Nucleotide Global Alignment
Description
- Query:
- TRCN0000474959
- Subject:
- XM_006513588.3
- Aligned Length:
- 2313
- Identities:
- 1278
- Gaps:
- 798
Alignment
Query 1 ATGTACCCCCAGGGAAGGCACCCGACCCCGCTCCAGTCCGGCCAGCCCTTCAAGTTCTCGATCTTGGAGATCTG 74
||||||||.|||||||||||||||||||||||.|||||.||||||||.|||||||||||..|..||||.|||||
Sbjct 1 ATGTACCCTCAGGGAAGGCACCCGACCCCGCTGCAGTCTGGCCAGCCTTTCAAGTTCTCAGTACTGGAAATCTG 74
Query 75 CGACCGCATCAAAGAAGAATTCCAGTTTCTTCAGGCTCAATACCACAGCCTCAAGCTAGAATGTGAGAAGCTGG 148
.|||||.||||||||.|||||||||||||||||.|||||.||||||||||||||||||||||||||||||||||
Sbjct 75 TGACCGGATCAAAGAGGAATTCCAGTTTCTTCAAGCTCAGTACCACAGCCTCAAGCTAGAATGTGAGAAGCTGG 148
Query 149 CCAGCGAGAAGACGGAAATGCAGCGACATTATGTCAT------------------------------------- 185
|||||||||||||.||||||||..|.||||||||.||
Sbjct 149 CCAGCGAGAAGACAGAAATGCAAAGGCATTATGTGATGGCTGCACCCCATCAGTGTCCCCAGGGTGGCACCAGC 222
Query 186 --------------------------------GTATTATGAGATGTCGTACGGGCTCAACATTGAAATGCATAA 227
|||.||.||||||||.|||||.|||||||||||.||||||||
Sbjct 223 TATCCACACTGGCCAAGACTGTCTCCTTTGCAGTACTACGAGATGTCCTACGGACTCAACATTGAGATGCATAA 296
Query 228 GCAGGCGGAGATTGTGAAGCGTCTGAGCGGTATCTGCGCTCAGATTATCCCCTTCCTGACCCAGGAGCATCAGC 301
.|||||.|||||||||||.||.||.||.|..|||||.||.|||||..||||.|||||.||.|||||||||||||
Sbjct 297 ACAGGCTGAGATTGTGAAACGCCTCAGTGCGATCTGTGCCCAGATGGTCCCGTTCCTCACTCAGGAGCATCAGC 370
Query 302 AGCAGGTGCTCCAGGCCGTAGAACGCGCCAAGCAGGTCACCGTGGGGGAGCTGAACAGCCTCATCGGGCAG--- 372
||||||||||||||||.||.||.||.|||||||||||.|||||||||||.||||||||||||.|.||||||
Sbjct 371 AGCAGGTGCTCCAGGCTGTGGACCGAGCCAAGCAGGTGACCGTGGGGGAACTGAACAGCCTCCTGGGGCAGCAG 444
Query 373 ---CAGCTCCAGCCGCTGTCCCACCACGCACCCCCTGTGCCCCTCACCCCCCGCCCAGCCGGGCTGGTGGGCGG 443
||||||||||||||||| ||||||||||||.|||||.||||||||.|||||||||||.||||||||.|.
