Nucleotide Global Alignment
Description
- Query:
- TRCN0000475105
- Subject:
- XR_378263.3
- Aligned Length:
- 4095
- Identities:
- 709
- Gaps:
- 3294
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCCCCTGCCCTTTGGGTAAGGGAGGAGGAAGCCGGAGAGCGCGCTTTGCCTGAGCCGGCCCGAGAGCGGCTGAG 74
Query 1 ------------------------ATGGCTCCGGCCGCGGACCGAGAGGGCTACTGGGGCCCCACGACCTCCAC 50
|||||||||||.|.||||||..|.|||||.||||||||||||||||||||
Sbjct 75 CAGGGTGTGTGGGGCGTCAGCGCGATGGCTCCGGCTGTGGACCGCAAAGGCTATTGGGGCCCCACGACCTCCAC 148
Query 51 GCTGGACTGGTGCGAGGAGAACTACTCCGTGACCTGGTACATCGCCGAGTTCTGGAATACAGTGAGTAACCTGA 124
..||||||||||.|||||||||||....|||||||.||.|.||||.||||||||||||||||||||||||||||
Sbjct 149 ATTGGACTGGTGTGAGGAGAACTATGTGGTGACCTTGTTCGTCGCTGAGTTCTGGAATACAGTGAGTAACCTGA 222
Query 125 TCATGATTATACCTCCAATGTTCGGTGCAATTCAGAGTGTTAGAGACGGTCTGGAAAAACGGTACATTGCTTCT 198
|.|||||.|||||||||||.||.|||||||||||..|..||||||||.|.|||||.||.||||||||||||.||
Sbjct 223 TTATGATCATACCTCCAATTTTTGGTGCAATTCAAGGCATTAGAGACAGACTGGAGAAGCGGTACATTGCTGCT 296
Query 199 TATTTAGCACTCACAGTGGTAGGAATGGGATCCTGGTGCTTCCACATGACTCTGAAATATGAAATGCAGCTATT 272
||.|||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||.||
Sbjct 297 TACTTAGCACTCACAGTGGTAGGAATGGGATCCTGGTGTTTCCACATGACTCTGAAATATGAAATGCAGCTGTT 370
Query 273 GGATGAACTCCCAATGATATACAGCTGTTGCATATTTGTGTACTGCATGTTTGAATGTTTCAAGATCAAGAACT 346
||||||.|||||.|||||.||||||||.|||||||||||.||||||||||||||.||||||||||..||||.||
Sbjct 371 GGATGAGCTCCCCATGATTTACAGCTGCTGCATATTTGTATACTGCATGTTTGAGTGTTTCAAGACAAAGAGCT 444
Query 347 CAGTAAACTACCATCTGCTTTTTACCTTAGTTCTATTCAGTTTAATAGTAACCACAGTTTACCTTAAGGTAAAA 420
||.|||||||||||||.|||||||||.||.||||||.||||||||.||||||.||..|||||||.||.||.|||
Sbjct 445 CAATAAACTACCATCTTCTTTTTACCCTATTTCTATACAGTTTAACAGTAACTACGATTTACCTAAAAGTCAAA 518
Query 421 GAGCCAATATTCCATCAGGTCATGTATGGAATGTTGGTCTTTACATTAGTACTTCGATCTATTTATATTGTTA- 493
||.||.||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||
Sbjct 519 GAACCTATATTCCATCAGGTCATGTATGGAATGTTGGTCTTTACATTAGTACTTCGTTCTATTTATATTGTTAC 592
Query 494 -------------------------------------------------------------------------- 493
Sbjct 593 ATGTGTATCTCCAGAGTCTTGTCTGTACTGAGCATGAATGGACCATGTGCTGATGAAGTTCTTGCTCTCTCCTT 666
Query 494 -------------------------------------------------------------------------- 493
Sbjct 667 CGCGCCCTGCTACCTGGATAACCAAAGACATTCATTTCACCCTACTGAAGAATTTTGCTTTGTACTTCTTCTGA 740
Query 494 ---------------CATGGGTTTATCCATGGCTTAGAGGACTGGGTTATACATCATTGGGTATATTTTTATTG 552
||||||||||||||||||||||||||||.|||||||||||.||...|.|.|||||||||
Sbjct 741 GAACTGAAGATTTGCCATGGGTTTATCCATGGCTTAGAGGACTAGGTTATACATCCTTAACTGTCTTTTTATTG 814
Query 553 GGATTTTTATTTTGGAATATAGATAACATATTTTGTGAGTCACTGAGGAACTTTCGAAAGAAGGTACCACCTAT 626
