Nucleotide Global Alignment
Description
- Query:
- TRCN0000475115
- Subject:
- XR_001743500.1
- Aligned Length:
- 3272
- Identities:
- 1570
- Gaps:
- 1702
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AAATAAACGTGGCGGGACGTATGTGTCATGGCGCTCTCCATCTAAAGTCTGTGCAGCTTCCGGAGAGTGGCGGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTGATTTTCTCACTTTGGACTGGTTTTTACTTCCCGACTTCTGGACTCATCTTTCAAGAGGACTTTAGACTAAT 148
Query 1 -------------------ATGCCTTCTGCATCCTGTGATACACTACTGGATGACATCGAAGATATCGTGTCTC 55
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TGCAGATAATTAAGAGAATATGCCTTCTGCATCCTGTGATACACTACTGGATGACATCGAAGATATCGTGTCTC 222
Query 56 AGGAAGATTCAAAACCACAAGATAGGCATTTTGTAAGAAAGGATGTTGTCCCGAAGGTACGAAGGCGAAATACC 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AGGAAGATTCAAAACCACAAGATAGGCATTTTGTAAGAAAGGATGTTGTCCCGAAGGTACGAAGGCGAAATACC 296
Query 130 CAAAAATATTTGCAAGAGGAAGAAAACAGTCCACCAAGTGACAGCACTATTCCAGGCATACAGAAAATTTGGAT 203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CAAAAATATTTGCAAGAGGAAGAAAACAGTCCACCAAGTGACAGCACTATTCCAGGCATACAGAAAATTTGGAT 370
Query 204 ACGAACATGGGGTTGTTCTCATAATAATTCAGATGGAGAATATATGGCTGGACAGCTAGCTGCTTATGGCTATA 277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ACGAACATGGGGTTGTTCTCATAATAATTCAGATGGAGAATATATGGCTGGACAGCTAGCTGCTTATGGCTATA 444
Query 278 AAATTACAGAAAATGCATCCGATGCAGATTTATGGCTCCTGAACAGTTGCACTGTAAAAAACCCAGCTGAAGAC 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AAATTACAGAAAATGCATCCGATGCAGATTTATGGCTCCTGAACAGTTGCACTGTAAAAAACCCAGCTGAAGAC 518
Query 352 CACTTTAGAAACTCAATTAAAAAAGCTCAAGAGGAGAACAAGAAAATCGTACTGGCTGGATGCGTTCCTCAAGC 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CACTTTAGAAACTCAATTAAAAAAGCTCAAGAGGAGAACAAGAAAATCGTACTGGCTGGATGCGTTCCTCAAGC 592
Query 426 CCAGCCTCGCCAGGACTACCTTAAGGGACTGAGTATCATTGGGGTTCAGCAGATAGATCGTGTGGTAGAAGTTG 499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CCAGCCTCGCCAGGACTACCTTAAGGGACTGAGTATCATTGGGGTTCAGCAGATAGATCGTGTGGTAGAAGTTG 666
Query 500 TGGAGGAGACAATTAAAGGTCACTCTGTGAGACTGCTGGGTCAGAAAAAGGATAATGGAAGGCGGCTTGGGGGA 573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TGGAGGAGACAATTAAAGGTCACTCTGTGAGACTGCTGGGTCAGAAAAAGGATAATGGAAGGCGGCTTGGGGGA 740
Query 574 GCACGATTGGATTTGCCGAAGATTAGGAAGAATCCACTGATAGAAATCATTTCCATCAATACCGGGTGTCTCAA 647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GCACGATTGGATTTGCCGAAGATTAGGAAGAATCCACTGATAGAAATCATTTCCATCAATACCGGGTGTCTCAA 814
Query 648 TGCTTGTACCTACTGCAAAACTAAACACGCCAGAGGAAATTTGGCCAGTTATCCAATTGATGAACTAGTAGATA 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TGCTTGTACCTACTGCAAAACTAAACACGCCAGAGGAAATTTGGCCAGTTATCCAATTGATGAACTAGTAGATA 888
Query 722 GAGCCAAACAATCTTTTCAAGAGGGTGTTTGTGAGATATGGTTGACCAGTGAAGACACGGGGGCTTATGGCAGA 795
|||||||||||||||||||
Sbjct 889 GAGCCAAACAATCTTTTCA------------------------------------------------------- 907
Query 796 GATATTGGCACCAATCTCCCCACACTCCTGTGGAAACTGGTTGAAGTGATTCCTGAGGGAGCAATGCTGAGGCT 869
Sbjct 908 -------------------------------------------------------------------------- 907
Query 870 TGGCATGACAAATCCGCCCTATATTTTAGAGCATCTGGAGGAAATGGCAAAAATCCTTAATCACCCCAGAGTCT 943
