Nucleotide Global Alignment

Description

Query:
TRCN0000474970
Subject:
XR_950810.2
Aligned Length:
3594
Identities:
2643
Gaps:
951

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GGGAGCCACCGCCGCGCCGCCGTTTGGGCCGGGAAGCGATGTAGTAGCTGCCAGGCTGTCCCCCGCCCTGCCCG  74

Query    1  ------------------------------------ATGAAGAAGCAGTTCAACCGCATGAAGCAGCTGGCTAA  38
                                                ||||||||||||||||||||||||||||||||||||||
Sbjct   75  GCCCGAGCCCCGCGGGCCGCCGCCGCCACCGCCGCCATGAAGAAGCAGTTCAACCGCATGAAGCAGCTGGCTAA  148

Query   39  CCAGACCGTGGGCAGAGCTGAGAAAACAGAAGTCCTTAGTGAAGATCTATTACAGATTGAGAGACGCCTGGACA  112
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  CCAGACCGTGGGCAGAGCTGAGAAAACAGAAGTCCTTAGTGAAGATCTATTACAGATTGAGAGACGCCTGGACA  222

Query  113  CGGTGCGGTCAATATGCCACCATTCCCATAAGCGCTTGGTGGCATGTTTCCAGGGCCAGCATGGCACCGATGCC  186
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CGGTGCGGTCAATATGCCACCATTCCCATAAGCGCTTGGTGGCATGTTTCCAGGGCCAGCATGGCACCGATGCC  296

Query  187  GAGAGGAGACACAAAAAACTGCCTCTGACAGCTCTTGCTCAAAATATGCAAGAAGCATCGACTCAGCTGGAAGA  260
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GAGAGGAGACACAAAAAACTGCCTCTGACAGCTCTTGCTCAAAATATGCAAGAAGCATCGACTCAGCTGGAAGA  370

Query  261  CTCTCTCCTGGGGAAGATGCTGGAGACGTGTGGAGATGCTGAGAATCAGCTGGCTCTCGAGCTCTCCCAGCACG  334
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  CTCTCTCCTGGGGAAGATGCTGGAGACGTGTGGAGATGCTGAGAATCAGCTGGCTCTCGAGCTCTCCCAGCACG  444

Query  335  AAGTCTTTGTTGAGAAGGAGATCGTGGACCCTCTGTACGGCATAGCTGAGGTGGAGATTCCCAACATCCAGAAG  408
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  AAGTCTTTGTTGAGAAGGAGATCGTGGACCCTCTGTACGGCATAGCTGAGGTGGAGATTCCCAACATCCAGAAG  518

Query  409  CAGAGGAAGCAGCTTGCAAGATTGGTGTTAGACTGGGATTCAGTCAGAGCCAGGTGGAACCAAGCTCACAAATC  482
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CAGAGGAAGCAGCTTGCAAGATTGGTGTTAGACTGGGATTCAGTCAGAGCCAGGTGGAACCAAGCTCACAAATC  592

Query  483  CTCAGGAACCAACTTTCAGGGGCTTCCATCAAAAATAGATACTCTAAAGGAAGAGATGGATGAAGCTGGAAATA  556
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CTCAGGAACCAACTTTCAGGGGCTTCCATCAAAAATAGATACTCTAAAGGAAGAGATGGATGAAGCTGGAAATA  666

Query  557  AAGTAGAACAGTGCAAGGATCAACTTGCAGCAGACATGTACAACTTTATGGCCAAAGAAGGGGAGTATGGCAAA  630
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  AAGTAGAACAGTGCAAGGATCAACTTGCAGCAGACATGTACAACTTTATGGCCAAAGAAGGGGAGTATGGCAAA  740

Query  631  TTCTTTGTTACGTTATTAGAAGCCCAAGCAGATTACCATAGAAAAGCATTAGCAGTCTTAGAAAAGACCCTCCC  704
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  TTCTTTGTTACGTTATTAGAAGCCCAAGCAGATTACCATAGAAAAGCATTAGCAGTCTTAGAAAAGACCCTCCC  814