||.||||||||.|||||||||||||||||.||||||||.||||||||||||||||||||||..||.||.||..|
Sbjct 815 GGGTTTTTATTGTGGAATATAGATAACATCTTTTGTGATTCACTGAGGAACTTTCGAAAGAGAGTGCCCCCCGT 888
Query 627 CATAGGTATTACCACACAATTTCATGCATGGTGGCATATTTTAACTGGCCTTGGTTCCTATCTTCACATCCTTT 700
|.|||||.||||.|||||.|||||||||||||||||||||.||||||||||.|||||.||||||||||||||||
Sbjct 889 CCTAGGTGTTACAACACAGTTTCATGCATGGTGGCATATTCTAACTGGCCTGGGTTCTTATCTTCACATCCTTT 962
Query 701 TCAGTTTGTATACAAGAACACTTTACCTGAGATATAGGCCAAAAGTGAAGTTTCTCTTTGGAATCTGGCCAGTG 774
|||||||.|||||||||||||||||||||||.||.|||||||||||||||||||||||||||||||||||||..
Sbjct 963 TCAGTTTATATACAAGAACACTTTACCTGAGGTACAGGCCAAAAGTGAAGTTTCTCTTTGGAATCTGGCCAGCA 1036
Query 775 ATCCTGTTTGAGCCTCTCAGGAAGCAT----------------------------------------------- 801
.||.|||||||.||||..||||||||.
Sbjct 1037 GTCATGTTTGAACCTCAGAGGAAGCACTGATGAATTATTCTACCAAGAAAATAAAAAACACCTACTGTATGTAG 1110
Query 802 -------------------------------------------------------------------------- 801
Sbjct 1111 TTCTGCCAAGATGGTCAAGAACCCCCCAAAGACTTGTACATTTGAAGACACCATGCCCATCACAAGAGATGAAT 1184
Query 802 -------------------------------------------------------------------------- 801
Sbjct 1185 GACTCAGCCTGAATGACCCAGCCATAGAGAATGGGCAATTGGCCTGTTGGGTATTTAGCTCCTGGCTTTATCTC 1258
Query 802 -------------------------------------------------------------------------- 801
Sbjct 1259 GTTTGCCCTGGACCTAAGATGCTTAGAGAAAAACAGAAAGTGTATATTTATATTCTAGAATGGTGGAGAATTTG 1332
Query 802 -------------------------------------------------------------------------- 801
Sbjct 1333 GGCTTTTCTTAACAGGTTAACAGTTTGTGCTGGTCATTCATGGAAAATTAATATTTTTTTCTTTTTTTACAAGA 1406
Query 802 -------------------------------------------------------------------------- 801
Sbjct 1407 GTTGCATGTTAATTGTATCTTTATTAATTTTTAATTAAATATTGAACAAAGTCATTAAGTACTGGCAAAATACC 1480
Query 802 -------------------------------------------------------------------------- 801
Sbjct 1481 ATATCCAGATGGTTGACTGTGAGCCAGCACTTAGCCGTGTCATCTTTGATTTACATTCTTATATTAATTTCACA 1554
Query 802 -------------------------------------------------------------------------- 801
Sbjct 1555 GATGGCTTTCCAGTAATAAAAAAGAAAAGGTGTGGGATTCTAGGCAGCTCCTTGCTATCTGCCTTGGTGCTAGC 1628
Query 802 -------------------------------------------------------------------------- 801
Sbjct 1629 TGGAGTCTTAGAAGTAAACTCTGACCTGCCAGTGAGTGGGCTCTGTTCTCATCACATTCAAGATTTTGTCTTGG 1702
Query 802 -------------------------------------------------------------------------- 801
Sbjct 1703 ACTCTGTGGCCCACAGCCAATCAAAGGGGTGGGCCATCCAACACCCCTTCAGAAGCTTTTCCAGAACACCCGTG 1776
Query 802 -------------------------------------------------------------------------- 801
Sbjct 1777 GAATGTAGTCCTCTCACCAGTTAGAGGCTGTTGTTTTGCTTTCTTTGATCTTCAAATTATTATTACTATTGTGT 1850
Query 802 -------------------------------------------------------------------------- 801
