Nucleotide Global Alignment
Description
- Query:
- TRCN0000474770
- Subject:
- XM_017316036.1
- Aligned Length:
- 3954
- Identities:
- 2128
- Gaps:
- 1626
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCTGGACCCTTCGTCCAGCGAAGAGGAGTCAGATGAGATCCTGGAAGAGGAGAGGGGCAAGGATGTGCTGGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTCGGCCGCGTCTGGAGCGCGCCTGTCTCCCAGCCGCACCAGCGAGGGCTCGGCAGGCAGCGCCGGGATGGGGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCAGTGGCGCCGGGGCCGGGGTGGGCGCCGGCGGCGGTGGGGGTAGCGGCGCGAGCAGCGGCGGCGGGGCCGGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGGCTGCAGCCCAGCAGCCGCGCCGGCGGCGGCCGGCCTTCCAGCCCTAGCCCGTCGGTGGTGAGCGAGAAGGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GAAGGAAGAGTTGGAGAGGCTGCAGAAGGAGGAGGAAGAGAGGAAGAAGAGGCTGCAGCTGTACGTGTTCGTGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGCGCTGCATCGCCTACCCCTTCAACGCCAAGCAGCCCACCGACATGGCTCGGCGGCAGCAGAAGATCAGCAAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CAGCAGCTACAGACTGTCAAAGACCGGTTCCAGGCTTTTCTCAATGGGGAGACCCAAATCGTAGCTGATGAAGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTTTATGAATGCTGTCCAGAGCTACTATGAGGTGTTTCTCAAGAGTGACCGTGTGGCCCGCATGGTGCAGAGTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGGGCTGCTCAGCCAATGACTCTCGGGAGGTCTTCAAGAAACACATCGAGAAGAGGGTGCGCAGCCTACCTGAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ATTGACGGCCTCAGCAAGGAGACAGTGCTAAGCTCTTGGATGGCCAAGTTTGATGCCATCTACCGTGGTGAGGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGACCCCAGGAAGCAGCAAGCCCGGATGACAGCCAGTGCAGCTTCTGAGTTGATTCTGAGCAAGGAACAGCTCT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ATGAGATGTTTCAGAACATTCTTGGGATCAAGAAGTTTGAACATCAACTCCTGTATAATGCCTGTCAGCTGGAC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AATCCAGATGAGCAGGCAGCCCAGATCAGACGAGAGCTGGATGGACGTCTCCAAATGGCAGATCAAATAGCCAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGAACGCAAATTTCCTAAGTTCGTATCCAAAGAAATGGAAAACATGTACATTGAGGAGCTGAAGTCCTCCGTCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ACCTGCTCATGGCCAACTTGGAGAGCATGCCGGTGTCCAAGGGTGGAGAGTTCAAGCTACAGAAACTGAAACGC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AGTCACAATGCTTCCATCATTGACATGGGTGAGGAGAGTGAGAACCAGCTTTCTAAGTCAGATGTCCTGCTGTC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CTTCTCCTTGGAGGTGGTGATCATGGAAGTCCAAGGCCTTAAGTCCTTGGCTCCAAATCGAATTGTATACTGCA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CAATGGAGGTGGAGGGTGGAGAGAAACTTCAGACAGATCAAGCAGAGGCTTCTAAACCAACCTGGGGCACTCAA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GGCGACTTCTCCACAACCCATGCGCTGCCAGCTGTTAAAGTAAAACTATTCACAGAGAGCACTGGTGTCCTGGC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CTTGGAAGACAAGGAACTCGGGCGGGTGATCCTCCATCCCACCCCAAATAGCCCCAAACAATCTGAGTGGCACA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AAATGACAGTCTCCAAAAACTGCCCCGATCAAGACCTCAAAATCAAACTTGCTGTCCGAATGGATAAGCCTCAA 1554