Query  705  CGAAATGCGAGCCCATCAAGATAAGTGGGCGGAAAAACCAGCCTTTGGGACTCCCCTAGAAGAACACCTGAAGA  778
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  CGAAATGCGAGCCCATCAAGATAAGTGGGCGGAAAAACCAGCCTTTGGGACTCCCCTAGAAGAACACCTGAAGA  888

Query  779  GGAGCGGGCGCGAGATTGCGCTGCCCATTGAAGCCTGTGTCATGCTGCTTCTGGAGACAGGCATGAAGGAGGAG  852
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  GGAGCGGGCGCGAGATTGCGCTGCCCATTGAAGCCTGTGTCATGCTGCTTCTGGAGACAGGCATGAAGGAGGAG  962

Query  853  GGCCTTTTCCGAATTGGGGCTGGGGCCTCCAAGTTAAAGAAGCTGAAAGCTGCTTTGGACTGTTCTACTTCTCA  926
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  GGCCTTTTCCGAATTGGGGCTGGGGCCTCCAAGTTAAAGAAGCTGAAAGCTGCTTTGGACTGTTCTACTTCTCA  1036

Query  927  CCTGGATGAGTTCTATTCAGACCCCCATGCTGTAGCAGGTGCTTTAAAATCCTATTTACGGGAATTGCCTGAAC  1000
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  CCTGGATGAGTTCTATTCAGACCCCCATGCTGTAGCAGGTGCTTTAAAATCCTATTTACGGGAATTGCCTGAAC  1110

Query 1001  CTTTGATGACTTTTAATCTGTATGAAGAATGGACACAAGTTGCAAGTGTGCAGGATCAAGACAAAAAACTTCAA  1074
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  CTTTGATGACTTTTAATCTGTATGAAGAATGGACACAAGTTGCAAGTGTGCAGGATCAAGACAAAAAACTTCAA  1184

Query 1075  GACTTGTGGAGAACATGTCAGAAGTTGCCACCACAAAATTTTGTTAACTTTAGATATTTGATCAAGTTCCTTGC  1148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  GACTTGTGGAGAACATGTCAGAAGTTGCCACCACAAAATTTTGTTAACTTTAGATATTTGATCAAGTTCCTTGC  1258

Query 1149  AAAGCTTGCTCAGACCAGCGATGTGAATAAAATGACTCCCAGCAACATTGCGATTGTGTTAGGCCCTAACTTGT  1222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  AAAGCTTGCTCAGACCAGCGATGTGAATAAAATGACTCCCAGCAACATTGCGATTGTGTTAGGCCCTAACTTGT  1332

Query 1223  TATGGGCCAGAAATGAAGGAACACTTGCTGAAATGGCAGCAGCCACATCCGTCCATGTGGTTGCAGTGATTGAA  1296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  TATGGGCCAGAAATGAAGGAACACTTGCTGAAATGGCAGCAGCCACATCCGTCCATGTGGTTGCAGTGATTGAA  1406

Query 1297  CCCATCATTCAGCATGCCGACTGGTTCTTCCCTGAAGAGGTGGAATTTAATGTATCAGAAGCATTTGTACCTCT  1370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  CCCATCATTCAGCATGCCGACTGGTTCTTCCCTGAAGAGGTGGAATTTAATGTATCAGAAGCATTTGTACCTCT  1480

Query 1371  CACCACCCCGAGTTCTAATCACTCATTCCACACTGGAAACGACTCTGACTCGGGGACCCTGGAGAGGAAGCGGC  1444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  CACCACCCCGAGTTCTAATCACTCATTCCACACTGGAAACGACTCTGACTCGGGGACCCTGGAGAGGAAGCGGC  1554

Query 1445  CTGCTAGCATGGCGGTGATGGAAGGAGACTTGGTGAAGAAGGAAAGCTTTGGTGTGAAGCTTATGGACTTCCAG  1518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  CTGCTAGCATGGCGGTGATGGAAGGAGACTTGGTGAAGAAGGAAAGCTTTGGTGTGAAGCTTATGGACTTCCAG  1628

Query 1519  GCCCACCGGCGGGGTGGCACTCTAAATAGAAAGCACATATCCCCCGCTTTCCAGCCGCCACTTCCGCCCACAGA  1592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  GCCCACCGGCGGGGTGGCACTCTAAATAGAAAGCACATATCCCCCGCTTTCCAGCCGCCACTTCCGCCCACAGA  1702

