Nucleotide Global Alignment

Description

• Query: TRCN0000474842
• Subject: XM_006517346.3
• Aligned Length: 1372
• Identities: 829
• Gaps: 446

Alignment

Query    1  ATGGATTCCTTCAAAGTAGTGCTGGAGGGGCCAGCACCTTGGGGCTTCCGGCTGCAAGGGGGCAAGGACTTCAA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  TGTGCCCCTCTCCATTTCCCGGCTCACTCCTGGGGGCAAAGCGGCGCAGGCCGGAGTGGCCGTGGGTGACTGGG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  TGCTGAGCATCGATGGCGAGAATGCGGGTAGCCTCACACACATCGAAGCTCAGAACAAGATCCGGGCCTGCGGG  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  GAGCGCCTCAGCCTGGGCCTCAGCAGGGCCCAGCCGGTTCAGAGCAAACCGCAGAAGGCCTCCGCCCCCGCCGC  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  GGACCCTCCGCGGTACACCTTTGCACCCAGCGTCTCCCTCAACAAGACGGCCCGGCCCTTTGGGGCGCCCCCGC  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  CCGCTGACAGCGCCCCGCAGCAGAATGGACAGCCGCTCCGACCGCTGGTCCCAGATGCCAGCAAGCAGCGGCTG  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  ATGGAGAACACAGAGGACTGGCGGCCGCGGCCGGGGACAGGCCAGTCGCGTTCCTTCCGCATCCTTGCCCACCT  518
            ||||||.|.||.||.||||||||||||||||||||||||||||||||.||.|||||||||||||||||||||||
Sbjct    1  ATGGAGGATACCGAAGACTGGCGGCCGCGGCCGGGGACAGGCCAGTCCCGCTCCTTCCGCATCCTTGCCCACCT  74

Query  519  CACAGGCACCGAGTTCATGCAAGACCCGGATGAGGAGCACCTGAAGAAATCAAGCCAGGTGCCCAGGACAGAAG  592
            |||.|||||.||||||||||||||||||||||||||...|.|||||||.|||||||||||||||||||||||||
Sbjct   75  CACGGGCACAGAGTTCATGCAAGACCCGGATGAGGAATTCATGAAGAAGTCAAGCCAGGTGCCCAGGACAGAAG  148

Query  593  CCCCAGCCCCAGCCTCATCTACACCCCAGGAGCCCTGGCCTGGCCCTACCGCCCCCAGCCCTACCAGCCGCCCG  666
            |||||||||||||||||.|||.|||||||||..|||||||||||||.|||.|.||||||||.|||||||||||.
Sbjct  149  CCCCAGCCCCAGCCTCAACTATACCCCAGGAATCCTGGCCTGGCCCCACCACTCCCAGCCCCACCAGCCGCCCA  222

Query  667  CCCTGGGCTGTGGACCCTGCGTTTGCCGAGCGCTATGCCCCGGACAAAACGAGCACAGTGCTGACCCGGCACAG  740
            ||||||||||||||.|||||.|||||.||||||||||||||.||||||||.|||||||||||||||||||||||
Sbjct  223  CCCTGGGCTGTGGATCCTGCATTTGCTGAGCGCTATGCCCCAGACAAAACCAGCACAGTGCTGACCCGGCACAG  296

Query  741  CCAGCCGGCCACGCCCACGCCGCTGCAGAGCCGCACCTCCATTGTGCAGGCAGCTGCCGGAGGGGTGC-CAGGA  813
            ||||||.|||||.||||||||.|||||||.||||||||||||.||||||||.||.||.||||||| || |||||
Sbjct  297  CCAGCCAGCCACACCCACGCCTCTGCAGAACCGCACCTCCATAGTGCAGGCCGCAGCTGGAGGGG-GCACAGGA  369

Query  814  GGGGGCAGCAACAACGGCAAGACTCCCGTGTGTCACCAGTGCCACAAGGTCATCCGGGGCCGCTACCTGGTGGC  887
            ||||||||||||||||||||||||||.||.||.|||||||||||||||.|||||||.||||||||||||||.||
Sbjct  370  GGGGGCAGCAACAACGGCAAGACTCCTGTATGCCACCAGTGCCACAAGATCATCCGCGGCCGCTACCTGGTAGC  443

Query  888  GCTGGGCCACGCGTACCACCCGGAGGAGTTTGTGTGTAGCCAGTGTGGGAAGGTCCTGGAAGAGGGTGGCTTCT  961
            .|||||||||||.|||||.||.||||||||||||||.|||||||||||.|||||||||||||||||||||||||
Sbjct  444  ACTGGGCCACGCATACCATCCCGAGGAGTTTGTGTGCAGCCAGTGTGGAAAGGTCCTGGAAGAGGGTGGCTTCT  517

Query  962  TTGAGGAGAAGGGCGCCATCTTCTGCCCACCATGCTATGACGTGCGCTATGCACCCAGCTGTGCCAAGTGCAAG  1035
            |.|||||||||||.||.|||||.|||||..|.||||||||.||||||||||||||||.|||||||||.||||||
Sbjct  518  TCGAGGAGAAGGGAGCTATCTTTTGCCCCTCCTGCTATGATGTGCGCTATGCACCCAACTGTGCCAAATGCAAG  591

Query 1036  AAGAAGATTACAGGCGAGATCATGCACGCCCTGAAGATGACCTGGCACGTGCACTGCTTTACCTGTGCTGCCTG  1109
            ||||||||.||.||.|||||||||||.||.||||||||||||||||||||.||.|||||.||||||||||||||
Sbjct  592  AAGAAGATCACTGGAGAGATCATGCATGCTCTGAAGATGACCTGGCACGTCCATTGCTTCACCTGTGCTGCCTG  665

Query 1110  CAAGACGCCCATCCGGAACAGGGCCTTCTACATGGAGGAGGGCGTGCCCTATTGCGAGCGAGACTATGAGAAGA  1183
            |||.|||||.||.||.|||||.|||||.||||||||.||.||.|..|||||.||||||||||||||||||||||
Sbjct  666  CAAAACGCCAATTCGCAACAGAGCCTTTTACATGGAAGAAGGGGCCCCCTACTGCGAGCGAGACTATGAGAAGA  739

Query 1184  TGTTTGGCACGAAATGCCATGGCTGTGACTTCAAGATCGACGCTGGGGACCGCTTCCTGGAGGCCCTGGGCTTC  1257
            ||||||||||.|||||.|..|||||||||||||||||.||.|||||.||||||||||||||.||.|||||||||
Sbjct  740  TGTTTGGCACAAAATGTCGAGGCTGTGACTTCAAGATTGATGCTGGAGACCGCTTCCTGGAAGCGCTGGGCTTC  813

Query 1258  AGCTGGCATGACACCTGCTTCGTCTGTGCGATATGTCAGATCAACCTGGAAGGAAAGACCTTCTACTCCAAGAA  1331
            ||||||||||||||.|||||.||.||.||.|||||||||||||||.||||||||||||||||||||||||||||
Sbjct  814  AGCTGGCATGACACATGCTTTGTTTGCGCAATATGTCAGATCAACTTGGAAGGAAAGACCTTCTACTCCAAGAA  887

Query 1332  GGACAGGCCTCTCTGCAAGAGCCATGCCTTCTCTCATGTG  1371
            |||||.|||.||||||||||||||.|||||||||||.||.
Sbjct  888  GGACAAGCCCCTCTGCAAGAGCCACGCCTTCTCTCACGTA  927