Nucleotide Global Alignment
Description
- Query:
- TRCN0000475148
- Subject:
- XR_001741387.1
- Aligned Length:
- 4670
- Identities:
- 111
- Gaps:
- 4544
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TTTCTGCATTAATTTTCTTAGGATAATGGCCTCCAGCTTCATCCATATTGCTGCAAAAAAATGTGATTTTAATG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTTTTTATGGCTGAGTATACTTTCAGTCCAATTAGATTATTTCCTTTCTGCAAGAATCATTGTCCATTTTTAAC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATTCAGTTGAGTCTAGGAAACTTGCATAATTTTTATTCCACATTTTTCTTCTTGAAAAAAAGACTTGGACTTTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TAATTCCATCTTAGCCTAGTGGATAGAGTAAATACTCCGGAAATAAAAAGTGCCAGACAAGGGTCTTTAGTAGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ATGAGGAGCATGGCACAGAGAGAACCTTCTTCAATGATGCTACAAATCTTCAGTAAAAACTCCCATGTGCGCTC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCGCACACACAAACACACAAACACACACACTCTTACTTATTTGGATTTCTTGTTAAAGATTATTATTTTGTAGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TAGATAATAATGGAACAAAACAGTCAGTGTGTGTGGTGGAGAGAACTGATTGTATCTGTAATGCATGAGCGTTA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ACTAGAGTCATTCATGTACAAAGGTTAAAAACGATGTGGTATACAGGCAAAGGAGGATATGTGCATTTTCACTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GATCTTGTTGTTTGGGCACCTGAGACAAGCTGGCAGTCACTAAATCTCAGCGATCACTCAATGTGTGCCAGGCA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TTCGCACACAATATCACTAACACCCATGACAGTCCTTCAAGAGAGGTTCTGCTGTCTGAGAGATTATGTGACAC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GCCTAAGGTCACAGGATCAGCAAATACTAGGGCTGAGATTTAAACCCAGAACTGTCTACTGCCAAAGCTTTTGC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GCTCTCCCTCGTGCCACGTTGCTTCTCATTTTGGGCTTGGTCTCCACTTCCCAGTCCTTGAAGGAGTTCTCCAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GTCTGCCCCATTAGCACTGCATCTCAGAAGGAAGCTGCAGCTGCGCCGCCAATCTCCCGGTGGTAGGTGCTTAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TAAACATTATGAAGTGCATGAACAAATGAATAGCCCCTGATGGACAGACATGCTTGAGAAACACTATTTTTCAC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ATTCCTATCTACACTCAAGATTTTACCTATGATAGCAGGCTGAAGATTCCCAGGATCTTACATCCTAGCAGGCA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ATGCCTCTGCATCCTCATCAGCGAAACCGGATTGATCTTGCCTGCTTCCCTGGCTTTGATGGATGCAACAGAAG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AATATATGCAGAAGTCCCTAATGCAGTGCCTGATGCATGATAAATGCTCAAATATAACAGACAGAAAATCTGTG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TATGTTGTATAAGCCCTGCAGTGTGTGGTACTTTGCTTCAACAGCCAAAGCAAATGAATACAGCCTCCATGGTA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GGCAATGGGACAAGGATTCAGCATTCAGGATCCTACCTGTGTCTTCTTCAGGAGTCTCGGGTATGTCTTTATCA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GCAGCATGAAAATGGACTAATACAGTAAATTGGTACCAGTAGAGTGGGCCATTGCTGAAAATATACCTGAAGAT 1480
Query 1 -------------------------------------------------------------------------A 1
|
Sbjct 1481 GTGGAAGCAACTTTGGAGCTGGGTGACAGGCAGAGGTTGGAATAGTTTGGAGGGCTCAGAAGAAGACAGGAAAA 1554
Query 2 TGGGGGAAAGTTTGGAACTTCCTAGAGACTTGTTGAATGGCTTTGACCAAAATGCTGATAATGATGTGGTCAAT 75
|..||||||.||||||||.|||||||||||||||||||.||||||.|||||||||.||||.||||.||..||||
Sbjct 1555 TATGGGAAATTTTGGAACCTCCTAGAGACTTGTTGAATCGCTTTGCCCAAAATGCCGATAGTGATATGAACAAT 1628
Query 76 GAAATCCAGGCTGAGGTGGTCTCAGATGGAGATGAGGAACTTGTTGGGAAC----------------------- 126
.|..|||||||||||||||||||||||||||||||||.|||||||||||||
Sbjct 1629 AAGGTCCAGGCTGAGGTGGTCTCAGATGGAGATGAGGCACTTGTTGGGAACAGGAGCAAAAGTGACTCTTGTTA 1702
Query 127 -------------------------------------------------------------------------- 126
Sbjct 1703 TGTTTTAGCAAAGAGATTGGCAGCATTTTGCCCCAACCTTAGAGATTTGTGGAACTTTGAAGATGAGAGAGATG 1776