Query 1593  TGGCAGCACCGTGGTGCCCGCTGGCCCAGAGCCCCCTCCCCAGAGCTCTAGGGCTGAAAGCAGCTCTGGGGGTG  1666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  TGGCAGCACCGTGGTGCCCGCTGGCCCAGAGCCCCCTCCCCAGAGCTCTAGGGCTGAAAGCAGCTCTGGGGGTG  1776

Query 1667  GGACTGTCCCCTCTTCCGCGGGCATACTGGAGCAGGGGCCGAGCCCAGGCGACGGCAGTCCTCCCAAACCGAAG  1740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  GGACTGTCCCCTCTTCCGCGGGCATACTGGAGCAGGGGCCGAGCCCAGGCGACGGCAGTCCTCCCAAACCGAAG  1850

Query 1741  GACCCTGTATCTGCAGCTGTGCCAGCACCAGGGAGAAACAACAGTCAGATAGCATCTGGCCAAAATCAGCCCCA  1814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851  GACCCTGTATCTGCAGCTGTGCCAGCACCAGGGAGAAACAACAGTCAGATAGCATCTGGCCAAAATCAGCCCCA  1924

Query 1815  GGCAGCTGCTGGCTCCCACCAGCTCTCCATGGGCCAACCTCACAATGCTGCAGGGCCCAGCCCGCATACACTGC  1888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925  GGCAGCTGCTGGCTCCCACCAGCTCTCCATGGGCCAACCTCACAATGCTGCAGGGCCCAGCCCGCATACACTGC  1998

Query 1889  GCCGAGCTGTTAAAAAACCCGCTCCAGCACCCCCGAAACCGGGCAACCCACCTCCTGGCCACCCCGGGGGCCAG  1962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999  GCCGAGCTGTTAAAAAACCCGCTCCAGCACCCCCGAAACCGGGCAACCCACCTCCTGGCCACCCCGGGGGCCAG  2072

Query 1963  AGTTCTTCAGGAACATCTCAGCATCCACCCAGTCTGTCACCAAAGCCACCCACCCGAAGCCCCTCTCCTCCCAC  2036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073  AGTTCTTCAGGAACATCTCAGCATCCACCCAGTCTGTCACCAAAGCCACCCACCCGAAGCCCCTCTCCTCCCAC  2146

Query 2037  CCAGCACACGGGCCAGCCTCCAGGCCAGCCCTCCGCCCCCTCCCAGCTCTCAGCACCCCGGAGGTACTCCAGCA  2110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147  CCAGCACACGGGCCAGCCTCCAGGCCAGCCCTCCGCCCCCTCCCAGCTCTCAGCACCCCGGAGGTACTCCAGCA  2220

Query 2111  GCTTGTCTCCAATCCAAGCTCCCAATCACCCACCGCCGCAGCCCCCTACGCAGGCCACGCCACTGATGCACACC  2184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221  GCTTGTCTCCAATCCAAGCTCCCAATCACCCACCGCCGCAGCCCCCTACGCAGGCCACGCCACTGATGCACACC  2294

Query 2185  AAACCCAATAGCCAGGGCCCTCCCAACCCCATGGCATTGCCCAGTGAGCATGGACTTGAGCAGCCATCTCACAC  2258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295  AAACCCAATAGCCAGGGCCCTCCCAACCCCATGGCATTGCCCAGTGAGCATGGACTTGAGCAGCCATCTCACAC  2368

Query 2259  CCCTCCCCAGACTCCAACGCCCCCCAGTACTCCGCCCCTAGGAAAACAGAACCCCAGTCTGCCAGCTCCTCAGA  2332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369  CCCTCCCCAGACTCCAACGCCCCCCAGTACTCCGCCCCTAGGAAAACAGAACCCCAGTCTGCCAGCTCCTCAGA  2442

Query 2333  CCCTGGCAGGGGGTAACCCTGAAACTGCACAGCCACATGCTGGAACCTTACCGAGACCGAGACCAGTACCAAAG  2406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443  CCCTGGCAGGGGGTAACCCTGAAACTGCACAGCCACATGCTGGAACCTTACCGAGACCGAGACCAGTACCAAAG  2516

