Nucleotide Global Alignment

Description

Query:
TRCN0000474851
Subject:
XM_006499422.1
Aligned Length:
2386
Identities:
2021
Gaps:
113

Alignment

Query    1  ATGCTTGCGGACCTCGGCTTAATCGGAACCATAGGCGAGGATGACGAGGTGCCGGTGGAGCCCGAGTCTGACTC  74
            |||||.|||||.||||||||.|||.|.|||||.||||||.||||||||||||||||.|||||||||||.|||||
Sbjct    1  ATGCTGGCGGAGCTCGGCTTCATCCGGACCATCGGCGAGAATGACGAGGTGCCGGTTGAGCCCGAGTCGGACTC  74

Query   75  CGGGGACGAGGAAGAGGAGGGGCCCATTGTGCTGGGCAGACGA-CAAAAAGCTTTGGGGAAGAACCGCAGTGCT  147
            |||.||||||||.||||||||.|||||||||||||||.| |.| ||.|||||.|||..||||||||||||||||
Sbjct   75  CGGAGACGAGGAGGAGGAGGGACCCATTGTGCTGGGCCG-CAAGCAGAAAGCCTTGCAGAAGAACCGCAGTGCT  147

Query  148  GATTTCAACCCTGATTTCGTTTTCACTGAGAAGGAGGGGACGTACGATGGCAGCTGGGCCCTGGCTGATGTCAT  221
            ||.|||||||||||.||.||||||||||||||||||||.|.|||.|||||||||||||||||||||||||||||
Sbjct  148  GACTTCAACCCTGACTTTGTTTTCACTGAGAAGGAGGGCATGTATGATGGCAGCTGGGCCCTGGCTGATGTCAT  221

Query  222  GAGCCAACTCAAGAAGAAGAGGGCAGCCACTACATTAGATGAGAAGATTGAGAAAGTTCGAAAGAAAAGGAAAA  295
            ||||||.||||||||||||.||||||||||||||.||||||||||||||||||||||.||.||||.||||||..
Sbjct  222  GAGCCAGCTCAAGAAGAAGCGGGCAGCCACTACACTAGATGAGAAGATTGAGAAAGTCCGGAAGAGAAGGAAGG  295

Query  296  CAGAGGATAAAGAAGCCAAGTCTGGGAAGTTGGAAAAGGAGAAAGAAGCAAAGGAAGGCTCTGAACCAAAGGAG  369
            |||||||.||.||||||||||||||||||.|||   ||||||||||||...|||.||.||||||.|..||||.|
Sbjct  296  CAGAGGACAAGGAAGCCAAGTCTGGGAAGGTGG---AGGAGAAAGAAGGCCAGGCAGACTCTGACCTGAAGGGG  366

Query  370  CAGGAAGACCTTCAAGAGAAT---------GATGAGGAAGGCTCAGAAGATGAAGCCTCGGAGACTGACTACTC  434
            |||            ||||||         |||||||.||||||..|.|||||||.|||.||||||||||||||
Sbjct  367  CAG------------GAGAATCCGGGTGAGGATGAGGCAGGCTCCAAGGATGAAGACTCTGAGACTGACTACTC  428

Query  435  ATCAGCTGATGAGAACATCCTCACCAAAGCAGATACACTCAAAGTAAAGGATCGGAAGAAGAAGAAGAA-----  503
            .||.|..||||||.|.|||||||||||||||||.|||||||||||.|||||...|||||||||||||||     
Sbjct  429  CTCTGAGGATGAGGAAATCCTCACCAAAGCAGACACACTCAAAGTGAAGGAGAAGAAGAAGAAGAAGAAGGGCC  502

Query  504  -------------------------GAAAGGA------------------------------------------  510
                                     |||||||                                          
Sbjct  503  AGGTGAGCCTGGGTCTGAGGTTGCTGAAAGGACATGCAGGCTTGCTTGCTTTGCTGAGTTCTTTCCTGTCGTCT  576

