Nucleotide Global Alignment

Description

Query:
TRCN0000474779
Subject:
XR_001782570.1
Aligned Length:
3734
Identities:
687
Gaps:
2971

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCACATCGCAGAGGGTAAAGTCCGGTTATAATTAGAAAGTATCTATGGCCTTTAAGATTGAACACAAAGTCGAG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GATACTTCTCGAACTTGAGACCAAGTCTTCACTAGCGCCAATTGTTGACCACTACTCTGGTCGATACGCCATTT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GTTATCCCCAAATCAAATACGGAGGGGAAGGGAATAGGGGCACCGTTGAAGAGGAAGGGCAGTGAGAAGAACCA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CACTTTTCTAAAAATTCTTCAAATCCCAGGGCTCTTGACAGCAAGGAGGAGAGAGGTGGGCTTAAGTTTTCCAA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  ATCAAACAAACGTCTTTATCCTACAACTCTGCCCGGTAGTTAAAAGTCAGTTGCTTCTTTTCTCGTACAGGCTA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  AGCAGAAAATTGCTAAGCAGCCTCTGATTTATATAGCTATGGAAACGGACTCTCCTAGATTCCCTCAAGTTATT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CAAATTGTTAGTAAAAGGTGACTGGACCGCCTACACGACTTCGAGAGGCCCCACAACCACTAGCATCATAATCC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CCAAATTCCTCGCCGCAGCCCGATCCAGGGCATCTCATCTGCAGTTACGCCCTACGGGAACAAGTCTCTGAGCC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CGAACCGCACAGATTTTATACCCAACAGGTCCCTTCTTTAAGGCGGAATATCTCTTGAGCATCATCGGAACGTT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TTCCCTCATCAAAGGGAGCAGGAACCAGCTTGTCTTCAACCTGAGGAGTCCGCAGAGGGCCGAACAATAAGAAC  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  AGTGCGGAAAATACGGAATCGAAGCCAGACAGACCACCCCCGCCTTTTTTTTTTTTTTTTTTTGTTTCTGCCTT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TCGAGGGGCATGGGAAGGTGTGCCCGGAATGCTTCCGGCGCTGGAGCGCGCTGGCCCTTTAAGCAGGAGCTCGG  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GGAGCGGCCCAGGTATGGGGCGGGCCCAGGGGCGGGCGAGCCCTGAGCCGGCGCGGTCTCGTAGCCGGATTTGG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AGCGCGGCGCCGGCGGGGGCCGGAGGGGGCGGCGCGGCGGACCTCGGTGGCCTCGGACGCTCCTCCTCGAGAGC  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  GGCCGCCGCCCGCCTCCGCCCGCTCTAGCAGCTCTCTCGCCCCGGCCGGCAGCCGCCGCCGCTCCAGGCCGCTC  1110

Query    1  ------------------------------------------------------ATGAAGGACCGTCTGGAGCA  20
                                                                  |||||||||||.||||||||
Sbjct 1111  ACTTGGGACGCGCTCACCTGAGACAAGGCGCCCGCCGCCCTCACCTGGGCCAGGATGAAGGACCGGCTGGAGCA  1184

Query   21  GCTGAAGGCCAAGCAGCTGACACAGGATGATGATACTGATGCGGTTGAGATTGCTATCGACAACACGGCTTTTA  94
            |||||||||||||||||||||.|||||||||||.||.||.|.||||||||||||.||.||||||||.||.||.|
Sbjct 1185  GCTGAAGGCCAAGCAGCTGACGCAGGATGATGACACGGACGAGGTTGAGATTGCCATTGACAACACAGCCTTCA  1258

Query   95  TGGACGAGTTCTTTTCTGAGATTGAGGAAACTCGGCTTAACATTGACAAGATCTCAGAACATGTAGAGGAGGCT  168
            |||||||||||||.||||||                                                      
Sbjct 1259  TGGACGAGTTCTTCTCTGAG------------------------------------------------------  1278

Query  169  AAGAAACTCTACAGTATCATTCTCTCTGCACCGATTCCAGAGCCAAAAACCAAGGATGACCTAGAGCAGCTCAC  242
                                                          |||||||.||||||||.||.||||||||
Sbjct 1279  ----------------------------------------------AAACCAAAGATGACCTTGAACAGCTCAC  1306

Query  243  GACTGAGATTAAGAAAAGGGCCAACAACGTCCGGAACAAACTGAAGAGCATGGAGAAGCATATTGAAGAAGATG  316
            .||||||||.|||||||||||||||||||||||||||||.||||||||||||||||||||.|||||.|||||||
Sbjct 1307  AACTGAGATCAAGAAAAGGGCCAACAACGTCCGGAACAAGCTGAAGAGCATGGAGAAGCACATTGAGGAAGATG  1380

