Nucleotide Global Alignment
Description
- Query:
- TRCN0000475115
- Subject:
- XM_006516762.3
- Aligned Length:
- 1758
- Identities:
- 864
- Gaps:
- 759
Alignment
Query 1 ATGCCTTCTGCATCCTGTGATACACTACTGGATGACATCGAAGATATCGTGTCTCAGGAAGATTCAAAACCACA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 AGATAGGCATTTTGTAAGAAAGGATGTTGTCCCGAAGGTACGAAGGCGAAATACCCAAAAATATTTGCAAGAGG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 AAGAAAACAGTCCACCAAGTGACAGCACTATTCCAGGCATACAGAAAATTTGGATACGAACATGGGGTTGTTCT 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 CATAATAATTCAGATGGAGAATATATGGCTGGACAGCTAGCTGCTTATGGCTATAAAATTACAGAAAATGCATC 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 CGATGCAGATTTATGGCTCCTGAACAGTTGCACTGTAAAAAACCCAGCTGAAGACCACTTTAGAAACTCAATTA 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 AAAAAGCTCAAGAGGAGAACAAGAAAATCGTACTGGCTGGATGCGTTCCTCAAGCCCAGCCTCGCCAGGACTAC 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 CTTAAGGGACTGAGTATCATTGGGGTTCAGCAGATAGATCGTGTGGTAGAAGTTGTGGAGGAGACAATTAAAGG 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 TCACTCTGTGAGACTGCTGGGTCAGAAAAAGGATAATGGAAGGCGGCTTGGGGGAGCACGATTGGATTTGCCGA 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 AGATTAGGAAGAATCCACTGATAGAAATCATTTCCATCAATACCGGGTGTCTCAATGCTTGTACCTACTGCAAA 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 ACTAAACACGCCAGAGGAAATTTGGCCAGTTATCCAATTGATGAACTAGTAG-------ATAGAGCCAAACAAT 733
||| || ||.| ||.||||
Sbjct 1 ----------------------------------------ATG--CT-GTGGTGTTCCTATGGAGC-------- 23
Query 734 CTTTTCAAGAGGGTGTTTGTGAGATATGGTTGACCAGTGAAGACACGGGGGCTTATGGCAGAGATATTGGCACC 807
||||||||||||||||||||||.|||||||.||.|||||.|||||.|||||||||||.||||||||.
Sbjct 24 -------AGAGGGTGTTTGTGAGATATGGCTGACCAGCGAGGACACCGGGGCCTATGGCAGAGACATTGGCACA 90
Query 808 AATCTCCCCACACTCCTGTGGAAACTGGTTGAAGTGATTCCTGAGGGAGCAATGCTGAGGCTTGGCATGACAAA 881
.||||||||||||||||||||||..||||.||||||||||||||||||||.|||||||||||.|||||||||||
Sbjct 91 GATCTCCCCACACTCCTGTGGAAGTTGGTGGAAGTGATTCCTGAGGGAGCCATGCTGAGGCTGGGCATGACAAA 164
Query 882 TCCGCCCTATATTTTAGAGCATCTGGAGGAAATGGCAAAAATCCTTAATCACCCCAGAGTCTACGCTTTTCTGC 955
|||.||.|||||||||||.||||||||||||||||||||||||||.||.||.|||||||||||||||||.||.|
Sbjct 165 TCCACCATATATTTTAGAACATCTGGAGGAAATGGCAAAAATCCTCAACCATCCCAGAGTCTACGCTTTCCTCC 238
Query 956 ACATACCAGTCCAGTCTGCCTCCGACAGCGTACTCATGGAAATGAAAAGAGAATACTGTGTGGCTGACTTCAAA 1029
||||.|||||.|||||.|||||.|||||.||.||||||||.|||||.|||||.|||||.|||||.|||||||||
Sbjct 239 ACATCCCAGTGCAGTCCGCCTCTGACAGTGTGCTCATGGACATGAAGAGAGAGTACTGCGTGGCCGACTTCAAA 312
