Nucleotide Global Alignment
Description
- Query:
- TRCN0000474770
- Subject:
- XM_017316035.1
- Aligned Length:
- 3966
- Identities:
- 2128
- Gaps:
- 1638
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCTGGACCCTTCGTCCAGCGAAGAGGAGTCAGATGAGATCCTGGAAGAGGAGAGGGGCAAGGATGTGCTGGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTCGGCCGCGTCTGGAGCGCGCCTGTCTCCCAGCCGCACCAGCGAGGGCTCGGCAGGCAGCGCCGGGATGGGGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCAGTGGCGCCGGGGCCGGGGTGGGCGCCGGCGGCGGTGGGGGTAGCGGCGCGAGCAGCGGCGGCGGGGCCGGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGGCTGCAGCCCAGCAGCCGCGCCGGCGGCGGCCGGCCTTCCAGCCCTAGCCCGTCGGTGGTGAGCGAGAAGGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GAAGGAAGAGTTGGAGAGGCTGCAGAAGGAGGAGGAAGAGAGGAAGAAGAGGCTGCAGCTGTACGTGTTCGTGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGCGCTGCATCGCCTACCCCTTCAACGCCAAGCAGCCCACCGACATGGCTCGGCGGCAGCAGAAGATCAGCAAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CAGCAGCTACAGACTGTCAAAGACCGGTTCCAGGCTTTTCTCAATGGGGAGACCCAAATCGTAGCTGATGAAGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTTTATGAATGCTGTCCAGAGCTACTATGAGGTGTTTCTCAAGAGTGACCGTGTGGCCCGCATGGTGCAGAGTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGGGCTGCTCAGCCAATGACTCTCGGGAGGTCTTCAAGAAACACATCGAGAAGAGGGTGCGCAGCCTACCTGAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ATTGACGGCCTCAGCAAGGAGACAGTGCTAAGCTCTTGGATGGCCAAGTTTGATGCCATCTACCGTGGTGAGGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGACCCCAGGAAGCAGCAAGCCCGGATGACAGCCAGTGCAGCTTCTGAGTTGATTCTGAGCAAGGAACAGCTCT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ATGAGATGTTTCAGAACATTCTTGGGATCAAGAAGTTTGAACATCAACTCCTGTATAATGCCTGTCAGCTGGAC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AATCCAGATGAGCAGGCAGCCCAGATCAGACGAGAGCTGGATGGACGTCTCCAAATGGCAGATCAAATAGCCAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGAACGCAAATTTCCTAAGTTCGTATCCAAAGAAATGGAAAACATGTACATTGAGGAGCTGAAGTCCTCCGTCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ACCTGCTCATGGCCAACTTGGAGAGCATGCCGGTGTCCAAGGGTGGAGAGTTCAAGCTACAGAAACTGAAACGC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AGTCACAATGCTTCCATCATTGACATGGGTGAGGAGAGTGAGAACCAGCTTTCTAAGTCAGATGTCCTGCTGTC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CTTCTCCTTGGAGGTGGTGATCATGGAAGTCCAAGGCCTTAAGTCCTTGGCTCCAAATCGAATTGTATACTGCA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CAATGGAGGTGGAGGGTGGAGAGAAACTTCAGACAGATCAAGCAGAGGCTTCTAAACCAACCTGGGGCACTCAA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GGCGACTTCTCCACAACCCATGCGCTGCCAGCTGTTAAAGTAAAACTATTCACAGAGAGCACTGGTGTCCTGGC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CTTGGAAGACAAGGAACTCGGGCGGGTGATCCTCCATCCCACCCCAAATAGCCCCAAACAATCTGAGTGGCACA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AAATGACAGTCTCCAAAAACTGCCCCGATCAAGACCTCAAAATCAAACTTGCTGTCCGAATGGATAAGCCTCAA 1554