||||||||||||||||||||||||||||||||||||
Sbjct 908 --------------------------------------AGGAAATGGCAAAAATCCTTAATCACCCCAGAGTCT 943
Query 944 ACGCTTTTCTGCACATACCAGTCCAGTCTGCCTCCGACAGCGTACTCATGGAAATGAAAAGAGAATACTGTGTG 1017
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 944 ACGCTTTTCTGCACATACCAGTCCAGTCTGCCTCCGACAGCGTACTCATGGAAATGAAAAGAGAATACTGTGTG 1017
Query 1018 GCTGACTTCAAAAGAGTAGTGGATTTTCTGAAAGAGAAAGTTCCTGGAATAACTATTGCTACAGATATTATCTG 1091
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1018 GCTGACTTCAAAAGAGTAGTGGATTTTCTGAAAGAGAAAGTTCCTGGAATAACTATTGCTACAGATATTATCTG 1091
Query 1092 TGGTTTTCCTGGAGAAACAGATCAGGATTTTCAAGAAACAGTGAAACTTGTTGAAGAGTACAAATTCCCAAGCC 1165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1092 TGGTTTTCCTGGAGAAACAGATCAGGATTTTCAAGAAACAGTGAAACTTGTTGAAGAGTACAAATTCCCAAGCC 1165
Query 1166 TGTTTATTAACCAATTTTACCCAAGACCAGGAACTCCTGCTGCAAAAATGGAACAAGTTCCAGCACAAGTGAAA 1239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1166 TGTTTATTAACCAATTTTACCCAAGACCAGGAACTCCTGCTGCAAAAATGGAACAAGTTCCAGCACAAGTGAAA 1239
Query 1240 AAGCAAAGGACAAAAGATCTTTCTCGGGTGTTTCATTCTTACAGTCCATATGATCACAAGATTGGTGAAAGACA 1313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1240 AAGCAAAGGACAAAAGATCTTTCTCGGGTGTTTCATTCTTACAGTCCATATGATCACAAGATTGGTGAAAGACA 1313
Query 1314 ACAAGTGTTAGTAACAGAAGAATCTTTTGATTCCAAGTTTTATGTTGCACACAATCAATTCTATGAGCAGGTTT 1387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1314 ACAAGTGTTAGTAACAGAAGAATCTTTTGATTCCAAGTTTTATGTTGCACACAATCAATTCTATGAGCAGGTTT 1387
Query 1388 TAGTGCCAAAGAACCCTGCGTTCATGGGGAAGATGGTTGAAGTGGACATCTATGAATCAGGCAAACATTTTATG 1461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1388 TAGTGCCAAAGAACCCTGCGTTCATGGGGAAGATGGTTGAAGTGGACATCTATGAATCAGGCAAACATTTTATG 1461
Query 1462 AAAGGGCAGCCAGTATCTGATGCCAAAGTGTACACGCCCTCCATCAGCAAACCGCTAGCAAAGGGAGAAGTCTC 1535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1462 AAAGGGCAGCCAGTATCTGATGCCAAAGTGTACACGCCCTCCATCAGCAAACCGCTAGCAAAGGGAGAAGTCTC 1535
Query 1536 GGGTTTGACAAAGGACTTCAGAAATGGGCTTGGGAACCAGCTGAGTTCAGGATCCCACACCTCTGCTGCATCTC 1609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1536 GGGTTTGACAAAGGACTTCAGAAATGGGCTTGGGAACCAGCTGAGTTCAGGATCCCACACCTCTGCTGCATCTC 1609
Query 1610 AGTGTGACTCAGCGAGTTCCAGAATGGTGCTGCCCATGCCAAGGCTACATCAAGACTGTGCGCTGAGGATGTCC 1683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1610 AGTGTGACTCAGCGAGTTCCAGAATGGTGCTGCCCATGCCAAGGCTACATCAAGACTGTGCGCTGAGGATGTCC 1683
Query 1684 GTGGGCTTGGCTCTGCTGGGTCTTCTTTTTGCTTTTTTTGTCAAGGTCTATAAT-------------------- 1737
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1684 GTGGGCTTGGCTCTGCTGGGTCTTCTTTTTGCTTTTTTTGTCAAGGTCTATAATTAGAATACAACTAATGGAAA 1757
Query 1738 -------------------------------------------------------------------------- 1737
Sbjct 1758 CATCTATAAAGAAGAATACATTTCTAATTAAAATCTTCAATGAACAGGAAAGCGACATCTCCATTCTCCAAGGG 1831
Query 1738 -------------------------------------------------------------------------- 1737
Sbjct 1832 CAATAATTTGTACTGGTCATGCTGCCTCCTTCTCAGCCACTCTTCTTAATGAGGCTCCCCCTGTCTCACATTGA 1905