Query 1030 AGAGTAGTGGATTTTCTGAAAGAGAAAGTTCCTGGAATAACTATTGCTACAGATATTATCTGTGGTTTTCCTGG 1103
|||||.|||||||||||.||.|||||.||||||||||||||.||||||||.|||||||||||||||||||||||
Sbjct 313 AGAGTCGTGGATTTTCTCAAGGAGAAGGTTCCTGGAATAACGATTGCTACGGATATTATCTGTGGTTTTCCTGG 386
Query 1104 AGAAACAGATCAGGATTTTCAAGAAACAGTGAAACTTGTTGAAGAGTACAAATTCCCAAGCCTGTTTATTAACC 1177
||||||.|||||||||||||||||||||||||||||||||||||||||||||||.||||||||.||.||.||||
Sbjct 387 AGAAACCGATCAGGATTTTCAAGAAACAGTGAAACTTGTTGAAGAGTACAAATTTCCAAGCCTCTTCATCAACC 460
Query 1178 AATTTTACCCAAGACCAGGAACTCCTGCTGCAAAAATGGAACAAGTTCCAGCACAAGTGAAAAAGCAAAGGACA 1251
|.||.||.||||||||.||||||||||||||||||...||.||.|||||||||||.||||||||.|||||||||
Sbjct 461 AGTTCTATCCAAGACCCGGAACTCCTGCTGCAAAAGCCGAGCAGGTTCCAGCACATGTGAAAAAACAAAGGACA 534
Query 1252 AAAGATCTTTCTCGGGTGTTTCATTCTTACAGTCCATATGATCACAAGATTGGTGAAAGACAACAAGTGTTAGT 1325
||||||||||||||||||||||||||.||||.||||||.||||||||||||||.|||||||||||||||.||||
Sbjct 535 AAAGATCTTTCTCGGGTGTTTCATTCCTACAATCCATACGATCACAAGATTGGCGAAAGACAACAAGTGCTAGT 608
Query 1326 AACAGAAGAATCTTTTGATTCCAAGTTTTATGTTGCACACAATCAATTCTATGAGCAGGTTTTAGTGCCAAAGA 1399
.||.|||||.||||||||.|||||||||||||||||.||.||.|.|||||||||||||||||||||.|||||||
Sbjct 609 CACTGAAGAGTCTTTTGACTCCAAGTTTTATGTTGCTCATAACCGATTCTATGAGCAGGTTTTAGTACCAAAGA 682
Query 1400 ACCCTGCGTTCATGGGGAAGATGGTTGAAGTGGACATCTATGAATCAGGCAAACATTTTATGAAAGGGCAGCCA 1473
|||||||.|||||||||||.|||||||||||.|||||.||.||||||||.||.||.|||.|||||||.||||||
Sbjct 683 ACCCTGCATTCATGGGGAAAATGGTTGAAGTCGACATTTACGAATCAGGAAAGCACTTTTTGAAAGGACAGCCA 756
Query 1474 GTATCTGATGCCAAAGTGTACACGCCCTCCATCAGCAAACCGCTAGCAAAGGGAGAAGTCTCGGGTTTGACAAA 1547
|||||.||..|||.||||||.||.||.|||||||||||.||.||.||.||||||||||||||.|||||||||||
Sbjct 757 GTATCAGAAACCAGAGTGTATACACCATCCATCAGCAAGCCACTGGCCAAGGGAGAAGTCTCAGGTTTGACAAA 830
Query 1548 GGACTTCAGAAATGGGCTTGGGAACCAGC------TGAGTTCAGGATCCCACACCTCTGCTGCATCTCAGTGTG 1615
|||.|||||||||.||||||||||.||.| ..|.||||| ||||||.|.|||||.|||||..||
Sbjct 831 GGAATTCAGAAATAGGCTTGGGAATCATCCAAACGGAACTTCAG------ACACCTGTCCTGCAACTCAGCATG 898
Query 1616 ACTCAGCGAGTTCCAGAATGGTGCTGCCCATG-CCAAGGCTACATCAAGACTGTGCGCTGAGGATGTCCGTGGG 1688
.|||.|||..|||||||||||||||||..||| || ||..|.|||||.||.||||.|.||.|....||
Sbjct 899 GCTCTGCGTATTCCAGAATGGTGCTGCAGATGTCC-------CAGTATGACTGCGCACTGAAGGTGGCTACAGG 965
Query 1689 CTTGGCTCTGCTGGGTCTTCTTTTTGCTTTTTTTGTCAAGGTC------TATAAT- 1737
|.|||||||.||.|.|| ||.||||||.|||.|.|.||...|| ||.|||
Sbjct 966 CCTGGCTCTCCTCGCTC-TCCTTTTGCATTTCTGGCCAGACTCTTTGCTTACAATG 1020
