTTCGTTTCTGTCATTCACGGTGAA 3626
Query 1911 GGCAGCTTCCAAATATGTGGATGTACCTAAACCCGGGATGGACGTGGCCGACGCCTACGTGACTTTCGTCCGCC 1984
||||||||||||.||||||||.||.|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3627 GGCAGCTTCCAAGTATGTGGACGTGCCTAAACCCGGGATGGACGTGGCCGACGCCTACGTGACTTTCGTCCGCC 3700
Query 1985 ATTCTCAGGATGTCCTGCGTGATAAGGTCAATGGGGAGATGTACATAGAAAGGTTATTTGATCAATGGTACAAC 2058
||||||||||||||||.||||||||||||||||.|||||||||.||||||||||||||||||||||||||||||
Sbjct 3701 ATTCTCAGGATGTCCTTCGTGATAAGGTCAATGAGGAGATGTATATAGAAAGGTTATTTGATCAATGGTACAAC 3774
Query 2059 AGCTCCATGAACGTGATCTGCACCTGGTTGACGGACCGGATGGACTTACAGCTTCATATTTATCAGTTGAAAAC 2132
||||||||||||.|.||||||||.|||.||||.|||.||||||||.|.|||||.||.|||||.|||.|||||||
Sbjct 3775 AGCTCCATGAACATCATCTGCACGTGGCTGACCGACAGGATGGACCTGCAGCTCCACATTTACCAGCTGAAAAC 3848
Query 2133 ACTAATTAGGATGGTAAAGAAAACCTACAGAGATTTCCGATTGCAAGGGGTCCTGGACTCCACCTTAAACAGCA 2206
.||.||.||||||||||||||||||||.|||||||||||||||||||||||||||||.||||||||||||||||
Sbjct 3849 CCTGATCAGGATGGTAAAGAAAACCTATAGAGATTTCCGATTGCAAGGGGTCCTGGATTCCACCTTAAACAGCA 3922
Query 2207 AGACCTATGAAACGATCCGGAACCGTCTCACTGTGGAGGAAGCCACAGCATCAGTGAGTGAAGGTGGGGGACTG 2280
||||||||||.||.|||||.|||||||||||||||||||||||.|||||.|||||||||||.||||||||..|.
Sbjct 3923 AGACCTATGAGACCATCCGAAACCGTCTCACTGTGGAGGAAGCTACAGCGTCAGTGAGTGAGGGTGGGGGCTTA 3996
Query 2281 CAGGGCATCAGCATGAAGGACAGCGATGAGGAAGACGAAGAAGACGAT 2328
||.||.|||||||||||||||||.|||||||||||.||||||||.|||
Sbjct 3997 CAAGGTATCAGCATGAAGGACAGTGATGAGGAAGATGAAGAAGATGAT 4044
