Nucleotide Global Alignment

Description

• Query: TRCN0000475160
• Subject: XM_011250030.2
• Aligned Length: 1459
• Identities: 847
• Gaps: 488

Alignment

Query    1  ATGAACATGCCCCAGTCCCTGGGCAACCAGCCACTGCCCCCAGAACCGCCATCCCTTGGAACCCCTGCGGAGGG  74
            |||||||||||||||||.||.||||.||||||||||||.||.||.||.||||||||.||.||.|||...||.||
Sbjct    1  ATGAACATGCCCCAGTCACTAGGCACCCAGCCACTGCCTCCGGAGCCACCATCCCTGGGGACTCCTATAGAAGG  74

Query   75  GCCTGGGACCA-CGTCCCCACCCGAGCACTGCTGGCCAGTGCGCCCGACTCTGCGCAACGAGCTGGACACCTTC  147
            |.||||..||| .|..|||| |.||||||||||||||||||||.||||||||||||||.||||||||.||||||
Sbjct   75  GTCTGGAGCCATAGCACCCA-CTGAGCACTGCTGGCCAGTGCGTCCGACTCTGCGCAATGAGCTGGATACCTTC  147

Query  148  TCTGTCCACTTCTACATCTTCTTTGGCCCAAGTGTGGCCCTTCCCCCTGAGCGCCCAGCCGTGTTCGCCATGAG  221
            ||||||||||||||||||||.|||||.||.||.|||||||||||.||||||||||||||.||.||.|||.||||
Sbjct  148  TCTGTCCACTTCTACATCTTTTTTGGTCCCAGCGTGGCCCTTCCACCTGAGCGCCCAGCTGTATTTGCCCTGAG  221

Query  222  GCTGTTGCCAGTGCTGGACAGTGGAGGCGTCCTCAGCCTGGAGCTCCAGCTCAATGCGAGCTCCGTGCGCCAGG  295
            |||||||||.|||||||||||.||.||||||||.|||||||||||||||||||||||||||||..|||||||||
Sbjct  222  GCTGTTGCCGGTGCTGGACAGCGGGGGCGTCCTTAGCCTGGAGCTCCAGCTCAATGCGAGCTCTCTGCGCCAGG  295

Query  296  AAAACGTGACGGTGTTTGGATGCTTGACTCACGAGGTGCCCTTGAGCCTGGGGGATGCAGCAGTGACCTGTTCC  369
            ||||.||.||.||.||.||||||.|||||||.||||||||||||||||||||||||||.||.||||||||||||
Sbjct  296  AAAATGTAACAGTATTCGGATGCCTGACTCATGAGGTGCCCTTGAGCCTGGGGGATGCTGCTGTGACCTGTTCC  369

Query  370  AAAGAGTCCCTGGCCGGCTTCCTCCTCTCTGTCAGTGCCACCACCAGGGTTGCCAGGCTGCGAATCCCATTCCC  443
            ||||||||||||||.||||||||.|||||.||||||||||||.||||.||.||||||||.||||||||||||||
Sbjct  370  AAAGAGTCCCTGGCAGGCTTCCTTCTCTCGGTCAGTGCCACCTCCAGAGTGGCCAGGCTTCGAATCCCATTCCC  443

Query  444  GCAGACGGGGACCTGGTTCCTGGCCCTCCGCTCCCTGTGCGGGGTGGGGCCTCGGTTCGTGCGGTGCCGCAACG  517
            .|||||||||||||||||||||.|||||||.||.||||||||||||||.||||||||.||||||||||||||.|
Sbjct  444  ACAGACGGGGACCTGGTTCCTGACCCTCCGTTCTCTGTGCGGGGTGGGACCTCGGTTTGTGCGGTGCCGCAATG  517

Query  518  CGACGGCCGAGGTGTGGATGCGCACCTTCCTGTCCCCATGCGTGGACGACTGCGGGCCCTACGGCCAGTGCAAG  591
            |.|||||.||.|||.||.||||.||||||.||||||||||.|||||.|||||.||||||||.|||||||||||.
Sbjct  518  CAACGGCAGAAGTGCGGCTGCGTACCTTCTTGTCCCCATGTGTGGATGACTGTGGGCCCTATGGCCAGTGCAAA  591

