Nucleotide Global Alignment
Description
- Query:
- TRCN0000475105
- Subject:
- XR_001777994.1
- Aligned Length:
- 3997
- Identities:
- 709
- Gaps:
- 3196
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCCCCTGCCCTTTGGGTAAGGGAGGAGGAAGCCGGAGAGCGCGCTTTGCCTGAGCCGGCCCGAGAGCGGCTGAG 74
Query 1 ------------------------ATGGCTCCGGCCGCGGACCGAGAGGGCTACTGGGGCCCCACGACCTCCAC 50
|||||||||||.|.||||||..|.|||||.||||||||||||||||||||
Sbjct 75 CAGGGTGTGTGGGGCGTCAGCGCGATGGCTCCGGCTGTGGACCGCAAAGGCTATTGGGGCCCCACGACCTCCAC 148
Query 51 GCTGGACTGGTGCGAGGAGAACTACTCCGTGACCTGGTACATCGCCGAGTTCTGGAATACAGTGAGTAACCTGA 124
..||||||||||.|||||||||||....|||||||.||.|.||||.||||||||||||||||||||||||||||
Sbjct 149 ATTGGACTGGTGTGAGGAGAACTATGTGGTGACCTTGTTCGTCGCTGAGTTCTGGAATACAGTGAGTAACCTGA 222
Query 125 TCATGATTATACCTCCAATGTTCGGTGCAATTCAGAGTGTTAGAGACGGTCTGGAAAAACGGTACATTGCTTCT 198
|.|||||.|||||||||||.||.|||||||||||..|..||||||||.|.|||||.||.||||||||||||.||
Sbjct 223 TTATGATCATACCTCCAATTTTTGGTGCAATTCAAGGCATTAGAGACAGACTGGAGAAGCGGTACATTGCTGCT 296
Query 199 TATTTAGCACTCACAGTGGTAGGAATGGGATCCTGGTGCTTCCACATGACTCTGAAATATGAAATGCAGCTATT 272
||.|||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||.||
Sbjct 297 TACTTAGCACTCACAGTGGTAGGAATGGGATCCTGGTGTTTCCACATGACTCTGAAATATGAAATGCAGCTGTT 370
Query 273 GGATGAACTCCCAATGATATACAGCTGTTGCATATTTGTGTACTGCATGTTTGAATGTTTCAAGATCAAGAACT 346
||||||.|||||.|||||.||||||||.|||||||||||.||||||||||||||.||||||||||..||||.||
Sbjct 371 GGATGAGCTCCCCATGATTTACAGCTGCTGCATATTTGTATACTGCATGTTTGAGTGTTTCAAGACAAAGAGCT 444
Query 347 CAGTAAACTACCATCTGCTTTTTACCTTAGTTCTATTCAGTTTAATAGTAACCACAGTTTACCTTAAGGTAAAA 420
||.|||||||||||||.|||||||||.||.||||||.||||||||.||||||.||..|||||||.||.||.|||
Sbjct 445 CAATAAACTACCATCTTCTTTTTACCCTATTTCTATACAGTTTAACAGTAACTACGATTTACCTAAAAGTCAAA 518
Query 421 GAGCCAATATTCCATCAGGTCATGTATGGAATGTTGGTCTTTACATTAGTACTTCGATCTATTTATATTGTTA- 493
||.||.||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||
Sbjct 519 GAACCTATATTCCATCAGGTCATGTATGGAATGTTGGTCTTTACATTAGTACTTCGTTCTATTTATATTGTTAC 592
Query 494 -----------------------------------------------------------------CATGGGTTT 502
|||||||||
Sbjct 593 ATGACATTCATTTCACCCTACTGAAGAATTTTGCTTTGTACTTCTTCTGAGAACTGAAGATTTGCCATGGGTTT 666
Query 503 ATCCATGGCTTAGAGGACTGGGTTATACATCATTGGGTATATTTTTATTGGGATTTTTATTTTGGAATATAGAT 576
|||||||||||||||||||.|||||||||||.||...|.|.|||||||||||.||||||||.||||||||||||
Sbjct 667 ATCCATGGCTTAGAGGACTAGGTTATACATCCTTAACTGTCTTTTTATTGGGGTTTTTATTGTGGAATATAGAT 740
Query 577 AACATATTTTGTGAGTCACTGAGGAACTTTCGAAAGAAGGTACCACCTATCATAGGTATTACCACACAATTTCA 650
|||||.||||||||.||||||||||||||||||||||..||.||.||..||.|||||.||||.|||||.|||||
Sbjct 741 AACATCTTTTGTGATTCACTGAGGAACTTTCGAAAGAGAGTGCCCCCCGTCCTAGGTGTTACAACACAGTTTCA 814