Sbjct 445 AATCAGCTCCAGCCGCTGTC---CCACGCACCCCCCGTGCCTCTCACCCCGCGCCCAGCCGGCCTGGTGGGTGC 515
Query 444 CAGTGCTACGGGGCTGCTTGCTCTGTCTGGAGCCCTGGCTGCCCAGGCTCAGCTGGCGGCGGCTGTCAAGGAGG 517
|.|.||.||.||||||||.||.||.|||||.||.||||||||.|||||.|||||||.|||.||.||.|||||.|
Sbjct 516 CGGGGCCACTGGGCTGCTGGCCCTATCTGGGGCACTGGCTGCGCAGGCCCAGCTGGTGGCTGCCGTAAAGGAAG 589
Query 518 ACCGTGCGGGCGTGGAGGCCGAGGGGTCCAGAGTGGAGAGAGCCCCGAGCAGGAGTGCATCTCCCTCGCCCCCT 591
||||||.|||.|||||.||||||||||||||||||||.|||||..|.|||||||||.|.||.||.||.||||||
Sbjct 590 ACCGTGTGGGTGTGGACGCCGAGGGGTCCAGAGTGGACAGAGCTGCCAGCAGGAGTTCTTCCCCGTCTCCCCCT 663
Query 592 GAGAGTCTCGTGGAGGAGGAGCGACCGAGTGGCCCTGGTGGTGGCGGGA---AGCAGAGAGCAGATGAGAAGGA 662
||||||||.|||||.|||||.|..||.||..|||..||.||..|.|||| ||||||||||.||.||.|||||
Sbjct 664 GAGAGTCTGGTGGAAGAGGACCATCCCAGCAGCCGAGGCGGCAGTGGGAAACAGCAGAGAGCTGAAGACAAGGA 737
Query 663 GCCATCAGGACCTTATGAAAGCGACGAAGACAAGAGTGATTACAATCTGGTGGTGGACGAGGACCAACCCTCAG 736
.|..|||||.||||||||.||.||.||||||||||||||.||.||.|||||.|||||.|||||||||||.||||
Sbjct 738 TCTGTCAGGGCCTTATGACAGTGAGGAAGACAAGAGTGACTATAACCTGGTAGTGGATGAGGACCAACCGTCAG 811
Query 737 AGCCCCCCAGCCCGGCTACCACCCCCTGCGGAAAGGTACCCATCTGCATTCCTGCCCGTCGGGACCTGGTGGAC 810
|||||||||||||.|..||||||||.||.||.||||..|||.||||||||||||||||..|||||||....|||
Sbjct 812 AGCCCCCCAGCCCTGTGACCACCCCTTGTGGGAAGGCGCCCCTCTGCATTCCTGCCCGCAGGGACCTCACAGAC 885
Query 811 AGTCCAGCCTCCTTGGCCTCTAGCCTTGGCTCACCGCTGCCTAGAGCCAAGGAGCTCAT---CCTGAATGACCT 881
||||||||||||||||||||.||..|.||||||||.||.||.|||..|||.|| ||| ||||||.||.||
Sbjct 886 AGTCCAGCCTCCTTGGCCTCCAGTTTGGGCTCACCACTCCCCAGAAGCAAAGA---CATAGCCCTGAACGATCT 956
Query 882 TCCCGCCAGCACTCCTGCCTCCAAATCCTGTGACTCCTCCCCGCCCCAGGACGCTTCCACCCCCGGGCCCAGCT 955
||||.|..|||||||||||||||..||.||||...||||.||.|||||||||.|.||||||||.||||||||||
Sbjct 957 TCCCACAGGCACTCCTGCCTCCAGGTCATGTGGTACCTCTCCACCCCAGGACTCGTCCACCCCGGGGCCCAGCT 1030
Query 956 CGGCCAGTCACCTCTGCCAGCTTGCTGCCAAGCCAGCACCTTCCACGGACAGCGTCGCCCTGAGGAGCCCCCTG 1029
|.||||||||||||||||||||.||.||..||||.|||.|..||||.||||||.|||||||||||||.||||||
Sbjct 1031 CAGCCAGTCACCTCTGCCAGCTGGCGGCTCAGCCGGCAGCACCCACAGACAGCATCGCCCTGAGGAGTCCCCTG 1104
Query 1030 ACTCTGTCCAGTCCCTTCACCACGTCCTTCAGCCTGGGCTCCCACAGCACTCTCAACGGAGACCTCTCCGTGCC 1103
||..|||||||.||.||||||.|.||||||||||||||||||||||||||.|||||.||.|||||||||.||||
Sbjct 1105 ACCTTGTCCAGCCCTTTCACCTCATCCTTCAGCCTGGGCTCCCACAGCACCCTCAATGGGGACCTCTCCATGCC 1178
Query 1104 CAGCTCCTACGTCAGCCTCCACCTGTCCCCCCAGGTCAGCAGCTCTGTGGTGTACGGACGCTCCCCCGT---GA 1174
..|||||||.|||.||||||||||||||||||||||||||||||||||.|||||.||||||||.||..| ||
Sbjct 1179 TGGCTCCTATGTCGGCCTCCACCTGTCCCCCCAGGTCAGCAGCTCTGTCGTGTATGGACGCTCACCTCTGCAGA 1252
Query 1175 TGGCATTTGAGTCTCATCCCCATCTCCGAGGGTCATCCGTCTCTTCCTCCCTACCCAGCATCCCTGGGGGAAAG 1248
||||||||||.||.||.||||||||||||||.||.||.|| ||||.|.||..|||||||||.||..|||