Query 127 -------------------------------------------------------------------------- 126
Sbjct 1777 ATTTAGGGTATCTGGCAGAAAAAATTTCTAAGCAGCAAAGCATTCAAAAGGTGACTTGGGTGCTGTTAAAGGCA 1850
Query 127 -------------------------------------------------------------------------- 126
Sbjct 1851 TTACATTTTAAAAGAGAAACAGAGCATAAAAGTTCAGAAAATTTTCAGCCCGATGATGCAGTAGAAAAGAAAAA 1924
Query 127 -------------------------------------------------------------------------- 126
Sbjct 1925 AACATTTTTTTTAGGAAAAATTCAAGCCAGCTGCAGAAATTTGCATAAGTAGCAAAGAGCCTAATGTTAATCCC 1998
Query 127 -------------------------------------------------------------------------- 126
Sbjct 1999 CAAGACCATGAGGAAAATGTCTCCAGGCTATGTCAGAGATCTTCATGGCAGCCCCTCCCATCACAGGCCCAGAA 2072
Query 127 -------------------------------------------------------------------------- 126
Sbjct 2073 GCCCAGGAGAAAAAAGTGATTGTGTGGGCCGGGCCCAGGGTCCCCATGCTATGTGCAGCCTAGGGACTTGGTGC 2146
Query 127 -------------------------------------------------------------------------- 126
Sbjct 2147 CCTGTGTCCCAGCCATCCCAACTGTAGCTGAAAGGGACCAAGGTACAGCTCCGGCTGTGGCTTCAGAGGGTGGA 2220
Query 127 -------------------------------------------------------------------------- 126
Sbjct 2221 AGCCCCAAGCCTTGGCAGCTTCCATGTGGTGTTGAGCATGCGGAGGCACCGAAGTCAAAAACTGAGGTTTGGGA 2294
Query 127 -------------------------------------------------------------------------- 126
Sbjct 2295 ATTTCTGCCTAGATTTCAGAAGATGTATGGAAATGCCTGGATGCCCAAGCAAAAGTTTGCTGCAGGGGTGGGGC 2368
Query 127 -------------------------------------------------------------------------- 126
Sbjct 2369 GCTTGTGGAAAACCTTTGCTAGGGCAGTGCAGATGGGAAATGTGGGGTCGGAGCCCCCAAACAGGGTCCTTACT 2442
Query 127 -------------------------------------------------------------------------- 126
Sbjct 2443 GTGGTACCGCCTACTGGAGCTGTGGAAAGAAAGCCACCGTTCTCCAGACCTCAGAATGGTAGATCCACCGACAA 2516
Query 127 -------------------------------------------------------------------------- 126
Sbjct 2517 CTTGCACCGCACCGTGCACCTGGAAAAGCCGCAGACATGCAACACAAGCCTGTGAAAGCAGCCAGGAGGGAGGC 2590
Query 127 -------------------------------------------------------------------------- 126
Sbjct 2591 TTTGTACCCTGCAAAGTCACAGAGGGAGAGCTGCCACGACCATGGGAACCCACCTCTTACATCAGCAAGACCTG 2664
Query 127 -------------------------------------------------------------------------- 126
Sbjct 2665 AATGTGAGAACTGGAGTCAAAGGAGATCATTTTGGAGCTTTAAAATTCGACTGCACTGCTGGATTTCAGACTTG 2738
Query 127 -------------------------------------------------------------------------- 126
Sbjct 2739 CATGGACCCTGTAACCCCTTTGTTTTGGCCAATTTCTCCCATTTGGAATGGCTGTATCTACCCAATACCTGTGC 2812
Query 127 -------------------------------------------------------------------------- 126
Sbjct 2813 CCCCATTGTATCTAGGAAGTAACTAACTTGCTTTTGATTTTACAGGCTCCTAGGCAGAAGGGACTTGCCTTGTC 2886
Query 127 -------------------------------------------------------------------------- 126
Sbjct 2887 TCAGATGAGACTTTGGACTGTAGATTTTTGGGTTAATGCTGAAATGAGTTAAGACTTTGGGGGACTGTTGGGAA 2960
Query 127 -------------------------------------------------------------------------- 126
Sbjct 2961 GGCATGATTGGTTTTGATATGTGAGGACGTGAGATTTGGGGGTGGCAAGGGACAAAATGGTATGATTTGGTTTT 3034
Query 127 -------------------------------------------------------------------------- 126
Sbjct 3035 GTCCCACCCCCCGCCCCCAAGATCTCAACTTGAATTTTATCTCCCAGAATTCCCACATGTTGTGGGAGGGGCCC 3108
Query 127 -------------------------------------------------------------------------- 126
Sbjct 3109 AGGTGGAGGTAACTGAATCATGAGGGCCAGTTTTTCCTGTGCTATTCTCGTGATAGTGACTAAGTCTCATGAGA 3182
Query 127 -------------------------------------------------------------------------- 126
