Nucleotide Global Alignment
Description
- Query:
- TRCN0000475094
- Subject:
- XM_006530395.3
- Aligned Length:
- 2499
- Identities:
- 1547
- Gaps:
- 777
Alignment
Query 1 ATGACGGATGAACAGGTGTGCGAGACTGTGGAGAAATACGGAGCCAACCGGGAGGAGTGTGCCCGCCTCAACGC 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CTCCCTCTCCTGCCTCAGGAATGTCCACATGTCAGGAGGCAACCTTTCCAAACAAGACTGGACCATCCAGTGGC 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 CCACCACAGAGACGGGGAAGGAGAACAATCCCGTGTGCCCCCCGGAGCCCACCCCGTGGATCCGCACCCATCTC 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 TCCCAGAGCCCCAGGGTCCCGTCCAAGTGCGTCCAGCACTATTGTCACACCAGCCCCACTCCCGGGGCCCCTGT 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 GTACACCCACGTGGACAGGCTTACCGTGGACGCCTACCCGGGCTTGTGCCCGCCCCCGCCACTGGAGTCGGGCC 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 ACCGTTCCCTGCCCCCATCGCCCCGGCAGCGGCACGCGGTCCGCACCCCGCCGCGCACCCCCAACATCGTCACC 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 ACCGTGACCCCGCCGGGCACGCCGCCCATGAGGAAGAAGAACAAGCTGAAGCCCCCGGGGACCCCACCGCCCTC 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 CTCCCGAAAACTGATACACTTGATCCCGGGATTCACCGCGCTGCATCGGAGCAAATCCCACGAGTTCCAGCTGG 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 GGCACCGCGTGGACGAGGCCCACACGCCCAAAGCCAAGAAGAAGAGCAAACCCTTGAACCTCAAGATCCACAGC 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 AGCGTAGGCAGCTGCGAGAACATCCCCTCTCAGCAGCGCTCCCCGCTGCTGTCCGAGCGCTCCCTCCGCTCCTT 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 CTTTG-----TGGGACACGCACCTTTCCTGCCTTCCACC--CCTCCTGTTCACACTG----AGGCCAACTTCTC 803
.|| |.||| |..||||..|||.| | .|||.|| |||| .||.
Sbjct 1 --ATGATGAATAGGA----------TGTTGCCGACCAACAGC--------AACAATGTATCAGGC-----GCTT 49
Query 804 TG-CAAACACACTGTCAGTGCCACGCTGGTCCCCGCAGATCCCTCGCAGAGATCTTGGCAACTCCATCAAGCAC 876
|| |.||||||||.||.||.||.||||||||.||.||||||||.||||||||.||||||||.||||||||||||
Sbjct 50 TGCCGAACACACTCTCTGTACCTCGCTGGTCACCACAGATCCCACGCAGAGACCTTGGCAATTCCATCAAGCAC 123
Query 877 AGGTTTTCCACCAAGTACTGGATGTCTCAGACGTGCACAGTCTGTGGGAAAGGGATGCTTTTTGGCCTCAAGTG 950
||||||||||||||||||||||||||||||||||||||.|||||.|||||||||||||||||||||||||||||
Sbjct 124 AGGTTTTCCACCAAGTACTGGATGTCTCAGACGTGCACGGTCTGCGGGAAAGGGATGCTTTTTGGCCTCAAGTG 197
Query 951 TAAAAACTGCAAGTTAAAGTGCCACAACAAATGCACCAAAGAAGCCCCACCCTGTCATCTTCTGATCATCCACC 1024
|||||||||||||||||||||||||||.||||||||||||||||||||.||||||||.||.|||||.|||||||
Sbjct 198 TAAAAACTGCAAGTTAAAGTGCCACAATAAATGCACCAAAGAAGCCCCGCCCTGTCACCTCCTGATTATCCACC 271
Query 1025 GAGGAGATCCAGCAAGGTTAGTCCGGACAGAGTCCGTTCCGTGTGACATCAACAACCCTCTACGGAAGCCACCT 1098
|||||||.||||||||||||||.||.||.|||||.||.||.|||||||||||||||||..|.||||||||..|.