Query 2407  CCAAGGAACCGGCCCAGCGTGCCCCCACCCCCCCAACCTCCTGGTGTCCACTCAGCTGGGGACAGCAGCCTCAC  2480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517  CCAAGGAACCGGCCCAGCGTGCCCCCACCCCCCCAACCTCCTGGTGTCCACTCAGCTGGGGACAGCAGCCTCAC  2590

Query 2481  CAACACAGCACCAACAGCTTCCAAGATAGTAACA----------------------------------------  2514
            ||||||||||||||||||||||||||||||||||                                        
Sbjct 2591  CAACACAGCACCAACAGCTTCCAAGATAGTAACAGATGCCCTTCCTAGTGCCCTCACAGGTGGGGAAGGTTTCC  2664

Query 2515  ---------------------------------------------------------GACTCCAATTCCAGGGT  2531
                                                                     |||||||||||||||||
Sbjct 2665  AGGACTAAGATGTATGACCTGCCATATTCAGTAAGAACTGAGATTGGAATATTTAATGACTCCAATTCCAGGGT  2738

Query 2532  TTCAGAACCGCATCGCAGCATCTTTCCTGAAATGCACTCAGACTCAGCCAGCAAAGACGTGCCTGGCCGCATCC  2605
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739  TTCAGAACCGCATCGCAGCATCTTTCCTGAAATGCACTCAGACTCAGCCAGCAAAGACGTGCCTGGCCGCATCC  2812

Query 2606  TGCTGGATATAGACAATGATACCGAGAGCACTGCCCTG------------------------------------  2643
            ||||||||||||||||||||||||||||||||||||||                                    
Sbjct 2813  TGCTGGATATAGACAATGATACCGAGAGCACTGCCCTGTGAAGAAAGCCCTTTCCCAGCCCTCCACCACTTCCA  2886

Query 2644  --------------------------------------------------------------------------  2643
                                                                                      
Sbjct 2887  CCCTGGCGAGTGGAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTTTCAGTGGAGGA  2960

Query 2644  --------------------------------------------------------------------------  2643
                                                                                      
Sbjct 2961  CAAAGGAGGGCCTCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGC  3034

Query 2644  --------------------------------------------------------------------------  2643
                                                                                      
Sbjct 3035  TGAATGACCTGTGTCTTGAAGAAGTTGGCTTTCTTTACATGGGAAGGAAATCATGCCAAAAAAATCCAAAACAA  3108

Query 2644  --------------------------------------------------------------------------  2643
                                                                                      
Sbjct 3109  AGAAGTACCTGGAGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGG  3182

Query 2644  --------------------------------------------------------------------------  2643
                                                                                      
Sbjct 3183  GCAGCACCTACAGCAACTTGGAATGAGTAAGAAGCAGTGCGTTAACTATCTATTTAATAAAATGCGCTCATTAT  3256

Query 2644  --------------------------------------------------------------------------  2643
                                                                                      
Sbjct 3257  GCAAGTCGCCTACTCTCTGCTACCTGGACGTTCATTCTTATGTATTAGGAGGGAGGCTGCGCTCCTTCAGACTT  3330

Query 2644  --------------------------------------------------------------------------  2643
                                                                                      
Sbjct 3331  GCTGCAGAATCATTTTGTATCATGTATGGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGATGGTGA  3404

Query 2644  --------------------------------------------------------------------------  2643
                                                                                      
Sbjct 3405  CTGCTGGCTCTGTCACCTCATCAAACTGGATGTGACCCATGCCGCCTCGTTGGATTGTCGGAATGTAGACAGAA  3478

Query 2644  --------------------------------------------------------------------------  2643
                                                                                      
Sbjct 3479  ATGTACTGTTCTTTTTTTTTTTTTTAAACAATGTAATTGCTACTTGATAAGGACCGAACATTATTCTAGTTTCA  3552

Query 2644  ------------------------------------------  2643
                                                      
Sbjct 3553  TGTTTAATTTGAATTAAATATATTCTGTGGTTTATATGAAAA  3594

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