Nucleotide Global Alignment

Description

Query:
TRCN0000475115
Subject:
NM_144536.3
Aligned Length:
1752
Identities:
1499
Gaps:
33

Alignment

Query    1  ATGCCTTCTGCATCCTGTGATACACTACTGGATGACATCGAAGATATCGTGTCTCAGGAAGATTCAAAACCACA  74
            |||||||||||.||.||||||..|||.|||||||||||.|||||||||.|.||.||||||||||||||.|||||
Sbjct    1  ATGCCTTCTGCGTCTTGTGATGTACTGCTGGATGACATAGAAGATATCATATCACAGGAAGATTCAAAGCCACA  74

Query   75  AGATAGGCATTTTGTAAGAAAGGATGTTGTCCCGAAGGTACGAAGGCGAAATACCCAAAAATATTTGCAAGAGG  148
            .||.||.||.||...|||||||.||||..|.||.||.|||||||||||.|||||||||||||||||||||   |
Sbjct   75  GGACAGACAGTTCTCAAGAAAGCATGTGTTTCCTAAAGTACGAAGGCGGAATACCCAAAAATATTTGCAA---G  145

Query  149  AAGAAAACAGTCCACCAAGTGACAGCACTATTCCAGGCATACAGAAAATTTGGATACGAACATGGGGTTGTTCT  222
            ||||...|||.||||||||||||||||||||||||||||||||||||||||||||.|||||||||||.||.||.
Sbjct  146  AAGAGCCCAGGCCACCAAGTGACAGCACTATTCCAGGCATACAGAAAATTTGGATCCGAACATGGGGCTGCTCA  219

Query  223  CATAATAATTCAGATGGAGAATATATGGCTGGACAGCTAGCTGCTTATGGCTATAAAATTACAGAAAATGCATC  296
            |||||||||||.|||||||||||.||||||||||||||.|||||.||||||||||||||||||||.||||||||
Sbjct  220  CATAATAATTCGGATGGAGAATACATGGCTGGACAGCTTGCTGCCTATGGCTATAAAATTACAGAGAATGCATC  293

Query  297  CGATGCAGATTTATGGCTCCTGAACAGTTGCACTGTAAAAAACCCAGCTGAAGACCACTTTAGAAACTCAATTA  370
            .|||||||||.|.|||||||||||||||||.|||||.|||||.|||||||||||||||||||||||||||||.|
Sbjct  294  AGATGCAGATCTGTGGCTCCTGAACAGTTGTACTGTGAAAAATCCAGCTGAAGACCACTTTAGAAACTCAATCA  367

Query  371  AAAAAGCTCAAGAGGAGAACAAGAAAATCGTACTGGCTGGATGCGTTCCTCAAGCCCAGCCTCGCCAGGACTAC  444
            |||||||||||||.|||||.||||||.|.||.||.|||||.||.|||||.||||||||||||||.|||||||||
Sbjct  368  AAAAAGCTCAAGAAGAGAATAAGAAAGTTGTCCTCGCTGGCTGTGTTCCCCAAGCCCAGCCTCGTCAGGACTAC  441

Query  445  CTTAAGGGACTGAGTATCATTGGGGTTCAGCAGATAGATCGTGTGGTAGAAGTTGTGGAGGAGACAATTAAAGG  518
            ||.||.||||||||.|||||.|||||||||||||||||||||||||||||||||||||||||.|||||.|||||
Sbjct  442  CTCAAAGGACTGAGCATCATCGGGGTTCAGCAGATAGATCGTGTGGTAGAAGTTGTGGAGGAAACAATAAAAGG  515

Query  519  TCACTCTGTGAGACTGCTGGGTCAGAAAAAGGATAATGGAAGGCGGCTTGGG-GGAGCACGATTGGATTTGCCG  591
            ||||||.|||||.||.|||||.|||||.||.||.||.||.|.|| ||||||| |||||.|||.|||||||||||
Sbjct  516  TCACTCAGTGAGGCTCCTGGGCCAGAAGAAAGACAACGGGAAGC-GCTTGGGTGGAGCTCGACTGGATTTGCCG  588

Query  592  AAGATTAGGAAGAATCCACTGATAGAAATCATTTCCATCAATACCGGGTGTCTCAATGCTTGTACCTACTGCAA  665
            |||||.||.||||||||.|||||||||||||||||||||||.||.|||||||||||||||||||||||||||||
Sbjct  589  AAGATCAGAAAGAATCCGCTGATAGAAATCATTTCCATCAACACGGGGTGTCTCAATGCTTGTACCTACTGCAA  662

Query  666  AACTAAACACGCCAGAGGAAATTTGGCCAGTTATCCAATTGATGAACTAGTAGATAGAGCCAAACAATCTTTTC  739
            |||||||||||||||||||||..|||||||.|||||.||||||||.||.||.||.||||||||.|||||.||||
Sbjct  663  AACTAAACACGCCAGAGGAAACCTGGCCAGCTATCCCATTGATGAGCTTGTGGAGAGAGCCAAGCAATCCTTTC  736