Query 1 ---ATGAAGCATTCTGGGTATTTATGGGCCATCGGTAAGAATGTCTGGAAGAGATGGAAGAAAAGGTTTTTTGT 71
||||||||.||||||||.||||||.||||.|||||||||||.||||||||.||||||||.|||||.|||||
Sbjct 1555 AACATGAAGCACTCTGGGTACTTATGGACCATTGGTAAGAATGTGTGGAAGAGGTGGAAGAAGAGGTTCTTTGT 1628
Query 72 ATTGGTGCAGGTCAGTCAGTACACGTTTGCCATGTGCAGTTATCGGGAGAAGAAAGCGGAGCCTCAGGAACTTC 145
.||||||||||||||.||||||||.||||||||||||||.|||||.||.|||||.||.||||||||||||||.|
Sbjct 1629 GTTGGTGCAGGTCAGCCAGTACACTTTTGCCATGTGCAGCTATCGAGAAAAGAAGGCAGAGCCTCAGGAACTCC 1702
Query 146 TACAATTGGATGGCTACACTGTGGATTACACCGACCCCCAGCCAGGTTTGGAGGGTGGCCGAGCCTTCTTCAAT 219
||||..||||.||||||||.|||||||||||||||||.||||||||||||||||||||||||||||||||||||
Sbjct 1703 TACAGCTGGACGGCTACACCGTGGATTACACCGACCCTCAGCCAGGTTTGGAGGGTGGCCGAGCCTTCTTCAAT 1776
Query 220 GCTGTCAAGGAGGGAGACACCGTGATATTTGCCAGTGACGATGAACAAGACCGCATCCTGTGGGTCCAGGCCAT 293
||.|||||.||.||||||||.|||||||||||.|||||.|||||||||||.||.||..||||||||||.||.||
Sbjct 1777 GCAGTCAAAGAAGGAGACACGGTGATATTTGCAAGTGATGATGAACAAGATCGAATTTTGTGGGTCCAAGCTAT 1850
Query 294 GTATCGGGCCACGGGGCAGTCACACAAGCCTGTGCCCCCGACCCAAGTCCAGAAACTCAACGCCAAGGGAGGAA 367
|||..|||||||.||.|||||.|||||.|||||.|||||.|||||.||.|||||.||||||||||||||.||||
Sbjct 1851 GTACAGGGCCACTGGCCAGTCGCACAAACCTGTTCCCCCTACCCAGGTGCAGAAGCTCAACGCCAAGGGCGGAA 1924
Query 368 ATGTACCTCAGCTGGATGCCCCTATCTCTCAATTTT------------ACGCAGATAGAGCTCAAAAACATGGC 429
||||.|||||||||||||||||.|||||.||||||| ||||||||||||||||.||.||||||
Sbjct 1925 ATGTGCCTCAGCTGGATGCCCCCATCTCACAATTTTCTGGACTGAAGGACGCAGATAGAGCTCAGAAGCATGGC 1998
Query 430 ATGGATGAATTTATCTCTTCCAACCCCTGTAACTTTGACCACGCTTCCCTCTTTGAGATGGTACAACGCCTTAC 503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||.||.||.||
Sbjct 1999 ATGGATGAATTTATCTCTTCCAACCCCTGTAACTTTGACCACGCTTCCCTCTTTGAGATGGTGCAGCGGCTGAC 2072
Query 504 TTTGGATCACAGACTTAATGATTCCTATTCTTGCCTGGGCTGGTTCAGTCCTGGCCAGGTGTTTGTACTAGACG 577
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||..||||.|
Sbjct 2073 TTTGGATCACAGACTTAATGATTCCTATTCTTGCCTGGGCTGGTTCAGTCCTGGCCAGGTGTTTGTGTTAGATG 2146
Query 578 AGTATTGCGCCCGAAATGGAGTCCGGGGGTGTCACCGACATCTCTGCTACCTCAGAGACTTGCTTGAACGGGCA 651
|||||||||||.|||||||||||||.||.||||||||.||||||||||||||.|||||||||||.|||||.|||
Sbjct 2147 AGTATTGCGCCAGAAATGGAGTCCGAGGATGTCACCGGCATCTCTGCTACCTTAGAGACTTGCTGGAACGAGCA 2220
Query 652 GAAAATGGCGCCATGATCGACCCCACCCTTCTTCACTACAGCTTTGCCTTCTGTGCATCCCATGTCCATGGGAA 725
|||||||||||.|||||.||||||||.||||||||||||||||||||||||||.||.||||||||||||||.||
Sbjct 2221 GAAAATGGCGCGATGATTGACCCCACGCTTCTTCACTACAGCTTTGCCTTCTGCGCGTCCCATGTCCATGGTAA 2294
Query 726 CAGGCCTGATGGAATTGGAACTGTGACTGTTGAAGAAAAGGAACGTTTTGAAGAAATCAAAGAGAGGCTCCGAG 799
|||||||||||||||.|||||||||||||||||||||||.|||||.||||||||||||||||||||.|||||||
