Construct: ORF TRCN0000474970

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF011632.1_s317c1
Derived from:
ccsbBroadEn_03526
DNA Barcode:
TTAAGGCAACATTGCCGTCATCAA
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ARHGAP17 (55114)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000474970
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 55114 ARHGAP17 Rho GTPase activating prote... NM_001006634.3 100% 100%
2 human 55114 ARHGAP17 Rho GTPase activating prote... XM_011545873.3 96.4% 96.4% 723_818del
3 human 55114 ARHGAP17 Rho GTPase activating prote... XM_011545874.3 94.9% 94.8% (many diffs)
4 human 55114 ARHGAP17 Rho GTPase activating prote... XM_011545875.2 92.3% 92.2% (many diffs)
5 human 55114 ARHGAP17 Rho GTPase activating prote... XM_011545876.2 91.9% 91.8% (many diffs)
6 human 55114 ARHGAP17 Rho GTPase activating prote... XM_024450336.1 91.2% 91.2% 0_1ins231
7 human 55114 ARHGAP17 Rho GTPase activating prote... NM_018054.6 91.1% 91.1% 1488_1489ins234
8 human 55114 ARHGAP17 Rho GTPase activating prote... XM_011545877.3 88% 88% 0_1ins231;492_587del
9 human 55114 ARHGAP17 Rho GTPase activating prote... XM_011545878.3 87.9% 87.9% 723_818del;1584_1585ins234
10 human 55114 ARHGAP17 Rho GTPase activating prote... XM_017023390.1 83.3% 83.3% (many diffs)
11 human 55114 ARHGAP17 Rho GTPase activating prote... XR_950810.2 73.5% 1_110del;2625_2721del;2851_3594del
12 human 55114 ARHGAP17 Rho GTPase activating prote... XR_950809.2 71.6% (many diffs)
13 human 55114 ARHGAP17 Rho GTPase activating prote... XR_950811.2 67% (many diffs)
14 mouse 70497 Arhgap17 Rho GTPase activating prote... NM_144529.2 80.2% 84.3% (many diffs)
15 mouse 70497 Arhgap17 Rho GTPase activating prote... XM_006508201.3 76.2% 80.3% (many diffs)
16 mouse 70497 Arhgap17 Rho GTPase activating prote... NM_001122640.1 76.2% 79.4% (many diffs)
17 mouse 70497 Arhgap17 Rho GTPase activating prote... NM_001122641.1 72.3% 76.8% (many diffs)
18 mouse 70497 Arhgap17 Rho GTPase activating prote... NM_001122642.1 68.4% 72% (many diffs)
19 mouse 70497 Arhgap17 Rho GTPase activating prote... NM_001122643.1 68.4% 72.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2709
ORF length:
2643
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgaa gaagcagttc aaccgcatga agcagctggc taaccagacc gtgggcagag
121ctgagaaaac agaagtcctt agtgaagatc tattacagat tgagagacgc ctggacacgg
181tgcggtcaat atgccaccat tcccataagc gcttggtggc atgtttccag ggccagcatg
241gcaccgatgc cgagaggaga cacaaaaaac tgcctctgac agctcttgct caaaatatgc
301aagaagcatc gactcagctg gaagactctc tcctggggaa gatgctggag acgtgtggag
361atgctgagaa tcagctggct ctcgagctct cccagcacga agtctttgtt gagaaggaga
421tcgtggaccc tctgtacggc atagctgagg tggagattcc caacatccag aagcagagga
481agcagcttgc aagattggtg ttagactggg attcagtcag agccaggtgg aaccaagctc