Query  740  AAGAGGGTGTTTGTGAGATATGGTTGACCAGTGAAGACACGGGGGCTTATGGCAGAGATATTGGCACCAATCTC  813
            |||||||||||||||||||||||.|||||||.||.|||||.|||||.|||||||||||.||||||||..|||||
Sbjct  737  AAGAGGGTGTTTGTGAGATATGGCTGACCAGCGAGGACACCGGGGCCTATGGCAGAGACATTGGCACAGATCTC  810

Query  814  CCCACACTCCTGTGGAAACTGGTTGAAGTGATTCCTGAGGGAGCAATGCTGAGGCTTGGCATGACAAATCCGCC  887
            |||||||||||||||||..||||.||||||||||||||||||||.|||||||||||.||||||||||||||.||
Sbjct  811  CCCACACTCCTGTGGAAGTTGGTGGAAGTGATTCCTGAGGGAGCCATGCTGAGGCTGGGCATGACAAATCCACC  884

Query  888  CTATATTTTAGAGCATCTGGAGGAAATGGCAAAAATCCTTAATCACCCCAGAGTCTACGCTTTTCTGCACATAC  961
            .|||||||||||.||||||||||||||||||||||||||.||.||.|||||||||||||||||.||.|||||.|
Sbjct  885  ATATATTTTAGAACATCTGGAGGAAATGGCAAAAATCCTCAACCATCCCAGAGTCTACGCTTTCCTCCACATCC  958

Query  962  CAGTCCAGTCTGCCTCCGACAGCGTACTCATGGAAATGAAAAGAGAATACTGTGTGGCTGACTTCAAAAGAGTA  1035
            ||||.|||||.|||||.|||||.||.||||||||.|||||.|||||.|||||.|||||.||||||||||||||.
Sbjct  959  CAGTGCAGTCCGCCTCTGACAGTGTGCTCATGGACATGAAGAGAGAGTACTGCGTGGCCGACTTCAAAAGAGTC  1032

Query 1036  GTGGATTTTCTGAAAGAGAAAGTTCCTGGAATAACTATTGCTACAGATATTATCTGTGGTTTTCCTGGAGAAAC  1109
            |||||||||||.||.|||||.||||||||||||||.||||||||.|||||||||||||||||||||||||||||
Sbjct 1033  GTGGATTTTCTCAAGGAGAAGGTTCCTGGAATAACGATTGCTACGGATATTATCTGTGGTTTTCCTGGAGAAAC  1106

Query 1110  AGATCAGGATTTTCAAGAAACAGTGAAACTTGTTGAAGAGTACAAATTCCCAAGCCTGTTTATTAACCAATTTT  1183
            .|||||||||||||||||||||||||||||||||||||||||||||||.||||||||.||.||.|||||.||.|
Sbjct 1107  CGATCAGGATTTTCAAGAAACAGTGAAACTTGTTGAAGAGTACAAATTTCCAAGCCTCTTCATCAACCAGTTCT  1180

Query 1184  ACCCAAGACCAGGAACTCCTGCTGCAAAAATGGAACAAGTTCCAGCACAAGTGAAAAAGCAAAGGACAAAAGAT  1257
            |.||||||||.||||||||||||||||||...||.||.|||||||||||.||||||||.|||||||||||||||
Sbjct 1181  ATCCAAGACCCGGAACTCCTGCTGCAAAAGCCGAGCAGGTTCCAGCACATGTGAAAAAACAAAGGACAAAAGAT  1254

Query 1258  CTTTCTCGGGTGTTTCATTCTTACAGTCCATATGATCACAAGATTGGTGAAAGACAACAAGTGTTAGTAACAGA  1331
            ||||||||||||||||||||.||||.||||||.||||||||||||||.|||||||||||||||.||||.||.||
Sbjct 1255  CTTTCTCGGGTGTTTCATTCCTACAATCCATACGATCACAAGATTGGCGAAAGACAACAAGTGCTAGTCACTGA  1328

Query 1332  AGAATCTTTTGATTCCAAGTTTTATGTTGCACACAATCAATTCTATGAGCAGGTTTTAGTGCCAAAGAACCCTG  1405
            |||.||||||||.|||||||||||||||||.||.||.|.|||||||||||||||||||||.|||||||||||||
Sbjct 1329  AGAGTCTTTTGACTCCAAGTTTTATGTTGCTCATAACCGATTCTATGAGCAGGTTTTAGTACCAAAGAACCCTG  1402

Query 1406  CGTTCATGGGGAAGATGGTTGAAGTGGACATCTATGAATCAGGCAAACATTTTATGAAAGGGCAGCCAGTATCT  1479
            |.|||||||||||.|||||||||||.|||||.||.||||||||.||.||.|||.|||||||.|||||||||||.
Sbjct 1403  CATTCATGGGGAAAATGGTTGAAGTCGACATTTACGAATCAGGAAAGCACTTTTTGAAAGGACAGCCAGTATCA  1476