Sbjct 2295 CAGGCCTGATGGAATCGGAACTGTGACTGTTGAAGAAAAAGAACGCTTTGAAGAAATCAAAGAGAGACTCCGAG 2368
Query 800 TTCTGCTAGAAAATCAGATTACACATTTTAGGTATTGCTTTCCATTTGGTCGACCTGAAGGTGCTTTGAAAGCT 873
|||||||.||||||||.|||||||||||.|||||.|||||||||||||||||||||||||||||||||||||||
Sbjct 2369 TTCTGCTGGAAAATCAAATTACACATTTCAGGTACTGCTTTCCATTTGGTCGACCTGAAGGTGCTTTGAAAGCT 2442
Query 874 ACTCTCTCACTCTTGGAAAGGGTTTTGATGAAAGATATTGTTACCCCAGTGCCACAAGAGGAGGTAAAAACAGT 947
||||||||||||||||||.||||||||||||||||||||||.||.|||||.||||||||.|||||.|||||.||
Sbjct 2443 ACTCTCTCACTCTTGGAACGGGTTTTGATGAAAGATATTGTCACTCCAGTACCACAAGAAGAGGTCAAAACTGT 2516
Query 948 TATCCGTAAATGTCTGGAACAGGCTGCGTTAGTCAACTATTCTCGGCTCTCAGAGTATGCCAAAATCGAAG--- 1018
.|||||||||||.||.||.||||||||..||||||||||.||.||.||.||.||||||||||||||.||||
Sbjct 2517 CATCCGTAAATGCCTAGAGCAGGCTGCTCTAGTCAACTACTCACGCCTATCTGAGTATGCCAAAATTGAAGGGA 2590
Query 1019 ------------------------------------------------------------------AGAATCAA 1026
||||||||
Sbjct 2591 AAAAGAGAGAAATGTATGAGCATCCTGTCTTCTGCTTGGCCTCCCAAGTGATGGATTTAACCATTCAGAATCAA 2664
Query 1027 AAGGATGCAGAAAATGTAGGCCGGTTAATCACTCCTGCCAAAAAGCTTGAAGATACAATACGTCTTGCTGAACT 1100
|||||||||||||||||||||||.|||||||||||.|||||||||||.|||||.|||||.||||||||||||||
Sbjct 2665 AAGGATGCAGAAAATGTAGGCCGCTTAATCACTCCCGCCAAAAAGCTCGAAGACACAATCCGTCTTGCTGAACT 2738
Query 1101 AGTCATTGAAGTTCTTCAGCAAAATGAGGAGCACCACGCAGAGGCCTTTGCGTGGTGGTCAGATTTAATGGTGG 1174
||||||.|||||.||.||.|||||.||||||||||||||.|||||||||||||||||||||||.||||||||||
Sbjct 2739 AGTCATCGAAGTACTGCAACAAAACGAGGAGCACCACGCCGAGGCCTTTGCGTGGTGGTCAGACTTAATGGTGG 2812
Query 1175 AGCATGCGGAGACGTTCCTGTCACTCTTTGCAGTAGACATGGATGCAGCCTTAGAGGTGCAACCTCCAGACACA 1248
||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||.||||||||.
Sbjct 2813 AGCATGCGGAGACGTTCCTGTCACTCTTTGCAGTGGACATGGATGCAGCCTTAGAGGTGCAACCCCCAGACACG 2886
Query 1249 TGGGACAGTTTTCCACTATTTCAGCTGCTGAATGATTTTCTCCGTACTGACTATAATTTGTGCAATGGAAAATT 1322
|||||||||||.|||||.||.||||||||||||||.|||||||||||.|||||||||||||||||||||||.||
Sbjct 2887 TGGGACAGTTTCCCACTCTTCCAGCTGCTGAATGACTTTCTCCGTACAGACTATAATTTGTGCAATGGAAAGTT 2960
Query 1323 TCACAAACACCTGCAAGACCTGTTTGCCCCACTTGTTGTTAGATATGTGGATCTGATGGAGTCCTCAATTGCAC 1396
|||||||||||||||.||||||||.|||||||||||||||||||||||||||||||||||||||||.|||||||
Sbjct 2961 TCACAAACACCTGCAGGACCTGTTCGCCCCACTTGTTGTTAGATATGTGGATCTGATGGAGTCCTCCATTGCAC 3034
Query 1397 AATCCATTCACAGGGGCTTTGAGCGGGAGTCATGGGAACCAGTCAATAATGGGTCAGGCACCTCAGAAGATCTG 1470
||||.||.|||||||||||||||||||||||||||||.||||||||||||||.|||||.||.|||||||||.||
Sbjct 3035 AATCTATCCACAGGGGCTTTGAGCGGGAGTCATGGGAGCCAGTCAATAATGGATCAGGTACATCAGAAGATTTG 3108
Query 1471 TTTTGGAAACTTGACGCCCTTCAGACCTTCATTCGGGACCTGCACTGGCCTGAAGAAGAGTTTGGAAAGCACCT 1544
||.|||||||||||.|||||||||||.|||||.||.|||||.|||||||||||.||||||||||||||.|||.|
