Nucleotide Global Alignment

Description

Query:
TRCN0000475105
Subject:
XR_001777994.1
Aligned Length:
3997
Identities:
709
Gaps:
3196

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCCCCTGCCCTTTGGGTAAGGGAGGAGGAAGCCGGAGAGCGCGCTTTGCCTGAGCCGGCCCGAGAGCGGCTGAG  74

Query    1  ------------------------ATGGCTCCGGCCGCGGACCGAGAGGGCTACTGGGGCCCCACGACCTCCAC  50
                                    |||||||||||.|.||||||..|.|||||.||||||||||||||||||||
Sbjct   75  CAGGGTGTGTGGGGCGTCAGCGCGATGGCTCCGGCTGTGGACCGCAAAGGCTATTGGGGCCCCACGACCTCCAC  148

Query   51  GCTGGACTGGTGCGAGGAGAACTACTCCGTGACCTGGTACATCGCCGAGTTCTGGAATACAGTGAGTAACCTGA  124
            ..||||||||||.|||||||||||....|||||||.||.|.||||.||||||||||||||||||||||||||||
Sbjct  149  ATTGGACTGGTGTGAGGAGAACTATGTGGTGACCTTGTTCGTCGCTGAGTTCTGGAATACAGTGAGTAACCTGA  222

Query  125  TCATGATTATACCTCCAATGTTCGGTGCAATTCAGAGTGTTAGAGACGGTCTGGAAAAACGGTACATTGCTTCT  198
            |.|||||.|||||||||||.||.|||||||||||..|..||||||||.|.|||||.||.||||||||||||.||
Sbjct  223  TTATGATCATACCTCCAATTTTTGGTGCAATTCAAGGCATTAGAGACAGACTGGAGAAGCGGTACATTGCTGCT  296

Query  199  TATTTAGCACTCACAGTGGTAGGAATGGGATCCTGGTGCTTCCACATGACTCTGAAATATGAAATGCAGCTATT  272
            ||.|||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||.||
Sbjct  297  TACTTAGCACTCACAGTGGTAGGAATGGGATCCTGGTGTTTCCACATGACTCTGAAATATGAAATGCAGCTGTT  370

Query  273  GGATGAACTCCCAATGATATACAGCTGTTGCATATTTGTGTACTGCATGTTTGAATGTTTCAAGATCAAGAACT  346
            ||||||.|||||.|||||.||||||||.|||||||||||.||||||||||||||.||||||||||..||||.||
Sbjct  371  GGATGAGCTCCCCATGATTTACAGCTGCTGCATATTTGTATACTGCATGTTTGAGTGTTTCAAGACAAAGAGCT  444

Query  347  CAGTAAACTACCATCTGCTTTTTACCTTAGTTCTATTCAGTTTAATAGTAACCACAGTTTACCTTAAGGTAAAA  420
            ||.|||||||||||||.|||||||||.||.||||||.||||||||.||||||.||..|||||||.||.||.|||
Sbjct  445  CAATAAACTACCATCTTCTTTTTACCCTATTTCTATACAGTTTAACAGTAACTACGATTTACCTAAAAGTCAAA  518

Query  421  GAGCCAATATTCCATCAGGTCATGTATGGAATGTTGGTCTTTACATTAGTACTTCGATCTATTTATATTGTTA-  493
            ||.||.||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||| 
Sbjct  519  GAACCTATATTCCATCAGGTCATGTATGGAATGTTGGTCTTTACATTAGTACTTCGTTCTATTTATATTGTTAC  592

Query  494  -----------------------------------------------------------------CATGGGTTT  502
                                                                             |||||||||
Sbjct  593  ATGACATTCATTTCACCCTACTGAAGAATTTTGCTTTGTACTTCTTCTGAGAACTGAAGATTTGCCATGGGTTT  666

Query  503  ATCCATGGCTTAGAGGACTGGGTTATACATCATTGGGTATATTTTTATTGGGATTTTTATTTTGGAATATAGAT  576
            |||||||||||||||||||.|||||||||||.||...|.|.|||||||||||.||||||||.||||||||||||
Sbjct  667  ATCCATGGCTTAGAGGACTAGGTTATACATCCTTAACTGTCTTTTTATTGGGGTTTTTATTGTGGAATATAGAT  740

Query  577  AACATATTTTGTGAGTCACTGAGGAACTTTCGAAAGAAGGTACCACCTATCATAGGTATTACCACACAATTTCA  650
            |||||.||||||||.||||||||||||||||||||||..||.||.||..||.|||||.||||.|||||.|||||
Sbjct  741  AACATCTTTTGTGATTCACTGAGGAACTTTCGAAAGAGAGTGCCCCCCGTCCTAGGTGTTACAACACAGTTTCA  814