Query  592  CTGCTGCGCACACACAATTATCTGTACGCAGCCTGCGAGTGCAAGGCCGGGTGGAGAGGCTGGGGCTGCACCGA  665
            |||||||||||.|||||.||.||||||||.|||||||||||||||||.||||||.|.||||||||.|||||.||
Sbjct  592  CTGCTGCGCACCCACAACTACCTGTACGCGGCCTGCGAGTGCAAGGCTGGGTGGCGGGGCTGGGGTTGCACAGA  665

Query  666  CAGTGCAGATGCGCTCACCTATGGATTCCAGCTGCTGTCCACACTCCTGCTCTGCCTGAGCAACCTCATGTTTC  739
            ||||||.||.||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||.
Sbjct  666  CAGTGCCGACGCGCTCACCTATGGATTCCAGCTGCTGTCCACACTCCTCCTCTGCCTGAGCAACCTCATGTTTT  739

Query  740  TGCCACCTGTGGTCCTGGCCATTCGGAGTCGATATGTGCTGGAAGCTGCAGTCTACACCTTCACCATGTTCTTC  813
            ||||||||||||||||||||||||||||.|||||.||||||||||||||.||||||||||||||||||||||||
Sbjct  740  TGCCACCTGTGGTCCTGGCCATTCGGAGCCGATACGTGCTGGAAGCTGCCGTCTACACCTTCACCATGTTCTTC  813

Query  814  TCCACGGTATGCGGTGGTGTCTGCATCTTATCACTGGGTGCTTGT----------GCATGGTGG-----TGGGT  872
            ||||||                   |..|||||     |||.|||          ||||.||||     ||..|
Sbjct  814  TCCACG-------------------TTCTATCA-----TGCCTGTGACCAGCCAGGCATTGTGGTTTTCTGTAT  863

Query  873  CACAGTC-----TGTATTTCCACCACGTTCTCCGAGGGTT---TGGG------AATGTCTGTG-------CCTT  925
            ||..|.|     ||||.|||     .|||||..||   ||   ||||      ||||||.|||       ||.|
Sbjct  864  CATGGACTATGATGTACTTC-----AGTTCTGTGA---TTTCCTGGGCTCCTTAATGTCCGTGTGGGTCACCGT  929

Query  926  CA-----CTGTGTCTTCTACAGACAGAGA--CAGCAG----------------------TGCTTCCCAAACTGT  970
            ||     .||..||.|||.|||.|.|.||  .|||||                      ||||      .||||
Sbjct  930  CATAGCCATGGCTCGTCTGCAGCCTGTGATCAAGCAGGTGCTGTATCTGCTCGGGGCTATGCT------GCTGT  997

Query  971  C-AT------------------GCATAGATAATG-----------------GTCATTTTTG-----------TA  997
            | ||                  ||||.||...||                 ||| |.||||           |.
Sbjct  998  CTATGGCTCTGCAGCTTGACCGGCATGGACTCTGGAATCTGCTGGGACCCAGTC-TCTTTGCCCTCGGGATCTT  1070

Query  998  AGACACA--TTGGAGTAAA-------------------------------------------------------  1014
            .|.||||  ||||   |.|                                                       
Sbjct 1071  GGCCACAGCTTGG---ACAGTTCGCAGCGTCCGGCGCCGGCACTGTTACCCACCGACATGGCGCCGCTGGCTTT  1141

Query 1015  --------------------------------------------------------------------------  1014
                                                                                      
Sbjct 1142  TCTACCTGTGTCCCGGCAGCCTGATTGCTGGCAGTGCCGTTCTACTGTATGCTTTCGTGGAGACTCGGGACAAC  1215

Query 1015  --------------------------------------------------------------------------  1014
                                                                                      
Sbjct 1216  TACTTCTACATTCACAGCATTTGGCACATGCTCATTGCTGGCAGTGTGGGCTTCCTGCTGCCTCCCCGTGCCAA  1289

Query 1015  --------------------------------------------------------------------------  1014
                                                                                      
Sbjct 1290  GACTGACCGCCGGGTCCCTTCTGGAGCCCGGGCCAGGGGCTGCGGTTACCAGCTGTGCATCAATGAACAGGAGG  1363

Query 1015  -----------------------------------------------------  1014
                                                                 
Sbjct 1364  AGCTGGGACTTGTGGGCCCAGGAGGGACCACTGTCAGCAGCATCTGTGTCAGC  1416