Sbjct 3183 CCTGATGGGTTTATCAGGGGTTTCTGCTTTTGCTTCTTCCTCATTTTCTCTTGCTGCCACCATGTAAGATGTGC 3256
Query 127 -------------------------------------------------------------------------- 126
Sbjct 3257 CTTTCACTGCCTGCCATGATCCTGAGGTCTCCCCAGCCACGTGGAACTGTAAGTTCAATTAAACCTCATTTTCT 3330
Query 127 -------------------------------------------------------------------------- 126
Sbjct 3331 TCCCAGTCCTGGGTATGACTTTATCAGCAGCATGAAAATGGACTAATACAGTCACCCTATCATGCAAACAATTT 3404
Query 127 -------------------------------------------------------------------------- 126
Sbjct 3405 ATTCATCTTCCCCTGGGCTGACACTCTTTTTAAAGCCTCCCATATTAACTGAGGATAGTTCTTGCCAACCCCTC 3478
Query 127 -------------------------------------------------------------------------- 126
Sbjct 3479 TGGAAAAGATGGCACCATGCCAAAATGCCTCTTTTCCAATCTTTATATTTCACTTTTGATAGAAGGCATGGCAG 3552
Query 127 -------------------------------------------------------------------------- 126
Sbjct 3553 AGAGTTGGGAATGGGGTAGGATGGGAACTTTCAATTTACCCAACCATGTGTGCCTTCCCTAGTGCCTTATGTTC 3626
Query 127 -------------------------------------------------------------------------- 126
Sbjct 3627 TTTACTTTTCTTAAAATTATTTGCCTTCCCAAATAAGTCATACCTCCAAGACATATTCTATTGGCTACATGGAA 3700
Query 127 -------------------------------------------------------------------------- 126
Sbjct 3701 GGAAAGGAAAGAAAATGAACAATTTCCAAACCCAGTTGAGTGAGCACCTGGGACAAAGAACATAGGCTCTGAAA 3774
Query 127 -------------------------------------------------------------------------- 126
Sbjct 3775 GCATGGGGTTGATACTTCTGTTAGTGTATTTGAGGGTGGGGCAAGGCCTGGAATAAAGCTGGAAGCTGGCCTCT 3848
Query 127 -------------------------------------------------------------------------- 126
Sbjct 3849 TGGGGAGAAAAAAAAAAAAAAACAGGGACAGCATTCAAGGGCAAAATGGAAATTAAAACCAGACAGCTTGTCCA 3922
Query 127 -------------------------------------------------------------------------- 126
Sbjct 3923 ACTAAGTCATCAACCTGCGGGACCTGGAGGAAGAGGACATGACCAGCAAATGGAAGCAAGATTGGCACTAAGGA 3996
Query 127 -------------------------------------------------------------------------- 126
Sbjct 3997 GCAAGAGGGTTCAAAGAGAAGCTTGGGAAGCAGGATGTGGAGAAATTCCATGGAAAGACAGTATGGCCACTACT 4070
Query 127 -------------------------------------------------------------------------- 126
Sbjct 4071 GTTCTTCTGTTTGGTTTTAAAATTTTTATTAGGAAAATTACAGACATATATAAGAGCAGGGGGAATAATATAAT 4144
Query 127 -------------------------------------------------------------------------- 126
Sbjct 4145 AAAATCCTATGTATGCATTTTCAACTTTCAACAATTATTAATCATGATGGCTCTTGTTTCATTCATATGCCCCC 4218
Query 127 -------------------------------------------------------------------------- 126
Sbjct 4219 ATTTCTTCATTCCAGATTGCTTTGAGACATATTCTAGATATATTATTTCATTTATTATTTCAGTATTTCTCTCT 4292
Query 127 -------------------------------------------------------------------------- 126
Sbjct 4293 GAAAGATAAAAGTCTCTTTATAAAAGTGTATTAATAATATTATTACGTCAAAAAAATACACTAGCTGACATGGT 4366
Query 127 -------------------------------------------------------------------------- 126
Sbjct 4367 TTGGTTGTGTCTCCACTCAAATCTCATCTTGAATTGTAGCTCTCATAATTCCTACATGTCATGGGAGGGACCCA 4440
Query 127 -------------------------------------------------------------------------- 126
Sbjct 4441 GTGGGAGGTCATTGAATCATAGGGGTGAGTTTTTCCCATGCTGTTCTCATGACAATGACTAAGTTTCCTGAGAT 4514
Query 127 -------------------------------------------------------------------------- 126
Sbjct 4515 CTGAGGGTTTTAGCAAAGTGAGTTCCCCTGCACATACTATCTTATCTGCTGCCATGTAAGACATGACTTTTCTC 4588
Query 127 -------------------------------------------------------------------------- 126
Sbjct 4589 CTCATTCAACTTCAGCCATGATTGTGAGGCCTCCCCAGCCATGGGGAACTGTGAGCCAATTAAACTTCTTTCTT 4662
Query 127 -------- 126
Sbjct 4663 TTGTAAAT 4670