Query  317  AGGTCAGGTCATCGGCAGACCTTCGGATTCGGAAATCCCAGCACTCTGTCCTTTCTCGGAAGTTTGTGGAGGTG  390
            ||||..|||||||.||||||||||||||.||.||.|||||||||||.|||||.||.||||||||||||||||||
Sbjct 1381  AGGTTCGGTCATCTGCAGACCTTCGGATACGAAAGTCCCAGCACTCCGTCCTCTCCCGGAAGTTTGTGGAGGTG  1454

Query  391  ATGACCAAATACAATGAAGCTCAAGTGGACTTCCGAGAACGCAGCAAAGGGCGAATCCAGCGGCAGCTCGAAAT  464
            |||||.||.||||||||.|||||.|||||||||||.|||||||||||||||||.|||||.||||||||.|||||
Sbjct 1455  ATGACAAAGTACAATGAGGCTCAGGTGGACTTCCGTGAACGCAGCAAAGGGCGCATCCAACGGCAGCTTGAAAT  1528

Query  465  TACTGGCAAAAAGACAACCGATGAGGAGCTGGAGGAGATGTTGGAGAGTGGCAACCCGGCCATCTTCACTTCTG  538
            |||||||||.||||||||.||||||||||||||.|||||||||||||||||||||||.||||||||||||||||
Sbjct 1529  TACTGGCAAGAAGACAACAGATGAGGAGCTGGAAGAGATGTTGGAGAGTGGCAACCCAGCCATCTTCACTTCTG  1602

Query  539  GGATCATTGACTCACAGATTTCCAAGCAAGCCCTCAGTGAGATTGAGGGACGACACAAGGACATTGTGAGGCTG  612
            |||||||||||||.|||||||||||||||||||||||.|||||||||||.||.|||||||||||.||.||||||
Sbjct 1603  GGATCATTGACTCCCAGATTTCCAAGCAAGCCCTCAGCGAGATTGAGGGTCGGCACAAGGACATCGTAAGGCTG  1676

Query  613  GAGAGCAGCATCAAGGAGCTTCACGACATGTTTATGGACATCGCCATGCTGGTGGAGAATCAGGGTGAGATGTT  686
            ||||||||||||||||||||.||.||||||||||||||||||||||||||||||||.||||||||.||||||||
Sbjct 1677  GAGAGCAGCATCAAGGAGCTCCATGACATGTTTATGGACATCGCCATGCTGGTGGAAAATCAGGGGGAGATGTT  1750

Query  687  AGATAACATAGAGTTGAATGTCATGCACACAGTGGACCACGTGGAGAAGGCACGAGATGAAACGAAAAAAGCTG  760
            |||||||||||||||||||||||||||||||||||||||.||||||||||||||.||||||||.||||.|||..
Sbjct 1751  AGATAACATAGAGTTGAATGTCATGCACACAGTGGACCATGTGGAGAAGGCACGGGATGAAACTAAAAGAGCCA  1824

Query  761  TGAAATACCAGAGTCAGGCCCGGAA---GAAATT---------------GATA---------ATTATCATTG-T  806
            ||||.||.|||.|||||||.|||||   ||..||               ||.|         |||.|..||| |
Sbjct 1825  TGAAGTATCAGGGTCAGGCTCGGAAGGTGAGGTTTTCCTTCTGTCTTCAGACAAGAGAGTCCATTTTGTTTGCT  1898

Query  807  GCTAG--------------------------TAGTTGTGTTG----------------CTGGG----------C  828
            ||| |                          |..||.|||||                |||||          |
Sbjct 1899  GCT-GCGCTTTCTCTCTCCTCTCTTTCTGTCTCTTTCTGTTGCCACCACATCTTGCATCTGGGGAAAGGGAGCC  1971

Query  829  AT--TTTA--GCATTGATTA----TTGGACTTTCCGT---TGGGCT-----GAAT-------------------  867
            ||  ||.|  |||||||..|    .|||||   |.||   ||||||     |||.                   
Sbjct 1972  ATGATTGACCGCATTGAGAACAACATGGAC---CAGTCAGTGGGCTTTGTGGAACGGGCTGTGGCAGATACCAA  2042

Query  868  --------------------------------------------------------------------------  867
                                                                                      
Sbjct 2043  AAAGGCGGTCAAGTATCAGAGTGAAGCCCGGAGGAAGAAGATCATGATCATGATCTGCTGTATTATCCTTGCCA  2116

Query  868  --------------------------------------------------------------------------  867
                                                                                      
Sbjct 2117  TCATCTTGGCTTCTACCATTGGGGGCATATTTGCCTGAAAAAGATGGGATCTCAACGGGCATCTGCAATCTTCC  2190

Query  868  --------------------------------------------------------------------------  867
                                                                                      
Sbjct 2191  ACCTCTGTGGTGCCATCATGTCTCCCCTCAGTCTTCCTCAGCTATGTCTCTTTTCACTAGGAAACTCACAACAC  2264

Query  868  --------------------------------------------------------------------------  867
                                                                                      