Sbjct 1851 CTAGCAAATTTAACTGGTAATCTGTAAGACAACACAGTTTAATTGACTTTATCAGGGAAAGTTGTCAGTTTTTT 1924
Query 802 -------------------------------------------------------------------------- 801
Sbjct 1925 AATTTTTCCATTATGCAGTATGCATAGTGAAGCAAATAGTTCTAATTCGGATTTGAATGTATACGAAATTGAAT 1998
Query 802 -------------------------------------------------------------------------- 801
Sbjct 1999 TAATAATCACAAACAGTAAATGAAAGATCATATGTTATATCTAAGCTATGGCCCCAAAAGAAAAGTGGGGTTTT 2072
Query 802 -------------------------------------------------------------------------- 801
Sbjct 2073 TTTCCCCATGTGAAATTGGTTTTTAAAAAATTCTCATATTTTCAATATTCATTAACAAGCTTTAGCCTGGCAGG 2146
Query 802 -------------------------------------------------------------------------- 801
Sbjct 2147 GTGATGCATGTCTTTAATCACAGCACTTGAAAGGCAGAGATAGGCAGATCTCTGTGATTTTAAGGCCAGCCTGG 2220
Query 802 -------------------------------------------------------------------------- 801
Sbjct 2221 CCTATATAGTTCCAGGATAGTCAGGAATACATAGTGAAACTCTGTCTCAAAAAAGAAAAACAGTGTTGGTTCAT 2294
Query 802 -------------------------------------------------------------------------- 801
Sbjct 2295 TAGTTAGCCTTGGAATATTTATAAAACCAAAAATATTTCCTTCACCCTCTGGCTTTAGTTTTTTAATGCCAAGT 2368
Query 802 -------------------------------------------------------------------------- 801
Sbjct 2369 GCCAGTTTCCTTCCTTTACATCTCAGGTGGCCATTAGACAAACACACCTTTTATAAAAGCAAGACATGCCAAAA 2442
Query 802 -------------------------------------------------------------------------- 801
Sbjct 2443 CATAAGAAGACCTTAGTTGTACTTTGATCATAGGCATAGATCAGAGTCTAGAACACATTTACTGAATTTTCCAG 2516
Query 802 -------------------------------------------------------------------------- 801
Sbjct 2517 TTTCTTGTGTTCTGGAACAAGAACTGGACCAGAGACACATGAATGGTGATGGAAGTAGAGACCTTCTGTTAGGA 2590
Query 802 -------------------------------------------------------------------------- 801
Sbjct 2591 AGAAAGAAAAATATTCCCCAAAATGAGAGTATGTCTAAGGACTAAGAAAGGTCTAAGGCTGAAAAGCCTTGGAC 2664
Query 802 -------------------------------------------------------------------------- 801
Sbjct 2665 CAGAAGAGTCTCTGCTCTTTATAGGATCTTTGCATAGCCTCCATCTTTTCTGGCAATTAGGAAGGTAGGGTTTT 2738
Query 802 -------------------------------------------------------------------------- 801
Sbjct 2739 TTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTTAAAGCATGCTGTTTTGTTATGCATAAATC 2812
Query 802 -------------------------------------------------------------------------- 801
Sbjct 2813 TGTTGGAAAGGTTTCCAGTCTTCCTTTGGGATTGGCTTTTGTTTGTTTGCACTAGGATTTCCTATTCTCCTACC 2886
Query 802 -------------------------------------------------------------------------- 801
Sbjct 2887 TCACTTTACCCCATCCTAAGAGCTGTAGTTCCAAAAATCTTTGTGAGGAGCTAAAGGATGACTATCTATTTTGT 2960
Query 802 -------------------------------------------------------------------------- 801