Sbjct 272 GAGGAGACCCAGCAAGGTTAGTGCGAACGGAGTCGGTGCCCTGTGACATCAACAACCCGGTCCGGAAGCCTGCC 345
Query 1099 CGCTATTCAGACCTGCACATCAGTCAGACGCTCCCCAAAACCAACAAAATCAACAAGGACCACATCCCTGTCCC 1172
||.||||||||.||.||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||
Sbjct 346 CGATATTCAGATCTCCACATCAGTCAGACTCTCCCCAAAACCAACAAAATCAACAAGGACCACATCCCTGTCCC 419
Query 1173 TTACCAGCCAGACTCCAGCAGCAACCCCTCCTCCACGACGTCCTCCACGCCCTCCTCGCCAGCACCCCCCCTCC 1246
||||||||||||||||||||||||.||||||||||||||||||||||||||||||||.||.|||||||||||||
Sbjct 420 TTACCAGCCAGACTCCAGCAGCAATCCCTCCTCCACGACGTCCTCCACGCCCTCCTCACCGGCACCCCCCCTCC 493
Query 1247 CTCCTAGTGCCACGCCGCCTTCTCCCCTACACCCTTCCCCACAGTGCACACGGCAGCAGAAGAACTTCAACCTG 1320
||||.||.||||||||||||||||||||.|||||.|||||.||||||.|..|.|||.|.|||||||||||||||
Sbjct 494 CTCCCAGCGCCACGCCGCCTTCTCCCCTGCACCCCTCCCCGCAGTGCCCGAGACAGAAAAAGAACTTCAACCTG 567
Query 1321 CCAGCATCCCACTACTACAAATACAAGCAGCAGTTCATCTTCCCAGATGTGGTGCCGGTGCCGGAGACGCCGAC 1394
|||||.|||||||||||||||||||||||.||||||||||||||||||||||||||.||.||.|||||.||.||
Sbjct 568 CCAGCTTCCCACTACTACAAATACAAGCAACAGTTCATCTTCCCAGATGTGGTGCCTGTACCAGAGACACCCAC 641
Query 1395 CCGGGCGCCCCAGGTCATCCTGCATCCGGTGACCTCGAATCCAATCTTGGAAGGAAATCCATTACTTCAAATTG 1468
||||||.|||||.||||||||||||||.||.|||||.|||.||||||||||||||||.||||||||||||||||
Sbjct 642 CCGGGCACCCCAAGTCATCCTGCATCCTGTCACCTCAAATACAATCTTGGAAGGAAACCCATTACTTCAAATTG 715
Query 1469 AAGTGGAGCCAACGTCGGAGAATGAAGAGGTCCATGATGAGGCCGAAGAGTCAGAGGATGACTTCGAGGAGATG 1542
|||||||.|||||.||.|||||.||||||..|||..||||.||.||.|||||.|||||.||.||.||.||||||
Sbjct 716 AAGTGGAACCAACCTCCGAGAACGAAGAGAGCCACAATGAAGCAGAGGAGTCCGAGGACGAGTTTGAAGAGATG 789
Query 1543 AACCTGTCCCTCCTCTCGGCCCGGAGCTTCCCACGCAAGGCCAGCCAGACCAGCATCTTCCTTCAGGAGTGGGA 1616
|||||.|||||||||||.||||||||||||||||||||.|||||||||||||||||||||||||||||||||||
Sbjct 790 AACCTATCCCTCCTCTCAGCCCGGAGCTTCCCACGCAAAGCCAGCCAGACCAGCATCTTCCTTCAGGAGTGGGA 863
Query 1617 CATCCCCTTTGAGCAGCTGGAGATCGGCGAGCTCATTGGAAAGGGCCGCTTTGGGCAAGTGTACCACGGCCGCT 1690
||||||.|||||.|||||.|||||.|||||||||||.||.|||||.|||||.|||||.||.||||||||.||||
Sbjct 864 CATCCCGTTTGAACAGCTAGAGATTGGCGAGCTCATCGGGAAGGGTCGCTTCGGGCAGGTTTACCACGGACGCT 937
Query 1691 GGCATGGCGAGGTGGCCATCCGGCTGATTGACATTGAGAGGGACAACGAGGACCAGCTCAAGGCCTTCAAGCGG 1764
||||.||||||||||||||||||.||||||||||.|||||||||||.|||||||||||.|||||||||||||||
Sbjct 938 GGCACGGCGAGGTGGCCATCCGGTTGATTGACATAGAGAGGGACAATGAGGACCAGCTTAAGGCCTTCAAGCGG 1011
Query 1765 GAGGTGATGGCCTACAGGCAGACACGGCATGAGAACGTGGTGCTTTTCATGGGTGCCTGCATGAGCCCGCCTCA 1838
||.||||||||||||||||||||..||||.||||||||||||||.||||||||.||||||||||||||.||.||
Sbjct 1012 GAAGTGATGGCCTACAGGCAGACGAGGCACGAGAACGTGGTGCTCTTCATGGGAGCCTGCATGAGCCCACCCCA 1085
Query 1839 CCTGGCCATCATCACCAGCCTCTGTAAGGGACGGACGCTCTATTCCGTTGTGAGGGATGCCAAAATCGTTTTGG 1912
|.||||||||||||||||||||||||||||||||||.|||||.||.||.||||||||.|||||.||.||.||||
Sbjct 1086 CTTGGCCATCATCACCAGCCTCTGTAAGGGACGGACACTCTACTCTGTGGTGAGGGACGCCAAGATTGTCTTGG 1159
Query 1913 ATGTCAACAAAACCAGGCAGATTGCTCAAGAAATTGTGAAGGGCATGGGCTACCTCCACGCCAAGGGAATCCTA 1986
||||||||||||||||||||||.||.|||||.|||||.|||||||||||||||||||||||||||||.|||||.