Sbjct 2265  AGGGCACCAATCAACTGTTTATTAAATGAACAAATTAATGAAAATGTAGAATTGAAAGAGATAGGGATGAAGGA  2338

Query  868  --------------------------------------------------------------------------  867
                                                                                      
Sbjct 2339  ACAGGGAGCACGGCAATATACAGTTGGTTTAGATGGCCCTTAAAGGTCTGGCCTGCATGGTAGAGAGACATAAC  2412

Query  868  --------------------------------------------------------------------------  867
                                                                                      
Sbjct 2413  GAACGGGTCCCTGTTTAGAGCACAACACACACACAGCCTGAAGGCCAGGATGGTGGTGAAGAGGCAGGCATTAC  2486

Query  868  --------------------------------------------------------------------------  867
                                                                                      
Sbjct 2487  AACATGCCCAACTCAACAGGGTCATACTGAACTCAGTGAGGCTGTCTCTCAGATCATGGTACTCCCTACTTTTA  2560

Query  868  --------------------------------------------------------------------------  867
                                                                                      
Sbjct 2561  CTCTAATGGCTCTTCTAGGTCGCATTCTTAACCAACCACATGTCTGCTTCCTCTTTCAGGGTCCAAGAATAGTT  2634

Query  868  --------------------------------------------------------------------------  867
                                                                                      
Sbjct 2635  TTTAATTCATAGATTGTTTAAGGATAGGCACTATGCCTATCTCGAATACTACCATGTCCCTTCTCTTAGCACAC  2708

Query  868  --------------------------------------------------------------------------  867
                                                                                      
Sbjct 2709  AGTGCCTGCCACTTTCAGATGTCTGCTTACTTATAGTCAAGCTTTGATTTCATTCATGGATGAGTCTTTGAGCT  2782

Query  868  --------------------------------------------------------------------------  867
                                                                                      
Sbjct 2783  TGGCTTTTAACTCTTTAAGGTACCATTGGGAACATGATTTTTTATTAATCAGAGGCACATAGAAAAATATGGCA  2856

Query  868  --------------------------------------------------------------------------  867
                                                                                      
Sbjct 2857  ACACCCCTATTACCATACCATACCTGTCACAGTGTTCTGTTTTGAGGGATGGTGCTTATGTAGAAGCTGGCTTT  2930

Query  868  --------------------------------------------------------------------------  867
                                                                                      
Sbjct 2931  GTATTGATGGTATAAATTTCTATTAGTACTCTCATTTGTCAGAGATGATAGTTGGTCTCAGGATGGAGGTTCAT  3004

Query  868  --------------------------------------------------------------------------  867
                                                                                      
Sbjct 3005  TCAATAAATTCATTCCTCCAACAAAAGAAAGAAGTTTATACTATGACCCAGCTCCCAAACAAGCACACCATGTT  3078

Query  868  --------------------------------------------------------------------------  867
                                                                                      
Sbjct 3079  ATCTGGAACAATGGAAGGAAGCCAAGGGGATAAAGTGGGACGAGGCTGCTGCTTCAGCCTCACCATGTCTGTGG  3152

Query  868  --------------------------------------------------------------------------  867
                                                                                      
Sbjct 3153  TAGAATAGGCTGCAGGTCAGTGAAATGTGCAAGAAACTGGTCCAAACACATTTCTAACTCAAGTGTCACTGTGT  3226

Query  868  --------------------------------------------------------------------------  867
                                                                                      
Sbjct 3227  TCCACTTTAAAAATAATTTACTTTGAGACTATTACATTTTACATTCATTAAAAATAAATGAAAATCTGCGTCTA  3300

Query  868  --------------------------------------------------------------------------  867
                                                                                      
Sbjct 3301  ACTTTTGAAAGTAAGTGTTAACTTACTTGAATGCTGGTTCCCCCAGAAAAACTGATTACTCTTGTTACGGACAA  3374

Query  868  --------------------------------------------------------------------------  867
                                                                                      
Sbjct 3375  ATGAAGCTGGCACCATGAAGTTTTGGATCACATGGGACCCTCAATTATCCAGCAGTGTGTGTGTGCTCTACATA  3448

Query  868  --------------------------------------------------------------------------  867
                                                                                      
Sbjct 3449  CACTAGCTCCTAAAGGGACAGAGAGCCAAGATGCCCCTCCTTAGCTAGCTTCAGATCTAGGAAGGGTTTCAACT  3522

Query  868  --------------------------------------------------------------------------  867
                                                                                      
Sbjct 3523  TTTGTTAAAGTTCTTTTGCTAAATTCCTTGTCATATTCCATGTTTTCCCTTCTGAGACTGACAGAAGATGGGCA  3596

Query  868  ----------------------------------  867
                                              
Sbjct 3597  GCTGGGCATTAATAAATATCTGTTGAACCCACTA  3630

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