Query  511  ---------CAGGAAGCAGGAGGATTTTTTGAAGATGCATCTCAGTACGATGAAAACCTCTCGTTCCAGGACAT  575
                     ||||.||||||||||||.||||||||||||||..||||.||..|||.|||.||.|||||||||||
Sbjct  577  GATCTGTTGCAGGCAGCAGGAGGATTCTTTGAAGATGCATCCGAGTATGACAAAAGCCTGTCCTTCCAGGACAT  650

Query  576  GAACCTTTCCCGCCCTCTTCTGAAGGCCATTACAGCCATGGGCTTCAAGCAGCCCACCCCGATCCAGAAGGCGT  649
            ||||||.|||||.||.||.||||||||||||||||||||||||||||||||||||||.||.|||||||||||||
Sbjct  651  GAACCTCTCCCGGCCCCTCCTGAAGGCCATTACAGCCATGGGCTTCAAGCAGCCCACGCCAATCCAGAAGGCGT  724

Query  650  GCATACCTGTGGGTCTATTGGGGAAGGACATCTGTGCCTGTGCAGCCACTGGGACAGGTAAAACTGCCGCCTTT  723
            |.||.|||||||||||..||||||||||||||||.|||||||||||||||||||||||.||||||||.||||||
Sbjct  725  GTATCCCTGTGGGTCTGCTGGGGAAGGACATCTGCGCCTGTGCAGCCACTGGGACAGGCAAAACTGCAGCCTTT  798

Query  724  GCCCTGCCTGTTTTGGAGCGTCTGATTTATAAACCCCGCCAGGCTCCAGTCACCCGCGTGCTGGTGCTAGTGCC  797
            ||.|||||.||.||||||||||||||.||.||.||||||||||||.|||||||.||||||||||||||.||.||
Sbjct  799  GCACTGCCCGTCTTGGAGCGTCTGATCTACAAGCCCCGCCAGGCTGCAGTCACTCGCGTGCTGGTGCTGGTCCC  872

Query  798  CACCCGAGAGCTGGGCATCCAGGTGCACTCTGTCACCAGACAGCTGGCCCAGTTCTGCAACATCACCACCTGCC  871
            |||..||||||||||||||||.||||||||||||||||..|||||||||||||||||||.||||||.|||||||
Sbjct  873  CACGAGAGAGCTGGGCATCCAAGTGCACTCTGTCACCAAGCAGCTGGCCCAGTTCTGCAGCATCACTACCTGCC  946

Query  872  TGGCTGTGGGCGGCTTGGATGTGAAGTCTCAGGAAGCAGCTCTTCGGGCAGCGCCTGACATCCTCATCGCCACC  945
            ||||||||||.|||.||||||||||||||||||||||.||||||||||||||.||.|||||||||||.|||||.
Sbjct  947  TGGCTGTGGGTGGCCTGGATGTGAAGTCTCAGGAAGCCGCTCTTCGGGCAGCACCAGACATCCTCATTGCCACA  1020

Query  946  CCAGGCCGGCTCATCGATCACCTCCACAACTGCCCTTCCTTCCACCTGAGCAGCATCGAGGTGCTCATCCTGGA  1019
            ||.||||||||||||||.||||||||.||||||||.||||||||||||||||||||.||.|||||||||.||||
Sbjct 1021  CCTGGCCGGCTCATCGACCACCTCCATAACTGCCCCTCCTTCCACCTGAGCAGCATTGAAGTGCTCATCTTGGA  1094

Query 1020  CGAGGCTGACAGGATGCTGGATGAGTACTTTGAGGAGCAGATGAAGGAGATCATCCGAATGTGTTCCCACCACC  1093
            .||||||||||||||||||||||||||.||.||||||||||||||||||||.||||||||||||||||||||||
Sbjct 1095  TGAGGCTGACAGGATGCTGGATGAGTATTTCGAGGAGCAGATGAAGGAGATTATCCGAATGTGTTCCCACCACC  1168

