Nucleotide Global Alignment

Description

• Query: TRCN0000475160
• Subject: XM_011517902.2
• Aligned Length: 1505
• Identities: 964
• Gaps: 502

Alignment

Query    1  ATGAACATGCCCCAGTCCCTGGGCAACCAGCCACTGCCCCCAGAACCGCCATCCCTTGGAACCCCTGCGGAGGG  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGAACATGCCCCAGTCCCTGGGCAACCAGCCACTGCCCCCAGAACCGCCATCCCTTGGAACCCCTGCGGAGGG  74

Query   75  GCCTGGGACCACGTCCCCACCCGAGCACTGCTGGCCAGTGCGCCCGACTCTGCGCAACGAGCTGGACACCTTCT  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GCCTGGGACCACGTCCCCACCCGAGCACTGCTGGCCAGTGCGCCCGACTCTGCGCAACGAGCTGGACACCTTCT  148

Query  149  CTGTCCACTTCTACATCTTCTTTGGCCCAAGTGTGGCCCTTCCCCCTGAGCGCCCAGCCGTGTTCGCCATGAGG  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  CTGTCCACTTCTACATCTTCTTTGGCCCAAGTGTGGCCCTTCCCCCTGAGCGCCCAGCCGTGTTCGCCATGAGG  222

Query  223  CTGTTGCCAGTGCTGGACAGTGGAGGCGTCCTCAGCCTGGAGCTCCAGCTCAATGC------------------  278
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||                  
Sbjct  223  CTGTTGCCAGTGCTGGACAGTGGAGGCGTCCTCAGCCTGGAGCTCCAGCTCAATGCGTTTTTCTGTTCTGAGAA  296

Query  279  ------------------------------------------------------------GAGCTCCGTGCGCC  292
                                                                        ||||||||||||||
Sbjct  297  TGGAGGTGAGAGAGCAGCTTTGGCGTGGAGAGCGCCGGGAGGAATGGGCTGTCCTTGGAAGAGCTCCGTGCGCC  370

Query  293  AGGAAAACGTGACGGTGTTTGGATGCTTGACTCACGAGGTGCCCTTGAGCCTGGGGGATGCAGCAGTGACCTGT  366
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AGGAAAACGTGACGGTGTTTGGATGCTTGACTCACGAGGTGCCCTTGAGCCTGGGGGATGCAGCAGTGACCTGT  444

Query  367  TCCAAAGAGTCCCTGGCCGGCTTCCTCCTCTCTGTCAGTGCCACCACCAGGGTTGCCAGGCTGCGAATCCCATT  440
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  TCCAAAGAGTCCCTGGCCGGCTTCCTCCTCTCTGTCAGTGCCACCACCAGGGTTGCCAGGCTGCGAATCCCATT  518

Query  441  CCCGCAGACGGGGACCTGGTTCCTGGCCCTCCGCTCCCTGTGCGGGGTGGGGCCTCGGTTCGTGCGGTGCCGCA  514
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CCCGCAGACGGGGACCTGGTTCCTGGCCCTCCGCTCCCTGTGCGGGGTGGGGCCTCGGTTCGTGCGGTGCCGCA  592

Query  515  ACGCGACGGCCGAGGTGTGGATGCGCACCTTCCTGTCCCCATGCGTGGACGACTGCGGGCCCTACGGCCAGTGC  588
            |||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  ACGCGACGGCCGAGGTGCGGATGCGCACCTTCCTGTCCCCATGCGTGGACGACTGCGGGCCCTACGGCCAGTGC  666

Query  589  AAGCTGCTGCGCACACACAATTATCTGTACGCAGCCTGCGAGTGCAAGGCCGGGTGGAGAGGCTGGGGCTGCAC  662
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  AAGCTGCTGCGCACACACAATTATCTGTACGCAGCCTGCGAGTGCAAGGCCGGGTGGAGAGGCTGGGGCTGCAC  740

Query  663  CGACAGTGCAGATGCGCTCACCTATGGATTCCAGCTGCTGTCCACACTCCTGCTCTGCCTGAGCAACCTCATGT  736
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CGACAGTGCAGATGCGCTCACCTATGGATTCCAGCTGCTGTCCACACTCCTGCTCTGCCTGAGCAACCTCATGT  814

Query  737  TTCTGCCACCTGTGGTCCTGGCCATTCGGAGTCGATATGTGCTGGAAGCTGCAGTCTACACCTTCACCATGTTC  810
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  TTCTGCCACCTGTGGTCCTGGCCATTCGGAGTCGATATGTGCTGGAAGCTGCAGTCTACACCTTCACCATGTTC  888

Query  811  TTCTCCACGGT-----ATGC------------------GGTGG-TGTCTGCATCTT--ATCACTGGGTGCT---  855
            |||||||||.|     ||||                  .|||| |.||||||||.|  |..||...|||||   
Sbjct  889  TTCTCCACGTTCTATCATGCCTGTGACCAGCCAGGCATCGTGGTTTTCTGCATCATGGACTACGATGTGCTGCA  962

Query  856  ----TGTG----CATGG---------TG-----GTGGGTCACAGTCTGTATTTCCA--CCACGTTCT-----CC  900
                ||||    |.|||         ||     |||||||||.|||   |||.|||  .|.|||| |     ||
Sbjct  963  GTTCTGTGATTTCCTGGGCTCCTTAATGTCCGTGTGGGTCACTGTC---ATTGCCATGGCTCGTT-TACAGCCC  1032

Query  901  GAG--------GGT----------TTGGGA---------------ATGTCTGTGC--CTT--------------  925
            |.|        |||          .|||||               |||.||.|||  |||              
Sbjct 1033  GTGGTCAAGCAGGTGCTGTATTTGCTGGGAGCTATGCTGCTGTCCATGGCTCTGCAGCTTGACCGACATGGACT  1106

Query  926  ----------------CACTGTGTCTT-----------------CTACAGACAGAGACA---------------  951
                            |.|.||.||||                 |.||||.|.| ||||               
Sbjct 1107  CTGGAACCTGCTTGGACCCAGTCTCTTCGCCCTGGGGATCTTGGCCACAGCCTG-GACAGTACGCAGCGTCCGC  1179

Query  952  -----GCAGTGCTTCCCA--------------------------------AACTGTCA-------TGCATAGAT  981
                 |||.||||.||||                                ..|||.||       |||  ||..
Sbjct 1180  CGCCGGCACTGCTACCCACCCACGTGGCGCCGCTGGCTTTTCTACTTGTGCCCTGGCAGCCTTATTGC--AGGC  1251

Query  982  AATG--GTCAT---------TTTTGT-AAGACACATTGGAGTAAA-----------------------------  1014
            |.||  |||.|         |||||| .||||.|    |.|..||                             
Sbjct 1252  AGTGCCGTCCTGCTTTATGCTTTTGTGGAGACCC----GGGACAACTACTTCTACATTCACAGCATTTGGCATA  1321

Query 1015  --------------------------------------------------------------------------  1014
                                                                                      
Sbjct 1322  TGCTCATTGCGGGCAGTGTGGGCTTCCTGCTGCCCCCTCGTGCCAAGACTGACCACGGGGTCCCATCTGGAGCC  1395

Query 1015  --------------------------------------------------------------------------  1014
                                                                                      
Sbjct 1396  CGGGCCCGGGGCTGTGGTTACCAGCTATGCATCAACGAGCAGGAGGAGCTGGGCCTCGTGGGCCCAGGAGGGGC  1469

Query 1015  -------------------------  1014
                                     
Sbjct 1470  CACTGTCAGCAGCATCTGTGCCAGC  1494