Sbjct 2961 ATAATTCCCATGTTAATGAGGGATGGAGTCTTTGCCAAAGAGAGTCTTTTCCTATTTTATCTACTGGTTGGAGA 3034
Query 802 -------------------------------------------------------------------------- 801
Sbjct 3035 GGAGGCTGTAGAGTTTTTGTTTTAGGAGTTGCCTTGAATCCTTGTATCATAATGATAAATTGTACATGATTTTT 3108
Query 802 -------------------------------------------------------------------------- 801
Sbjct 3109 TAAAAAAATGTAAGAATTTGGGCTGGAGGAGTGGTTTAGCATTTAAGAGCACTAATTGCTCTTACAGAAGCCTT 3182
Query 802 -------------------------------------------------------------------------- 801
Sbjct 3183 GAGTCTGATTCTCAGCACCCACATTGTAGCTCACAACCATCCATAACTATAGTTTCTAAGGTTCTAACAACTTC 3256
Query 802 -------------------------------------------------------------------------- 801
Sbjct 3257 TTATAACATCTGCTGGCACCAGACATGCACATTGTACACATACATATATAAGAAAAATATCCATATACCTAAAA 3330
Query 802 -------------------------------------------------------------------------- 801
Sbjct 3331 TAAATAATTTTTAAAAATGTCAATGTAAAAATAATATGATTATGTCAGCCATTAGCTCCAGAAAGGACCAGAAT 3404
Query 802 -------------------------------------------------------------------------- 801
Sbjct 3405 CAGGAAAAGCATAGCTATGCTTATGTAAATTATTCTGGATATGGTCCTTTAGGTTGTTAAAACAACAACAACCA 3478
Query 802 -------------------------------------------------------------------------- 801
Sbjct 3479 AAACAAAATCCACAAACAAATAAACTGATAGTTATGCATTAAAGTTGTGTCAAAATATGGAAAGAACAATTTGT 3552
Query 802 -------------------------------------------------------------------------- 801
Sbjct 3553 AGGAAAAAAAATTCAGTAGTGGACTAGATTAAAGAGAAGGAAGTATGGGATTGTAACCATTGAGTACCAACAGT 3626
Query 802 -------------------------------------------------------------------------- 801
Sbjct 3627 GCCAAAAGAGAACATGAAAAGCATAAGGCTATAAGGACTGATCGTTACTTTGCTTTTAAGTAAGAAGTGAAAGC 3700
Query 802 -------------------------------------------------------------------------- 801
Sbjct 3701 ATTCTGTTTGTAGTCTGAAGAGATCCTTTAATTCCTTCAGCTTTTTAGTGGCTTATACTGTAGGTCCTTTTTAT 3774
Query 802 -------------------------------------------------------------------------- 801
Sbjct 3775 TACATACAGAGTAAATATATCTGGTCTGATATTGTTGCTTGATGGTATTATAACTCCTATAATTTACATTAGGG 3848
Query 802 -------------------------------------------------------------------------- 801
Sbjct 3849 AAAGAAAGTTCAACTTCAAGACCTTTGGCAAATATAACCACCATTCTAGATGTATCTCAGCCTTAACAGAAATC 3922
Query 802 -------------------------------------------------------------------------- 801
Sbjct 3923 TTACCTCCATCACTTGTACACTAAGAACACTCCTATAAAAGGAATCAGTCCAACAGAAGAATTCTTAGCACAGC 3996
Query 802 -------------------------------------------------------------------------- 801
Sbjct 3997 ATTCAGAGCATTGGATCAACATAGAGCATTTTGATGCTATTTTATTTTTGTTACCCCTGACTTTTAAAAAATGA 4070
Query 802 ------------------------- 801
Sbjct 4071 AATAAAATTTTAATATTTCACAGAA 4095