Query 1094  GCCAGACCATGCTCTTCTCGGCCACCATGACAGACGAGGTGAAAGATCTGGCTTCTGTCTCCTTGAAGAATCCT  1167
            ||||||||||||||||||||||||||||||||||.||||||||||||||||||||.||||||||.|||||||||
Sbjct 1169  GCCAGACCATGCTCTTCTCGGCCACCATGACAGATGAGGTGAAAGATCTGGCTTCGGTCTCCTTAAAGAATCCT  1242

Query 1168  GTCCGGATATTTGTGAACAGCAACACAGATGTGGCTCCCTTTCTGCGGCAGGAGTTCATCCGGATCCGGCCTAA  1241
            ||.|||||||||||||||||||||||||||||.||||||||.||||||||.||||||||.||||||||||||||
Sbjct 1243  GTGCGGATATTTGTGAACAGCAACACAGATGTCGCTCCCTTCCTGCGGCAAGAGTTCATACGGATCCGGCCTAA  1316

Query 1242  TCGTGAAGGAGACCGGGAAGCCATCGTGGCAGCTTTGTTGACGAGGACCTTCACTGACCATGTGATGCTGTTCA  1315
            |.|.|||||.||||||||.|||||.|||||||||.||.|||.|||.||||||||||||||.||||||||.||||
Sbjct 1317  TAGGGAAGGGGACCGGGAGGCCATTGTGGCAGCTCTGCTGATGAGAACCTTCACTGACCACGTGATGCTCTTCA  1390

Query 1316  CGCAAACCAAGAAGCAGGCCCACCGCATGCACATCCTCCTGGGGCTCATGGGGCTGCAGGTGGGTGAGCTCCAT  1389
            |.||.|||||||||||||||||.|||||||||||||||||||||||..||||||||||||||||.||||||||.
Sbjct 1391  CCCAGACCAAGAAGCAGGCCCATCGCATGCACATCCTCCTGGGGCTGCTGGGGCTGCAGGTGGGCGAGCTCCAC  1464

Query 1390  GGCAACTTGTCACAGACGCAGCGGCTGGAGGCCCTCCGGCGTTTTAAGGATGAACAGATTGACATCCTCGTGGC  1463
            |||||||||||||||||.|||||.|||||||||||||||||.||||||||.|||||||||||||||||.|||||
Sbjct 1465  GGCAACTTGTCACAGACCCAGCGCCTGGAGGCCCTCCGGCGCTTTAAGGACGAACAGATTGACATCCTGGTGGC  1538

Query 1464  CACTGATGTGGCAGCCCGTGGACTTGACATTGAGGGGGTCAAAACGGTAATCAACTTCACAATGCCTAATACCA  1537
            |||.||||||||||||||.||.|||||||||||.||.||.|||||.||.|||||||||||.|||||.||.||..
Sbjct 1539  CACAGATGTGGCAGCCCGCGGTCTTGACATTGAAGGAGTGAAAACAGTGATCAACTTCACCATGCCCAACACTG  1612

Query 1538  TCAAACATTATGTCCACCGGGTGGGGCGAACAGCACGTGCTGGCAGGGCTGGGCGCTCAGTCTCTCTGGTGGGA  1611
            |.|||||.|||||.||||||||||||||.||.||.|||||||||||||||||.|||||.|||||.||.||||||
Sbjct 1613  TTAAACACTATGTGCACCGGGTGGGGCGGACGGCCCGTGCTGGCAGGGCTGGACGCTCTGTCTCCCTAGTGGGA  1686

Query 1612  GAAGATGAGCGGAAGATGCTGAAGGAGATTGTAAAAGCTGCCAAGGCCCCTGTGAAGGCCAGGATACTTCCCCA  1685
            ||.||.|||||||||||||||||||||||.||.||.|||||||||||.||.||||||||..||||.||||||||
Sbjct 1687  GAGGAGGAGCGGAAGATGCTGAAGGAGATCGTGAAGGCTGCCAAGGCGCCAGTGAAGGCTCGGATCCTTCCCCA  1760