Query  651  TGCATGGTGGCATATTTTAACTGGCCTTGGTTCCTATCTTCACATCCTTTTCAGTTTGTATACAAGAACACTTT  724
            ||||||||||||||||.||||||||||.|||||.|||||||||||||||||||||||.||||||||||||||||
Sbjct  815  TGCATGGTGGCATATTCTAACTGGCCTGGGTTCTTATCTTCACATCCTTTTCAGTTTATATACAAGAACACTTT  888

Query  725  ACCTGAGATATAGGCCAAAAGTGAAGTTTCTCTTTGGAATCTGGCCAGTGATCCTGTTTGAGCCTCTCAGGAAG  798
            |||||||.||.|||||||||||||||||||||||||||||||||||||...||.|||||||.||||..||||||
Sbjct  889  ACCTGAGGTACAGGCCAAAAGTGAAGTTTCTCTTTGGAATCTGGCCAGCAGTCATGTTTGAACCTCAGAGGAAG  962

Query  799  CAT-----------------------------------------------------------------------  801
            ||.                                                                       
Sbjct  963  CACTGATGAATTATTCTACCAAGAAAATAAAAAACACCTACTGTATGTAGTTCTGCCAAGATGGTCAAGAACCC  1036

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 1037  CCCAAAGACTTGTACATTTGAAGACACCATGCCCATCACAAGAGATGAATGACTCAGCCTGAATGACCCAGCCA  1110

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 1111  TAGAGAATGGGCAATTGGCCTGTTGGGTATTTAGCTCCTGGCTTTATCTCGTTTGCCCTGGACCTAAGATGCTT  1184

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 1185  AGAGAAAAACAGAAAGTGTATATTTATATTCTAGAATGGTGGAGAATTTGGGCTTTTCTTAACAGGTTAACAGT  1258

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 1259  TTGTGCTGGTCATTCATGGAAAATTAATATTTTTTTCTTTTTTTACAAGAGTTGCATGTTAATTGTATCTTTAT  1332

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 1333  TAATTTTTAATTAAATATTGAACAAAGTCATTAAGTACTGGCAAAATACCATATCCAGATGGTTGACTGTGAGC  1406

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 1407  CAGCACTTAGCCGTGTCATCTTTGATTTACATTCTTATATTAATTTCACAGATGGCTTTCCAGTAATAAAAAAG  1480

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 1481  AAAAGGTGTGGGATTCTAGGCAGCTCCTTGCTATCTGCCTTGGTGCTAGCTGGAGTCTTAGAAGTAAACTCTGA  1554

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 1555  CCTGCCAGTGAGTGGGCTCTGTTCTCATCACATTCAAGATTTTGTCTTGGACTCTGTGGCCCACAGCCAATCAA  1628

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 1629  AGGGGTGGGCCATCCAACACCCCTTCAGAAGCTTTTCCAGAACACCCGTGGAATGTAGTCCTCTCACCAGTTAG  1702

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 1703  AGGCTGTTGTTTTGCTTTCTTTGATCTTCAAATTATTATTACTATTGTGTCTAGCAAATTTAACTGGTAATCTG  1776

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 1777  TAAGACAACACAGTTTAATTGACTTTATCAGGGAAAGTTGTCAGTTTTTTAATTTTTCCATTATGCAGTATGCA  1850

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 1851  TAGTGAAGCAAATAGTTCTAATTCGGATTTGAATGTATACGAAATTGAATTAATAATCACAAACAGTAAATGAA  1924

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 1925  AGATCATATGTTATATCTAAGCTATGGCCCCAAAAGAAAAGTGGGGTTTTTTTCCCCATGTGAAATTGGTTTTT  1998

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 1999  AAAAAATTCTCATATTTTCAATATTCATTAACAAGCTTTAGCCTGGCAGGGTGATGCATGTCTTTAATCACAGC  2072

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 2073  ACTTGAAAGGCAGAGATAGGCAGATCTCTGTGATTTTAAGGCCAGCCTGGCCTATATAGTTCCAGGATAGTCAG  2146

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 2147  GAATACATAGTGAAACTCTGTCTCAAAAAAGAAAAACAGTGTTGGTTCATTAGTTAGCCTTGGAATATTTATAA  2220