Query 651 TGCATGGTGGCATATTTTAACTGGCCTTGGTTCCTATCTTCACATCCTTTTCAGTTTGTATACAAGAACACTTT 724
||||||||||||||||.||||||||||.|||||.|||||||||||||||||||||||.||||||||||||||||
Sbjct 815 TGCATGGTGGCATATTCTAACTGGCCTGGGTTCTTATCTTCACATCCTTTTCAGTTTATATACAAGAACACTTT 888
Query 725 ACCTGAGATATAGGCCAAAAGTGAAGTTTCTCTTTGGAATCTGGCCAGTGATCCTGTTTGAGCCTCTCAGGAAG 798
|||||||.||.|||||||||||||||||||||||||||||||||||||...||.|||||||.||||..||||||
Sbjct 889 ACCTGAGGTACAGGCCAAAAGTGAAGTTTCTCTTTGGAATCTGGCCAGCAGTCATGTTTGAACCTCAGAGGAAG 962
Query 799 CAT----------------------------------------------------------------------- 801
||.
Sbjct 963 CACTGATGAATTATTCTACCAAGAAAATAAAAAACACCTACTGTATGTAGTTCTGCCAAGATGGTCAAGAACCC 1036
Query 802 -------------------------------------------------------------------------- 801
Sbjct 1037 CCCAAAGACTTGTACATTTGAAGACACCATGCCCATCACAAGAGATGAATGACTCAGCCTGAATGACCCAGCCA 1110
Query 802 -------------------------------------------------------------------------- 801
Sbjct 1111 TAGAGAATGGGCAATTGGCCTGTTGGGTATTTAGCTCCTGGCTTTATCTCGTTTGCCCTGGACCTAAGATGCTT 1184
Query 802 -------------------------------------------------------------------------- 801
Sbjct 1185 AGAGAAAAACAGAAAGTGTATATTTATATTCTAGAATGGTGGAGAATTTGGGCTTTTCTTAACAGGTTAACAGT 1258
Query 802 -------------------------------------------------------------------------- 801
Sbjct 1259 TTGTGCTGGTCATTCATGGAAAATTAATATTTTTTTCTTTTTTTACAAGAGTTGCATGTTAATTGTATCTTTAT 1332
Query 802 -------------------------------------------------------------------------- 801
Sbjct 1333 TAATTTTTAATTAAATATTGAACAAAGTCATTAAGTACTGGCAAAATACCATATCCAGATGGTTGACTGTGAGC 1406
Query 802 -------------------------------------------------------------------------- 801
Sbjct 1407 CAGCACTTAGCCGTGTCATCTTTGATTTACATTCTTATATTAATTTCACAGATGGCTTTCCAGTAATAAAAAAG 1480
Query 802 -------------------------------------------------------------------------- 801
Sbjct 1481 AAAAGGTGTGGGATTCTAGGCAGCTCCTTGCTATCTGCCTTGGTGCTAGCTGGAGTCTTAGAAGTAAACTCTGA 1554
Query 802 -------------------------------------------------------------------------- 801
Sbjct 1555 CCTGCCAGTGAGTGGGCTCTGTTCTCATCACATTCAAGATTTTGTCTTGGACTCTGTGGCCCACAGCCAATCAA 1628
Query 802 -------------------------------------------------------------------------- 801
Sbjct 1629 AGGGGTGGGCCATCCAACACCCCTTCAGAAGCTTTTCCAGAACACCCGTGGAATGTAGTCCTCTCACCAGTTAG 1702
Query 802 -------------------------------------------------------------------------- 801
Sbjct 1703 AGGCTGTTGTTTTGCTTTCTTTGATCTTCAAATTATTATTACTATTGTGTCTAGCAAATTTAACTGGTAATCTG 1776
Query 802 -------------------------------------------------------------------------- 801