Query 1 ---ATGAAGCATTCTGGGTATTTATGGGCCATCGGTAAGAATGTCTGGAAGAGATGGAAGAAAAGGTTTTTTGT 71
||||||||.||||||||.||||||.||||.|||||||||||.||||||||.||||||||.|||||.|||||
Sbjct 1555 AACATGAAGCACTCTGGGTACTTATGGACCATTGGTAAGAATGTGTGGAAGAGGTGGAAGAAGAGGTTCTTTGT 1628
Query 72 ATTGGTGCAGGTCAGTCAGTACACGTTTGCCATGTGCAGTTATCGGGAGAAGAAAGCGGAGCCTCAGGAACTTC 145
.||||||||||||||.||||||||.||||||||||||||.|||||.||.|||||.||.||||||||||||||.|
Sbjct 1629 GTTGGTGCAGGTCAGCCAGTACACTTTTGCCATGTGCAGCTATCGAGAAAAGAAGGCAGAGCCTCAGGAACTCC 1702
Query 146 TACAATTGGATGGCTACACTGTGGATTACACCGACCCCCAGCCAGGTTTGGAGGGTGGCCGAGCCTTCTTCAAT 219
||||..||||.||||||||.|||||||||||||||||.||||||||||||||||||||||||||||||||||||
Sbjct 1703 TACAGCTGGACGGCTACACCGTGGATTACACCGACCCTCAGCCAGGTTTGGAGGGTGGCCGAGCCTTCTTCAAT 1776
Query 220 GCTGTCAAGGAGGGAGACACCGTGATATTTGCCAGTGACGATGAACAAGACCGCATCCTGTGGGTCCAGGCCAT 293
||.|||||.||.||||||||.|||||||||||.|||||.|||||||||||.||.||..||||||||||.||.||
Sbjct 1777 GCAGTCAAAGAAGGAGACACGGTGATATTTGCAAGTGATGATGAACAAGATCGAATTTTGTGGGTCCAAGCTAT 1850
Query 294 GTATCGGGCCACGGGGCAGTCACACAAGCCTGTGCCCCCGACCCAAGTCCAGAAACTCAACGCCAAGGGAGGAA 367
|||..|||||||.||.|||||.|||||.|||||.|||||.|||||.||.|||||.||||||||||||||.||||
Sbjct 1851 GTACAGGGCCACTGGCCAGTCGCACAAACCTGTTCCCCCTACCCAGGTGCAGAAGCTCAACGCCAAGGGCGGAA 1924
Query 368 ATGTACCTCAGCTGGATGCCCCTATCTCTCAATTTTACGCAGATAGAGCTCAAAAACATGGCATGGATGAATTT 441
||||.|||||||||||||||||.|||||.|||||||||||||||||||||||.||.||||||||||||||||||
Sbjct 1925 ATGTGCCTCAGCTGGATGCCCCCATCTCACAATTTTACGCAGATAGAGCTCAGAAGCATGGCATGGATGAATTT 1998
Query 442 ATCTCTTCCAACCCCTGTAACTTTGACCACGCTTCCCTCTTTGAGATGGTACAACGCCTTACTTTGGATCACAG 515
||||||||||||||||||||||||||||||||||||||||||||||||||.||.||.||.||||||||||||||
Sbjct 1999 ATCTCTTCCAACCCCTGTAACTTTGACCACGCTTCCCTCTTTGAGATGGTGCAGCGGCTGACTTTGGATCACAG 2072
Query 516 ACTTAATGATTCCTATTCTTGCCTGGGCTGGTTCAGTCCTGGCCAGGTGTTTGTACTAGACGAGTATTGCGCCC 589
||||||||||||||||||||||||||||||||||||||||||||||||||||||..||||.||||||||||||.
Sbjct 2073 ACTTAATGATTCCTATTCTTGCCTGGGCTGGTTCAGTCCTGGCCAGGTGTTTGTGTTAGATGAGTATTGCGCCA 2146
Query 590 GAAATGGAGTCCGGGGGTGTCACCGACATCTCTGCTACCTCAGAGACTTGCTTGAACGGGCAGAAAATGGCGCC 663
|||||||||||||.||.||||||||.||||||||||||||.|||||||||||.|||||.||||||||||||||.
Sbjct 2147 GAAATGGAGTCCGAGGATGTCACCGGCATCTCTGCTACCTTAGAGACTTGCTGGAACGAGCAGAAAATGGCGCG 2220
Query 664 ATGATCGACCCCACCCTTCTTCACTACAGCTTTGCCTTCTGTGCATCCCATGTCCATGGGAACAGGCCTGATGG 737
|||||.||||||||.||||||||||||||||||||||||||.||.||||||||||||||.||||||||||||||
Sbjct 2221 ATGATTGACCCCACGCTTCTTCACTACAGCTTTGCCTTCTGCGCGTCCCATGTCCATGGTAACAGGCCTGATGG 2294
Query 738 AATTGGAACTGTGACTGTTGAAGAAAAGGAACGTTTTGAAGAAATCAAAGAGAGGCTCCGAGTTCTGCTAGAAA 811
|||.|||||||||||||||||||||||.|||||.||||||||||||||||||||.||||||||||||||.||||