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 2221  AACCAAAAATATTTCCTTCACCCTCTGGCTTTAGTTTTTTAATGCCAAGTGCCAGTTTCCTTCCTTTACATCTC  2294

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 2295  AGGTGGCCATTAGACAAACACACCTTTTATAAAAGCAAGACATGCCAAAACATAAGAAGACCTTAGTTGTACTT  2368

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 2369  TGATCATAGGCATAGATCAGAGTCTAGAACACATTTACTGAATTTTCCAGTTTCTTGTGTTCTGGAACAAGAAC  2442

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 2443  TGGACCAGAGACACATGAATGGTGATGGAAGTAGAGACCTTCTGTTAGGAAGAAAGAAAAATATTCCCCAAAAT  2516

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 2517  GAGAGTATGTCTAAGGACTAAGAAAGGTCTAAGGCTGAAAAGCCTTGGACCAGAAGAGTCTCTGCTCTTTATAG  2590

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 2591  GATCTTTGCATAGCCTCCATCTTTTCTGGCAATTAGGAAGGTAGGGTTTTTTGTTTGTTTGTTTGTTTGTTTGT  2664

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 2665  TTGTTTGTTTGTTTGTTTTTTAAAGCATGCTGTTTTGTTATGCATAAATCTGTTGGAAAGGTTTCCAGTCTTCC  2738

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 2739  TTTGGGATTGGCTTTTGTTTGTTTGCACTAGGATTTCCTATTCTCCTACCTCACTTTACCCCATCCTAAGAGCT  2812

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 2813  GTAGTTCCAAAAATCTTTGTGAGGAGCTAAAGGATGACTATCTATTTTGTATAATTCCCATGTTAATGAGGGAT  2886

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 2887  GGAGTCTTTGCCAAAGAGAGTCTTTTCCTATTTTATCTACTGGTTGGAGAGGAGGCTGTAGAGTTTTTGTTTTA  2960

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 2961  GGAGTTGCCTTGAATCCTTGTATCATAATGATAAATTGTACATGATTTTTTAAAAAAATGTAAGAATTTGGGCT  3034

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 3035  GGAGGAGTGGTTTAGCATTTAAGAGCACTAATTGCTCTTACAGAAGCCTTGAGTCTGATTCTCAGCACCCACAT  3108

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 3109  TGTAGCTCACAACCATCCATAACTATAGTTTCTAAGGTTCTAACAACTTCTTATAACATCTGCTGGCACCAGAC  3182

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 3183  ATGCACATTGTACACATACATATATAAGAAAAATATCCATATACCTAAAATAAATAATTTTTAAAAATGTCAAT  3256

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 3257  GTAAAAATAATATGATTATGTCAGCCATTAGCTCCAGAAAGGACCAGAATCAGGAAAAGCATAGCTATGCTTAT  3330

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 3331  GTAAATTATTCTGGATATGGTCCTTTAGGTTGTTAAAACAACAACAACCAAAACAAAATCCACAAACAAATAAA  3404

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 3405  CTGATAGTTATGCATTAAAGTTGTGTCAAAATATGGAAAGAACAATTTGTAGGAAAAAAAATTCAGTAGTGGAC  3478

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 3479  TAGATTAAAGAGAAGGAAGTATGGGATTGTAACCATTGAGTACCAACAGTGCCAAAAGAGAACATGAAAAGCAT  3552

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 3553  AAGGCTATAAGGACTGATCGTTACTTTGCTTTTAAGTAAGAAGTGAAAGCATTCTGTTTGTAGTCTGAAGAGAT  3626

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 3627  CCTTTAATTCCTTCAGCTTTTTAGTGGCTTATACTGTAGGTCCTTTTTATTACATACAGAGTAAATATATCTGG  3700

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 3701  TCTGATATTGTTGCTTGATGGTATTATAACTCCTATAATTTACATTAGGGAAAGAAAGTTCAACTTCAAGACCT  3774

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 3775  TTGGCAAATATAACCACCATTCTAGATGTATCTCAGCCTTAACAGAAATCTTACCTCCATCACTTGTACACTAA  3848

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 3849  GAACACTCCTATAAAAGGAATCAGTCCAACAGAAGAATTCTTAGCACAGCATTCAGAGCATTGGATCAACATAG  3922

Query  802  --------------------------------------------------------------------------  801
                                                                                      
Sbjct 3923  AGCATTTTGATGCTATTTTATTTTTGTTACCCCTGACTTTTAAAAAATGAAATAAAATTTTAATATTTCACAGA  3996

Query  802  -  801
             
Sbjct 3997  A  3997

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