Query 1480  GATGCCAAAGTGTACACGCCCTCCATCAGCAAACCGCTAGCAAAGGGAGAAGTCTCGGGTTTGACAAAGGACTT  1553
            ||..|||.||||||.||.||.|||||||||||.||.||.||.||||||||||||||.||||||||||||||.||
Sbjct 1477  GAAACCAGAGTGTATACACCATCCATCAGCAAGCCACTGGCCAAGGGAGAAGTCTCAGGTTTGACAAAGGAATT  1550

Query 1554  CAGAAATGGGCTTGGGAACCAGC------TGAGTTCAGGATCCCACACCTCTGCTGCATCTCAGTGTGACTCAG  1621
            |||||||.||||||||||.||.|      ..|.|||||      ||||||.|.|||||.|||||..||.|||.|
Sbjct 1551  CAGAAATAGGCTTGGGAATCATCCAAACGGAACTTCAG------ACACCTGTCCTGCAACTCAGCATGGCTCTG  1618

Query 1622  CGAGTTCCAGAATGGTGCTGCCCATG-CCAAGGCTACATCAAGACTGTGCGCTGAGGATGTCCGTGGGCTTGGC  1694
            ||..|||||||||||||||||..||| ||       ||..|.|||||.||.||||.|.||.|....|||.||||
Sbjct 1619  CGTATTCCAGAATGGTGCTGCAGATGTCC-------CAGTATGACTGCGCACTGAAGGTGGCTACAGGCCTGGC  1685

Query 1695  TCTGCTGGGTCTTCTTTTTGCTTTTTTTGTCAAGGTC------TATAAT-  1737
            |||.||.|.|| ||.||||||.|||.|.|.||...||      ||.||| 
Sbjct 1686  TCTCCTCGCTC-TCCTTTTGCATTTCTGGCCAGACTCTTTGCTTACAATG  1734

GPP Web Portal Terms of Service

Effective Date: December 8, 2025
By using this site, you agree to our terms and conditions below.

Overview of Terms

The data made available on this website were generated for research purposes and are not intended for clinical or commercial uses. Commercial use (or other use for profit-making purposes) of the GPP Web Portal and its tools, is not permitted under these terms and may require a separate license agreement from Broad or its contributors. For more information, please contact partnering@broadinstitute.org.

The original data may be subject to rights claimed by third parties, including but not limited to, patent, copyright, other intellectual property rights, biodiversity-related access and benefit-sharing rights. It is the responsibility of users of Broad Institute services to ensure that their use of the data does not infringe any of the rights of such third parties.

Any questions or comments concerning these Terms of Use can be addressed to: legal@broadinstitute.org.

By accessing and viewing this GPP Web Portal, you agree to the following terms and conditions:

Attribution

You agree to acknowledge the Broad Institute (e.g., in publications, services or products) for any of your use of its online services, databases or software in accordance with good scientific practice. You agree to use the acknowledgment wording provided for the relevant tools as indicated on the FAQ for each tool.

Updating the Terms of Use

We reserve the right to update these Terms of Use at any time. When alterations are inevitable, we will attempt to give reasonable notice of any changes by placing a notice on our website, but you may wish to check each time you use the website. The date of the most recent revision will appear on this, the "GPP Web Portal Terms of Use" page. If you do not agree to these changes, please do not continue to use our online services. We will also make available an archived copy of the previous Terms of Use for comparison.

Indemnification and Disclaimer of Warranties

You are using this GPP Web Portal at your own risk, and you hereby agree to hold Broad and its contributors and their trustees, directors, officers, employees, and affiliated investigators harmless for any third party claims which may arise from your use of the GPP Web Portal, the tools available therein, or any portion thereof. Further, you agree to indemnify Broad, its contributors, and its and their trustees, directors, officers, employees, affiliated investigators, students, and affiliates for any loss, costs, claims, damages, or other liabilities arising from any unpermitted commercial or profit-making use you make of the GPP Web Portal. The GPP Web Portal is a research tool and is provided "as is". Broad does not represent that the GPP Web Portal is free of errors or bugs or suitable for any particular tasks.

ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, NONINFRINGEMENT, OR THE ABSENCE OF LATENT OR OTHER DEFECTS ARE DISCLAIMED. IN NO EVENT SHALL BROAD OR ITS CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THE GPP WEB PORTAL, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

Governing Law

The terms and conditions herein shall be construed, governed, interpreted, and applied in accordance with the internal laws of the Commonwealth of Massachusetts, U.S.A. Furthermore, by accessing, downloading, or using the Database, You consent to the personal jurisdiction of, and venue in, the state and federal courts within Massachusetts with respect to Your download or use of the Database.