Sbjct 2295 AATCGGAACTGTGACTGTTGAAGAAAAAGAACGCTTTGAAGAAATCAAAGAGAGACTCCGAGTTCTGCTGGAAA 2368
Query 812 ATCAGATTACACATTTTAGGTATTGCTTTCCATTTGGTCGACCTGAAGGTGCTTTGAAAGCTACTCTCTCACTC 885
||||.|||||||||||.|||||.|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 ATCAAATTACACATTTCAGGTACTGCTTTCCATTTGGTCGACCTGAAGGTGCTTTGAAAGCTACTCTCTCACTC 2442
Query 886 TTGGAAAGGGTTTTGATGAAAGATATTGTTACCCCAGTGCCACAAGAGGAGGTAAAAACAGTTATCCGTAAATG 959
||||||.||||||||||||||||||||||.||.|||||.||||||||.|||||.|||||.||.|||||||||||
Sbjct 2443 TTGGAACGGGTTTTGATGAAAGATATTGTCACTCCAGTACCACAAGAAGAGGTCAAAACTGTCATCCGTAAATG 2516
Query 960 TCTGGAACAGGCTGCGTTAGTCAACTATTCTCGGCTCTCAGAGTATGCCAAAATCGAAG--------------- 1018
.||.||.||||||||..||||||||||.||.||.||.||.||||||||||||||.||||
Sbjct 2517 CCTAGAGCAGGCTGCTCTAGTCAACTACTCACGCCTATCTGAGTATGCCAAAATTGAAGGGAAAAAGAGAGAAA 2590
Query 1019 ------------------------------------------------------AGAATCAAAAGGATGCAGAA 1038
||||||||||||||||||||
Sbjct 2591 TGTATGAGCATCCTGTCTTCTGCTTGGCCTCCCAAGTGATGGATTTAACCATTCAGAATCAAAAGGATGCAGAA 2664
Query 1039 AATGTAGGCCGGTTAATCACTCCTGCCAAAAAGCTTGAAGATACAATACGTCTTGCTGAACTAGTCATTGAAGT 1112
|||||||||||.|||||||||||.|||||||||||.|||||.|||||.||||||||||||||||||||.|||||
Sbjct 2665 AATGTAGGCCGCTTAATCACTCCCGCCAAAAAGCTCGAAGACACAATCCGTCTTGCTGAACTAGTCATCGAAGT 2738
Query 1113 TCTTCAGCAAAATGAGGAGCACCACGCAGAGGCCTTTGCGTGGTGGTCAGATTTAATGGTGGAGCATGCGGAGA 1186
.||.||.|||||.||||||||||||||.|||||||||||||||||||||||.||||||||||||||||||||||
Sbjct 2739 ACTGCAACAAAACGAGGAGCACCACGCCGAGGCCTTTGCGTGGTGGTCAGACTTAATGGTGGAGCATGCGGAGA 2812
Query 1187 CGTTCCTGTCACTCTTTGCAGTAGACATGGATGCAGCCTTAGAGGTGCAACCTCCAGACACATGGGACAGTTTT 1260
||||||||||||||||||||||.|||||||||||||||||||||||||||||.||||||||.|||||||||||.
Sbjct 2813 CGTTCCTGTCACTCTTTGCAGTGGACATGGATGCAGCCTTAGAGGTGCAACCCCCAGACACGTGGGACAGTTTC 2886
Query 1261 CCACTATTTCAGCTGCTGAATGATTTTCTCCGTACTGACTATAATTTGTGCAATGGAAAATTTCACAAACACCT 1334
|||||.||.||||||||||||||.|||||||||||.|||||||||||||||||||||||.||||||||||||||
Sbjct 2887 CCACTCTTCCAGCTGCTGAATGACTTTCTCCGTACAGACTATAATTTGTGCAATGGAAAGTTTCACAAACACCT 2960
Query 1335 GCAAGACCTGTTTGCCCCACTTGTTGTTAGATATGTGGATCTGATGGAGTCCTCAATTGCACAATCCATTCACA 1408
|||.||||||||.|||||||||||||||||||||||||||||||||||||||||.|||||||||||.||.||||
Sbjct 2961 GCAGGACCTGTTCGCCCCACTTGTTGTTAGATATGTGGATCTGATGGAGTCCTCCATTGCACAATCTATCCACA 3034
Query 1409 GGGGCTTTGAGCGGGAGTCATGGGAACCAGTCAATAATGGGTCAGGCACCTCAGAAGATCTGTTTTGGAAACTT 1482
|||||||||||||||||||||||||.||||||||||||||.|||||.||.|||||||||.||||.|||||||||
Sbjct 3035 GGGGCTTTGAGCGGGAGTCATGGGAGCCAGTCAATAATGGATCAGGTACATCAGAAGATTTGTTCTGGAAACTT 3108
Query 1483 GACGCCCTTCAGACCTTCATTCGGGACCTGCACTGGCCTGAAGAAGAGTTTGGAAAGCACCTGGAACAACGGCT 1556
||.|||||||||||.|||||.||.|||||.|||||||||||.||||||||||||||.|||.|.||.||.|||||