541acaaatcctc aggaaccaac tttcaggggc ttccatcaaa aatagatact ctaaaggaag
601agatggatga agctggaaat aaagtagaac agtgcaagga tcaacttgca gcagacatgt
661acaactttat ggccaaagaa ggggagtatg gcaaattctt tgttacgtta ttagaagccc
721aagcagatta ccatagaaaa gcattagcag tcttagaaaa gaccctcccc gaaatgcgag
781cccatcaaga taagtgggcg gaaaaaccag cctttgggac tcccctagaa gaacacctga
841agaggagcgg gcgcgagatt gcgctgccca ttgaagcctg tgtcatgctg cttctggaga
901caggcatgaa ggaggagggc cttttccgaa ttggggctgg ggcctccaag ttaaagaagc
961tgaaagctgc tttggactgt tctacttctc acctggatga gttctattca gacccccatg
1021ctgtagcagg tgctttaaaa tcctatttac gggaattgcc tgaacctttg atgactttta
1081atctgtatga agaatggaca caagttgcaa gtgtgcagga tcaagacaaa aaacttcaag
1141acttgtggag aacatgtcag aagttgccac cacaaaattt tgttaacttt agatatttga
1201tcaagttcct tgcaaagctt gctcagacca gcgatgtgaa taaaatgact cccagcaaca
1261ttgcgattgt gttaggccct aacttgttat gggccagaaa tgaaggaaca cttgctgaaa
1321tggcagcagc cacatccgtc catgtggttg cagtgattga acccatcatt cagcatgccg
1381actggttctt ccctgaagag gtggaattta atgtatcaga agcatttgta cctctcacca
1441ccccgagttc taatcactca ttccacactg gaaacgactc tgactcgggg accctggaga
1501ggaagcggcc tgctagcatg gcggtgatgg aaggagactt ggtgaagaag gaaagctttg
1561gtgtgaagct tatggacttc caggcccacc ggcggggtgg cactctaaat agaaagcaca
1621tatcccccgc tttccagccg ccacttccgc ccacagatgg cagcaccgtg gtgcccgctg
1681gcccagagcc ccctccccag agctctaggg ctgaaagcag ctctgggggt gggactgtcc
1741cctcttccgc gggcatactg gagcaggggc cgagcccagg cgacggcagt cctcccaaac
1801cgaaggaccc tgtatctgca gctgtgccag caccagggag aaacaacagt cagatagcat
1861ctggccaaaa tcagccccag gcagctgctg gctcccacca gctctccatg ggccaacctc
1921acaatgctgc agggcccagc ccgcatacac tgcgccgagc tgttaaaaaa cccgctccag
1981cacccccgaa accgggcaac ccacctcctg gccaccccgg gggccagagt tcttcaggaa
2041catctcagca tccacccagt ctgtcaccaa agccacccac ccgaagcccc tctcctccca
2101cccagcacac gggccagcct ccaggccagc cctccgcccc ctcccagctc tcagcacccc
2161ggaggtactc cagcagcttg tctccaatcc aagctcccaa tcacccaccg ccgcagcccc
2221ctacGCAGGC CACGCCACTG ATGCACACCA AACCCAATAG CCAGGGCCCT CCCAACCCCA
2281TGGCATTGCC CAGTGAGCAT GGACTTGAGC AGCCATCTCA CACCCCTCCC CAGACTCCAA
2341CGCCCCCCAG TACTCCGCCC CTAGGAAAAC AGAACCCCAG TCTGCCAGCT CCTCAGACCC
2401TGGCAGGGGG TAACCCTGAA ACTGCACAGC CACATGCTGG AACCTTACCG AGACCGAGAC
2461CAGTACCAAA GCCAAGGAAC CGGCCCAGCG TGCCCCCACC CCCCCAACCT CCTGGTGTCC
2521ACTCAGCTGG GGACAGCAGC CTCACCAACA CAGCACCAAC AGCTTCCAAG ATAGTAACAG
2581ACTCCAATTC CAGGGTTTCA GAACCGCATC GCAGCATCTT TCCTGAAATG CACTCAGACT
2641CAGCCAGCAA AGACGTGCCT GGCCGCATCC TGCTGGATAT AGACAATGAT ACCGAGAGCA
2701CTGCCCTGTG CCCAACTTTC TTGTACAAAG TGGTTGATAT CGGTAAGCCT ATCCCTAACC
2761CTCTCCTCGG TCTCGATTCT ACGTAGTAAT GAACTAGTCC GTAACTTGAA AGTATTTCGA
2821TTTCTTGGCT TTATATATCT TGTGGAAAGG ACGATTAAGG CAACATTGCC GTCATCAAAC
2881GCGTTAAGTC gacaatcaac ctctggatta caaaatttgt gaaagatt

Download FASTA (ORF) (Full)