Sbjct 1253 TGGCATTTGAATCGCACCCCCATCTCCGAGGCTCGTCTGT------CTCCTTGCCTGGCATCCCTGTGGCTAAG 1320
Query 1249 CCGGCCTACTCCTTCCACGTGTCTGCGGACGGGCAGATGCAGCCGGTTCCCTTCCCCTCGGATGCACTGGTAGG 1322
|||||.|||||||||||||||||||||||.||.|||||||||||.||.||||||||.||.|||||.||||||||
Sbjct 1321 CCGGCTTACTCCTTCCACGTGTCTGCGGATGGCCAGATGCAGCCTGTGCCCTTCCCGTCTGATGCTCTGGTAGG 1394
Query 1323 CGCGGGCATCCCGCGGCACGCCCGGCAGCTGCACACGCTGGCCCATGGCGAGGTGGTCTGCGCGGTCACCATCA 1396
|.|.||||||||.||.|||||..|||||||.||||||||||||||.||.||||||||.||.||.||||||||||
Sbjct 1395 CACAGGCATCCCTCGCCACGCAAGGCAGCTACACACGCTGGCCCACGGTGAGGTGGTGTGTGCCGTCACCATCA 1468
Query 1397 GCGGCTCCACACAGCATGTGTACACGGGCGGCAAGGGCTGTGTGAAGGTGTGGGACGTGGGCCAGCCTGGGGCC 1470
||.|||||||||||||.||||||||.||||||||.||.||.||||||||||||||||||||||||||.||...|
Sbjct 1469 GCAGCTCCACACAGCACGTGTACACAGGCGGCAAAGGATGCGTGAAGGTGTGGGACGTGGGCCAGCCGGGTAGC 1542
Query 1471 AAGACGCCCGTGGCCCAGCTCGACTGCCTGAACCGAGACAACTACATTCGTTCCTGCAAGTTGCTGCCGGATGG 1544
|||||.||.|||||.|||||.||.|||||
Sbjct 1543 AAGACCCCTGTGGCACAGCTGGATTGCCT--------------------------------------------- 1571
Query 1545 CCGGAGTCTGATCGTGGGCGGTGAGGCCAGCACCTTGTCCATTTGGGACCTGGCGGCGCCCACCCCCCGTATCA 1618
||.|||||.||.||.||||
Sbjct 1572 -------------------------------------------------------GCACCCACACCACGGATCA 1590
Query 1619 AGGCCGAGCTGACTTCCTCAGCCCCAGCCTGCTACGCCCTGGCCGTCAGCCCCGACGCCAAGGTTTGCTTCTCC 1692
|.||.||||
Sbjct 1591 AAGCAGAGC----------------------------------------------------------------- 1599
Query 1693 TGCTGCAGCGATGGCAACATTGTGGTCTGGGACCTGCAGAATCAGACTATGGTCAGGCAGTTCCAGGGCCACAC 1766
Sbjct 1600 -------------------------------------------------------------------------- 1599
Query 1767 GGACGGCGCCAGCTGCATTGATATTTCCGATTACGGCACTCGGCTCTGGACAGGGGGCCTGGACAACACGGTGC 1840
Sbjct 1600 -------------------------------------------------------------------------- 1599
Query 1841 GCTGCTGGGACCTGCGGGAGGGCCGCCAGCTGCAGCAGCATGACTTCAGCTCCCAGATTTTCTCCCTGGGCCAC 1914
Sbjct 1600 -------------------------------------------------------------------------- 1599
Query 1915 TGCCCTAACCAGGACTGGCTGGCGGTCGGAATGGAGAGTAGCAACGTGGAGATCCTGCACGTCCGCAAGCCGGA 1988
Sbjct 1600 -------------------------------------------------------------------------- 1599
Query 1989 GAAATACCAGCTGCACCTCCACGAGAGCTGCGTGCTGTCCCTGAAGTTTGCCTCCTGCGGACGGTGGTTTGTGA 2062
Sbjct 1600 -------------------------------------------------------------------------- 1599
Query 2063 GCACCGGGAAGGACAACCTGCTCAACGCCTGGAGGACGCCGTACGGGGCCAGCATTTTCCAGTCCAAGGAGTCG 2136
Sbjct 1600 -------------------------------------------------------------------------- 1599
Query 2137 TCCTCAGTCCTGAGTTGTGACATCTCCAGAAATAACAAATACATCGTGACAGGCTCGGGGGACAAGAAGGCCAC 2210
Sbjct 1600 -------------------------------------------------------------------------- 1599
Query 2211 CGTGTATGAGGTGGTCTAC 2229
Sbjct 1600 ------------------- 1599