Sbjct 3109 GATGCCCTTCAGACTTTCATCCGTGACCTACACTGGCCTGAGGAAGAGTTTGGAAAACACTTAGAGCAGCGGCT 3182
Query 1557 GAAGTTGATGGCAAGTGACATGATCGAATCTTGTGTCAAAAGAACCAGGATTGCATTTGAAGTTAAGCTGCAAA 1630
.||..|||||||||||||||||||.||.||.||.||||||||||||||||||||||||||||||||||||||||
Sbjct 3183 AAAACTGATGGCAAGTGACATGATTGAGTCCTGCGTCAAAAGAACCAGGATTGCATTTGAAGTTAAGCTGCAAA 3256
Query 1631 AAACCAGTCGATCAACAGATTTTCGAGTCCCACAGTCAATATGCACCATGTTTAATGTTATGGTTGATGCCAAA 1704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3257 AAACCAGTCGATCAACAGATTTTCGAGTCCCACAGTCAATATGCACCATGTTTAATGTTATGGTTGATGCCAAA 3330
Query 1705 GCTCAATCAACAAAACTTTGCAGCATGGAAATGGGCCAAGAGCATCAATACCATTCAAAAATAGACGAACTAAT 1778
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||
Sbjct 3331 GCTCAATCAACAAAACTTTGCAGCATGGAAATGGGCCAAGAGCATCAATACCATTCAAAAATAGATGAACTAAT 3404
Query 1779 TGAAGAAACTGTTAAAGAAATGATAACACTCTTGGTTGCAAAGTTCGTTACTATCTTGGAAGGAGTGCTGGCAA 1852
|||||||||.||||||||||||||.|||||.|||||.||||||||.||.|||||.||||||||.||.|||||||
Sbjct 3405 TGAAGAAACCGTTAAAGAAATGATCACACTTTTGGTGGCAAAGTTTGTAACTATATTGGAAGGCGTACTGGCAA 3478
Query 1853 AATTATCCAGATATGACGAAGGGACTTTGTTTTCTTCTTTTCTGTCATTTACCGTGAAGGCAGCTTCCAAATAT 1926
|.|||||||||||||||||.|||||||||||||||||.|||||||||||.||.|||||||||||||||||.|||
Sbjct 3479 AGTTATCCAGATATGACGAGGGGACTTTGTTTTCTTCGTTTCTGTCATTCACGGTGAAGGCAGCTTCCAAGTAT 3552
Query 1927 GTGGATGTACCTAAACCCGGGATGGACGTGGCCGACGCCTACGTGACTTTCGTCCGCCATTCTCAGGATGTCCT 2000
|||||.||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3553 GTGGACGTGCCTAAACCCGGGATGGACGTGGCCGACGCCTACGTGACTTTCGTCCGCCATTCTCAGGATGTCCT 3626
Query 2001 GCGTGATAAGGTCAATGGGGAGATGTACATAGAAAGGTTATTTGATCAATGGTACAACAGCTCCATGAACGTGA 2074
.||||||||||||||||.|||||||||.||||||||||||||||||||||||||||||||||||||||||.|.|
Sbjct 3627 TCGTGATAAGGTCAATGAGGAGATGTATATAGAAAGGTTATTTGATCAATGGTACAACAGCTCCATGAACATCA 3700
Query 2075 TCTGCACCTGGTTGACGGACCGGATGGACTTACAGCTTCATATTTATCAGTTGAAAACACTAATTAGGATGGTA 2148
|||||||.|||.||||.|||.||||||||.|.|||||.||.|||||.|||.|||||||.||.||.|||||||||
Sbjct 3701 TCTGCACGTGGCTGACCGACAGGATGGACCTGCAGCTCCACATTTACCAGCTGAAAACCCTGATCAGGATGGTA 3774
Query 2149 AAGAAAACCTACAGAGATTTCCGATTGCAAGGGGTCCTGGACTCCACCTTAAACAGCAAGACCTATGAAACGAT 2222
|||||||||||.|||||||||||||||||||||||||||||.||||||||||||||||||||||||||.||.||
Sbjct 3775 AAGAAAACCTATAGAGATTTCCGATTGCAAGGGGTCCTGGATTCCACCTTAAACAGCAAGACCTATGAGACCAT 3848
Query 2223 CCGGAACCGTCTCACTGTGGAGGAAGCCACAGCATCAGTGAGTGAAGGTGGGGGACTGCAGGGCATCAGCATGA 2296
|||.|||||||||||||||||||||||.|||||.|||||||||||.||||||||..|.||.||.||||||||||
Sbjct 3849 CCGAAACCGTCTCACTGTGGAGGAAGCTACAGCGTCAGTGAGTGAGGGTGGGGGCTTACAAGGTATCAGCATGA 3922
Query 2297 AGGACAGCGATGAGGAAGACGAAGAAGACGAT 2328
|||||||.|||||||||||.||||||||.|||
Sbjct 3923 AGGACAGTGATGAGGAAGATGAAGAAGATGAT 3954