Sbjct 1160 ATGTCAACAAAACCAGGCAGATCGCGCAAGAGATTGTAAAGGGCATGGGCTACCTCCACGCCAAGGGGATCCTT 1233
Query 1987 CACAAGGACCTCAAGTCAAAGAACGTCTTCTATGACAACGGCAAAGTGGTCATCACGGACTTTGGACTCTTCAG 2060
||.|||||||||||.||.||||||||||||||||||||||||||||||||||||||.||||||||.||||||||
Sbjct 1234 CATAAGGACCTCAAATCGAAGAACGTCTTCTATGACAACGGCAAAGTGGTCATCACAGACTTTGGGCTCTTCAG 1307
Query 2061 CATTTCTGGGGTGCTGCAGGCTGGCAGGCGGGAGGACAAACTGCGCATCCAGAATGGCTGGCTATGCCACCTGG 2134
||||||.||||||||||||||||||.|||||||.|||||||||||.||||||||.||||||||.||.|||||||
Sbjct 1308 CATTTCCGGGGTGCTGCAGGCTGGCCGGCGGGACGACAAACTGCGGATCCAGAACGGCTGGCTGTGTCACCTGG 1381
Query 2135 CACCAGAGATCATCCGCCAGCTGTCCCCCGACACAGAGGAGGATAAGCTCCCCTTCTCCAAGCACTCTGACGTC 2208
|.|||||.||||||||||||||||||||.||||||||.|||||.||||||||.||||||||||||||.||.|||
Sbjct 1382 CCCCAGAAATCATCCGCCAGCTGTCCCCTGACACAGAAGAGGACAAGCTCCCATTCTCCAAGCACTCGGATGTC 1455
Query 2209 TTTGCCCTTGGCACAATCTGGTATGAACTCCACGCCAGGGAATGGCCTTTCAAGACCCAACCAGCAGAGGCAAT 2282
|||||.||||||||.|||||||||||.||||||||||||||.|||||.||||||||||||||||||||||||||
Sbjct 1456 TTTGCGCTTGGCACCATCTGGTATGAGCTCCACGCCAGGGAGTGGCCATTCAAGACCCAACCAGCAGAGGCAAT 1529
Query 2283 AATCTGGCAAATGGGCACAGGCATGAAACCCAACCTCAGCCAGATTGGCATGGGAAAAGAAATCTCGGACATTC 2356
.||.|||||.||||||||.||.|||||.||||||||||||||||||||||||||||||||||||||||||||.|
Sbjct 1530 CATTTGGCAGATGGGCACGGGAATGAAGCCCAACCTCAGCCAGATTGGCATGGGAAAAGAAATCTCGGACATAC 1603
Query 2357 TTCTCTTCTGCTGGGCCTTTGAACAAGAAGAGAGACCTACCTTCACCAAGCTCATGGACATGCTGGAGAAACTG 2430
|.|||||||||||||||||.||.||.||||||.|.||.|||||.||||||||||||||||||||.|||||||||
Sbjct 1604 TGCTCTTCTGCTGGGCCTTCGAGCAGGAAGAGCGGCCCACCTTTACCAAGCTCATGGACATGCTAGAGAAACTG 1677
Query 2431 CCAAAGCGAAACCGTCGCCTGTCTCACCCTGGACATTTCTGGAAGTCTGCAGAGCTG 2487
||||||||||||||.||||||||.|||||.|||||||||||||||||||||||||||
Sbjct 1678 CCAAAGCGAAACCGCCGCCTGTCGCACCCCGGACATTTCTGGAAGTCTGCAGAGCTG 1734