Query 1738 -------------------------------------------------------------------------- 1737
Sbjct 1906 GTTGGGCCCATTGGTTATTTGACCTAAAACCTAATCACCGCTACCATAGCACATCCTTCAAATTAAACTGCTTT 1979
Query 1738 -------------------------------------------------------------------------- 1737
Sbjct 1980 TGGTTTACTTTTAGCAAGAAATGCAAGCGGTTGCATTTTTTTCTGTTTGTTTCAATCTCTAATCTTTAAGTCAG 2053
Query 1738 -------------------------------------------------------------------------- 1737
Sbjct 2054 AACCTAATTGTACAGTGGCTCTGGCCATCTTTTCCTCATGTGGAAGAATTTTCTATCTTTAATAAACTTTTTCT 2127
Query 1738 -------------------------------------------------------------------------- 1737
Sbjct 2128 TTGTTTTTTTTTTCCAGATGGAGTTTCGCTCTTGTCCCCCAGGCTGGAGTGGTGCAGTGGCACGATCTCAGGTC 2201
Query 1738 -------------------------------------------------------------------------- 1737
Sbjct 2202 ACTGCAACCTCTGCCTCCTGGGTTCAAACGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCATG 2275
Query 1738 -------------------------------------------------------------------------- 1737
Sbjct 2276 CGCCACCAAGCCCAGACAATTTTTTTGTGTTTTCAGTAGAGACGGAGTTTCACCATGTTGGCCAGGCTAGTCTC 2349
Query 1738 -------------------------------------------------------------------------- 1737
Sbjct 2350 GAACTCCTGACCTCAAGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTAGGATTACAGGCGTGAGCCACTGCGC 2423
Query 1738 -------------------------------------------------------------------------- 1737
Sbjct 2424 CCGGCCTCTTTAATAAATATTTTTAAGTGCATCTTCCCCTTCAGGCTTTGTTTGGAGTCCCAGTGCTACAAACA 2497
Query 1738 -------------------------------------------------------------------------- 1737
Sbjct 2498 TTGTATTTTTCACAGCAGATGTGTTCCTGAAAAGTGTATAGAAACCTGTTCTGGGAACCTGAATGCTTTTGGAA 2571
Query 1738 -------------------------------------------------------------------------- 1737
Sbjct 2572 TGCACGGGGAGAGTCTGCCAGCTAAAGGACTCCTGGCAACATTCTGTGAAATATGAAACTGGAAAACTGGATTT 2645
Query 1738 -------------------------------------------------------------------------- 1737
Sbjct 2646 GTCGAAAACTAATTGTGCCCATTTTCTCACATTTTTGATCCATTGGGGTTTTTTTTTTGTTTTTGTTTTTTTTT 2719
Query 1738 -------------------------------------------------------------------------- 1737
Sbjct 2720 TTTTTTGAGTCAAGGTCTCACTCTGTCACCCTGGCTGGAGTGCAATGGCACTATCTTGGCTCACTGCAGCCTTG 2793
Query 1738 -------------------------------------------------------------------------- 1737
Sbjct 2794 ACCTCCTGGACTCAAGCAGTCCTCCTACCTCAGCCTCCCTAATAGCCAGGGGCTACAGGCATATACCACCATGC 2867
Query 1738 -------------------------------------------------------------------------- 1737
Sbjct 2868 CCAACTAATTTTTTAATTTTTTGTAGAGATGAGTGTCACTATGTTGCCCAGGCTTGCCTGGAACTCCTAGCCTC 2941
Query 1738 -------------------------------------------------------------------------- 1737
Sbjct 2942 AAGCAGTCTTCTTGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTCCACCCAGCCCAGATTAA 3015
Query 1738 -------------------------------------------------------------------------- 1737
Sbjct 3016 ATGTTTTTATTTCTACCTGCCATCATTGGTCTTTACTAAGTGAAGTGACTTCTTTCTTTAACAATAAATAGAAT 3089
Query 1738 ---------------- 1737
Sbjct 3090 TGGTATACTAAGCAAA 3105