Sbjct 3109 TTCTGGAAACTTGATGCCCTTCAGACTTTCATCCGTGACCTACACTGGCCTGAGGAAGAGTTTGGAAAACACTT 3182
Query 1545 GGAACAACGGCTGAAGTTGATGGCAAGTGACATGATCGAATCTTGTGTCAAAAGAACCAGGATTGCATTTGAAG 1618
.||.||.|||||.||..|||||||||||||||||||.||.||.||.||||||||||||||||||||||||||||
Sbjct 3183 AGAGCAGCGGCTAAAACTGATGGCAAGTGACATGATTGAGTCCTGCGTCAAAAGAACCAGGATTGCATTTGAAG 3256
Query 1619 TTAAGCTGCAAAAAACCAGTCGATCAACAGATTTTCGAGTCCCACAGTCAATATGCACCATGTTTAATGTTATG 1692
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3257 TTAAGCTGCAAAAAACCAGTCGATCAACAGATTTTCGAGTCCCACAGTCAATATGCACCATGTTTAATGTTATG 3330
Query 1693 GTTGATGCCAAAGCTCAATCAACAAAACTTTGCAGCATGGAAATGGGCCAAGAGCATCAATACCATTCAAAAAT 1766
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3331 GTTGATGCCAAAGCTCAATCAACAAAACTTTGCAGCATGGAAATGGGCCAAGAGCATCAATACCATTCAAAAAT 3404
Query 1767 AGACGAACTAATTGAAGAAACTGTTAAAGAAATGATAACACTCTTGGTTGCAAAGTTCGTTACTATCTTGGAAG 1840
|||.|||||||||||||||||.||||||||||||||.|||||.|||||.||||||||.||.|||||.|||||||
Sbjct 3405 AGATGAACTAATTGAAGAAACCGTTAAAGAAATGATCACACTTTTGGTGGCAAAGTTTGTAACTATATTGGAAG 3478
Query 1841 GAGTGCTGGCAAAATTATCCAGATATGACGAAGGGACTTTGTTTTCTTCTTTTCTGTCATTTACCGTGAAGGCA 1914
|.||.||||||||.|||||||||||||||||.|||||||||||||||||.|||||||||||.||.|||||||||
Sbjct 3479 GCGTACTGGCAAAGTTATCCAGATATGACGAGGGGACTTTGTTTTCTTCGTTTCTGTCATTCACGGTGAAGGCA 3552
Query 1915 GCTTCCAAATATGTGGATGTACCTAAACCCGGGATGGACGTGGCCGACGCCTACGTGACTTTCGTCCGCCATTC 1988
||||||||.||||||||.||.|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3553 GCTTCCAAGTATGTGGACGTGCCTAAACCCGGGATGGACGTGGCCGACGCCTACGTGACTTTCGTCCGCCATTC 3626
Query 1989 TCAGGATGTCCTGCGTGATAAGGTCAATGGGGAGATGTACATAGAAAGGTTATTTGATCAATGGTACAACAGCT 2062
||||||||||||.||||||||||||||||.|||||||||.||||||||||||||||||||||||||||||||||
Sbjct 3627 TCAGGATGTCCTTCGTGATAAGGTCAATGAGGAGATGTATATAGAAAGGTTATTTGATCAATGGTACAACAGCT 3700
Query 2063 CCATGAACGTGATCTGCACCTGGTTGACGGACCGGATGGACTTACAGCTTCATATTTATCAGTTGAAAACACTA 2136
||||||||.|.||||||||.|||.||||.|||.||||||||.|.|||||.||.|||||.|||.|||||||.||.
Sbjct 3701 CCATGAACATCATCTGCACGTGGCTGACCGACAGGATGGACCTGCAGCTCCACATTTACCAGCTGAAAACCCTG 3774
Query 2137 ATTAGGATGGTAAAGAAAACCTACAGAGATTTCCGATTGCAAGGGGTCCTGGACTCCACCTTAAACAGCAAGAC 2210
||.||||||||||||||||||||.|||||||||||||||||||||||||||||.||||||||||||||||||||
Sbjct 3775 ATCAGGATGGTAAAGAAAACCTATAGAGATTTCCGATTGCAAGGGGTCCTGGATTCCACCTTAAACAGCAAGAC 3848
Query 2211 CTATGAAACGATCCGGAACCGTCTCACTGTGGAGGAAGCCACAGCATCAGTGAGTGAAGGTGGGGGACTGCAGG 2284
||||||.||.|||||.|||||||||||||||||||||||.|||||.|||||||||||.||||||||..|.||.|
Sbjct 3849 CTATGAGACCATCCGAAACCGTCTCACTGTGGAGGAAGCTACAGCGTCAGTGAGTGAGGGTGGGGGCTTACAAG 3922
Query 2285 GCATCAGCATGAAGGACAGCGATGAGGAAGACGAAGAAGACGAT 2328
|.|||||||||||||||||.|||||||||||.||||||||.|||
Sbjct 3923 GTATCAGCATGAAGGACAGTGATGAGGAAGATGAAGAAGATGAT 3966