Sbjct 1777 TAAGACAACACAGTTTAATTGACTTTATCAGGGAAAGTTGTCAGTTTTTTAATTTTTCCATTATGCAGTATGCA 1850
Query 802 -------------------------------------------------------------------------- 801
Sbjct 1851 TAGTGAAGCAAATAGTTCTAATTCGGATTTGAATGTATACGAAATTGAATTAATAATCACAAACAGTAAATGAA 1924
Query 802 -------------------------------------------------------------------------- 801
Sbjct 1925 AGATCATATGTTATATCTAAGCTATGGCCCCAAAAGAAAAGTGGGGTTTTTTTCCCCATGTGAAATTGGTTTTT 1998
Query 802 -------------------------------------------------------------------------- 801
Sbjct 1999 AAAAAATTCTCATATTTTCAATATTCATTAACAAGCTTTAGCCTGGCAGGGTGATGCATGTCTTTAATCACAGC 2072
Query 802 -------------------------------------------------------------------------- 801
Sbjct 2073 ACTTGAAAGGCAGAGATAGGCAGATCTCTGTGATTTTAAGGCCAGCCTGGCCTATATAGTTCCAGGATAGTCAG 2146
Query 802 -------------------------------------------------------------------------- 801
Sbjct 2147 GAATACATAGTGAAACTCTGTCTCAAAAAAGAAAAACAGTGTTGGTTCATTAGTTAGCCTTGGAATATTTATAA 2220
Query 802 -------------------------------------------------------------------------- 801
Sbjct 2221 AACCAAAAATATTTCCTTCACCCTCTGGCTTTAGTTTTTTAATGCCAAGTGCCAGTTTCCTTCCTTTACATCTC 2294
Query 802 -------------------------------------------------------------------------- 801
Sbjct 2295 AGGTGGCCATTAGACAAACACACCTTTTATAAAAGCAAGACATGCCAAAACATAAGAAGACCTTAGTTGTACTT 2368
Query 802 -------------------------------------------------------------------------- 801
Sbjct 2369 TGATCATAGGCATAGATCAGAGTCTAGAACACATTTACTGAATTTTCCAGTTTCTTGTGTTCTGGAACAAGAAC 2442
Query 802 -------------------------------------------------------------------------- 801
Sbjct 2443 TGGACCAGAGACACATGAATGGTGATGGAAGTAGAGACCTTCTGTTAGGAAGAAAGAAAAATATTCCCCAAAAT 2516
Query 802 -------------------------------------------------------------------------- 801
Sbjct 2517 GAGAGTATGTCTAAGGACTAAGAAAGGTCTAAGGCTGAAAAGCCTTGGACCAGAAGAGTCTCTGCTCTTTATAG 2590
Query 802 -------------------------------------------------------------------------- 801
Sbjct 2591 GATCTTTGCATAGCCTCCATCTTTTCTGGCAATTAGGAAGGTAGGGTTTTTTGTTTGTTTGTTTGTTTGTTTGT 2664
Query 802 -------------------------------------------------------------------------- 801
Sbjct 2665 TTGTTTGTTTGTTTGTTTTTTAAAGCATGCTGTTTTGTTATGCATAAATCTGTTGGAAAGGTTTCCAGTCTTCC 2738
Query 802 -------------------------------------------------------------------------- 801
Sbjct 2739 TTTGGGATTGGCTTTTGTTTGTTTGCACTAGGATTTCCTATTCTCCTACCTCACTTTACCCCATCCTAAGAGCT 2812
Query 802 -------------------------------------------------------------------------- 801
Sbjct 2813 GTAGTTCCAAAAATCTTTGTGAGGAGCTAAAGGATGACTATCTATTTTGTATAATTCCCATGTTAATGAGGGAT 2886
Query 802 -------------------------------------------------------------------------- 801