Query 1686  AGATGTCATCCTCAAATTCCGGGACAAGATTGAGAAAATGGAGAAAGATGTGTATGCAGTTCTGCAGCTAGAGG  1759
            .|||||.||||||||.|||||||||||||||||||||.||||||||||||||||||||||.||||||||.||||
Sbjct 1761  GGATGTTATCCTCAAGTTCCGGGACAAGATTGAGAAATTGGAGAAAGATGTGTATGCAGTGCTGCAGCTGGAGG  1834

Query 1760  CGGAGGAAAAAGAGATGCAGCAGTCAGAAGCCCAGATCAATACAGCAAAGCGGCTCCTGGAGAAGGGGAAGGAG  1833
            |||||||||||||||||||||||||.|||||||||||..|.||||||.||||.|||.|.|..||.|||||.|||
Sbjct 1835  CGGAGGAAAAAGAGATGCAGCAGTCGGAAGCCCAGATTGACACAGCACAGCGACTCTTAGCCAAAGGGAAAGAG  1908

Query 1834  GCAGTGGTCCAAGAGCCCGAGAGGAGCTGGTTCCAGACCAAAGAAGAGAGGAAGAAGGAGAAAATTGCCAAAGC  1907
            .|||..|.|||.|||||.||||||||||||||||||||||||||||||||||||||||||||.|||||.||.||
Sbjct 1909  ACAGCAGACCAGGAGCCTGAGAGGAGCTGGTTCCAGACCAAAGAAGAGAGGAAGAAGGAGAAGATTGCTAAGGC  1982

Query 1908  TCTGCAGGAATTTGACTTGGCCTTAAGAGGAAAGAAGAAAAGGAAGAAGTTTATGAAGGATGCCAAAAAAAAGG  1981
            |||.|||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||
Sbjct 1983  TCTACAGGAGTTTGACTTGGCCTTAAGAGGAAAGAAGAAAAGGAAGAAGTTTATGAAGGATGCCAAGAAAAAGG  2056

Query 1982  GGGAGATGACAGCAGAGGAAAGGTCTCAGTTTGAAATCCTCAAGGCGCAGATGTTTGCTGAACGGCTAGCGAAG  2055
            ||||||||||.||||||||.|||||.||||||||||||||||||||.|||||||||||.||.|||||.||.|||
Sbjct 2057  GGGAGATGACGGCAGAGGAGAGGTCCCAGTTTGAAATCCTCAAGGCACAGATGTTTGCAGAGCGGCTGGCCAAG  2130

Query 2056  AGGAATCGCAGAGCCAAGCGGGCCCGAGCAATGCCCGAGGAGGAGCCAGTGAGAGGTCCTGCCAAGAAGCAAAA  2129
            ||||||||||||.|||||||.||.||.||||||||.|||||.|||||   .|.|||.|||||.||.|||||.||
Sbjct 2131  AGGAATCGCAGAACCAAGCGAGCACGGGCAATGCCTGAGGACGAGCC---TACAGGCCCTGCTAAAAAGCAGAA  2201

Query 2130  GCAGGGGAAGAAATCTGTATTTGATGAAGAACTCACCAACACAAGCAAGAAGGCCCTGAAACAGTATCGAGCTA  2203
            ||||..|.||||.|||||.||||||||||||||||||||||||||||||||||||||||||||||||||.|||.
Sbjct 2202  GCAGCAGCAGAAGTCTGTGTTTGATGAAGAACTCACCAACACAAGCAAGAAGGCCCTGAAACAGTATCGGGCTG  2275

Query 2204  GCCCTTCCTTTGAAGAAAGGAAACAGTTGGGCTTGCCCCACCAGAGACGAGGAGGAAACTTTAAATCTAAATCC  2277
            ||||||||||||||||.||||||||||..||..||||||.||||||  || ||||.|||||.||||||||.|||
Sbjct 2276  GCCCTTCCTTTGAAGAGAGGAAACAGTCAGGTCTGCCCCGCCAGAG--GA-GAGGGAACTTCAAATCTAAGTCC  2346

Query 2278  AGATACAAGAGGAGGAAG  2295
            ||.||||||||.|.||||
Sbjct 2347  AGGTACAAGAGAAAGAAG  2364

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