Sbjct 2887 GGAGTCTTTGCCAAAGAGAGTCTTTTCCTATTTTATCTACTGGTTGGAGAGGAGGCTGTAGAGTTTTTGTTTTA 2960
Query 802 -------------------------------------------------------------------------- 801
Sbjct 2961 GGAGTTGCCTTGAATCCTTGTATCATAATGATAAATTGTACATGATTTTTTAAAAAAATGTAAGAATTTGGGCT 3034
Query 802 -------------------------------------------------------------------------- 801
Sbjct 3035 GGAGGAGTGGTTTAGCATTTAAGAGCACTAATTGCTCTTACAGAAGCCTTGAGTCTGATTCTCAGCACCCACAT 3108
Query 802 -------------------------------------------------------------------------- 801
Sbjct 3109 TGTAGCTCACAACCATCCATAACTATAGTTTCTAAGGTTCTAACAACTTCTTATAACATCTGCTGGCACCAGAC 3182
Query 802 -------------------------------------------------------------------------- 801
Sbjct 3183 ATGCACATTGTACACATACATATATAAGAAAAATATCCATATACCTAAAATAAATAATTTTTAAAAATGTCAAT 3256
Query 802 -------------------------------------------------------------------------- 801
Sbjct 3257 GTAAAAATAATATGATTATGTCAGCCATTAGCTCCAGAAAGGACCAGAATCAGGAAAAGCATAGCTATGCTTAT 3330
Query 802 -------------------------------------------------------------------------- 801
Sbjct 3331 GTAAATTATTCTGGATATGGTCCTTTAGGTTGTTAAAACAACAACAACCAAAACAAAATCCACAAACAAATAAA 3404
Query 802 -------------------------------------------------------------------------- 801
Sbjct 3405 CTGATAGTTATGCATTAAAGTTGTGTCAAAATATGGAAAGAACAATTTGTAGGAAAAAAAATTCAGTAGTGGAC 3478
Query 802 -------------------------------------------------------------------------- 801
Sbjct 3479 TAGATTAAAGAGAAGGAAGTATGGGATTGTAACCATTGAGTACCAACAGTGCCAAAAGAGAACATGAAAAGCAT 3552
Query 802 -------------------------------------------------------------------------- 801
Sbjct 3553 AAGGCTATAAGGACTGATCGTTACTTTGCTTTTAAGTAAGAAGTGAAAGCATTCTGTTTGTAGTCTGAAGAGAT 3626
Query 802 -------------------------------------------------------------------------- 801
Sbjct 3627 CCTTTAATTCCTTCAGCTTTTTAGTGGCTTATACTGTAGGTCCTTTTTATTACATACAGAGTAAATATATCTGG 3700
Query 802 -------------------------------------------------------------------------- 801
Sbjct 3701 TCTGATATTGTTGCTTGATGGTATTATAACTCCTATAATTTACATTAGGGAAAGAAAGTTCAACTTCAAGACCT 3774
Query 802 -------------------------------------------------------------------------- 801
Sbjct 3775 TTGGCAAATATAACCACCATTCTAGATGTATCTCAGCCTTAACAGAAATCTTACCTCCATCACTTGTACACTAA 3848
Query 802 -------------------------------------------------------------------------- 801
Sbjct 3849 GAACACTCCTATAAAAGGAATCAGTCCAACAGAAGAATTCTTAGCACAGCATTCAGAGCATTGGATCAACATAG 3922
Query 802 -------------------------------------------------------------------------- 801
Sbjct 3923 AGCATTTTGATGCTATTTTATTTTTGTTACCCCTGACTTTTAAAAAATGAAATAAAATTTTAATATTTCACAGA 3996
Query 802 - 801
Sbjct 3997 A 3997
