Nucleotide Global Alignment

Description

• Query: TRCN0000475160
• Subject: XM_011517916.2
• Aligned Length: 1475
• Identities: 809
• Gaps: 586

Alignment

Query    1  ATGAACATGCCCCAGTCCCTGGGCAACCAGCCACTGCCCCCAGAACCGCCATCC---CTTGGAACCCCTGCGGA  71
                  |||  |.|.|   ||   ||.|| |..||||||..|||||.|  ||.|   .||              
Sbjct    1  ------ATG--CGAAT---TG---AAACA-CTTCTGCCCAAAGAACAG--ATTCAAAATT--------------  43

Query   72  GGGGCCTGGGACCACGTCCCCACCCGAGCACTGCTGGCCAG--TGCGCCCGACTCTGC----GCAACGAGCTGG  139
             ||||||.|    .||||.|      |.||.|.||.|..||  |         |||||    |  |.||.||| 
Sbjct   44  -GGGCCTTG----CCGTCTC------ATCAGTCCTTGAAAGATT---------TCTGCTGTGG--AGGATCTG-  94

Query  140  ACACCTTCTCTGTCCACTTCTACATCTTCTTTGGCCCAAGTGTGGCCCTTCCCCCTGAGCGCCCAGC-----CG  208
                 ||.| |.|.||.||.|.| |.||||..|    ||..|.||          ||||.|..||||     ||
Sbjct   95  -----TTGT-TTTTCAGTTTTTC-TGTTCTGAG----AATGGAGG----------TGAGAGAGCAGCTTTGGCG  147

Query  209  TGTTCGCCATGAGGCTGTTGCCAGTGCTGGACAGTGGA---GGC-GTCCTCAGCCTGGAGCTCCAGCTCAATGC  278
            ||        |||         ||.||.||   |.|||   ||| |||||     ||||              .
Sbjct  148  TG--------GAG---------AGCGCCGG---GAGGAATGGGCTGTCCT-----TGGA--------------A  182

Query  279  GAGCTCCGTGCGCCAGGAAAACGTGACGGTGTTTGGATGCTTGACTCACGAGGTGCCCTTGAGCCTGGGGGATG  352
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  183  GAGCTCCGTGCGCCAGGAAAACGTGACGGTGTTTGGATGCTTGACTCACGAGGTGCCCTTGAGCCTGGGGGATG  256

Query  353  CAGCAGTGACCTGTTCCAAAGAGTCCCTGGCCGGCTTCCTCCTCTCTGTCAGTGCCACCACCAGGGTTGCCAGG  426
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  257  CAGCAGTGACCTGTTCCAAAGAGTCCCTGGCCGGCTTCCTCCTCTCTGTCAGTGCCACCACCAGGGTTGCCAGG  330

Query  427  CTGCGAATCCCATTCCCGCAGACGGGGACCTGGTTCCTGGCCCTCCGCTCCCTGTGCGGGGTGGGGCCTCGGTT  500
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  331  CTGCGAATCCCATTCCCGCAGACGGGGACCTGGTTCCTGGCCCTCCGCTCCCTGTGCGGGGTGGGGCCTCGGTT  404

Query  501  CGTGCGGTGCCGCAACGCGACGGCCGAGGTGTGGATGCGCACCTTCCTGTCCCCATGCGTGGACGACTGCGGGC  574
            |||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||
Sbjct  405  CGTGCGGTGCCGCAACGCGACGGCCGAGGTGCGGATGCGCACCTTCCTGTCCCCATGCGTGGACGACTGCGGGC  478

Query  575  CCTACGGCCAGTGCAAGCTGCTGCGCACACACAATTATCTGTACGCAGCCTGCGAGTGCAAGGCCGGGTGGAGA  648
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  479  CCTACGGCCAGTGCAAGCTGCTGCGCACACACAATTATCTGTACGCAGCCTGCGAGTGCAAGGCCGGGTGGAGA  552

Query  649  GGCTGGGGCTGCACCGACAGTGCAGATGCGCTCACCTATGGATTCCAGCTGCTGTCCACACTCCTGCTCTGCCT  722
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  553  GGCTGGGGCTGCACCGACAGTGCAGATGCGCTCACCTATGGATTCCAGCTGCTGTCCACACTCCTGCTCTGCCT  626

Query  723  GAGCAACCTCATGTTTCTGCCACCTGTGGTCCTGGCCATTCGGAGTCGATATGTGCTGGAAGCTGCAGTCTACA  796
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  627  GAGCAACCTCATGTTTCTGCCACCTGTGGTCCTGGCCATTCGGAGTCGATATGTGCTGGAAGCTGCAGTCTACA  700

Query  797  CCTTCACCATGTTCTTCTCCACGGT-----ATGC------------------GGTGG-TGTCTGCATCTT--AT  844
            |||||||||||||||||||||||.|     ||||                  .|||| |.||||||||.|  |.
Sbjct  701  CCTTCACCATGTTCTTCTCCACGTTCTATCATGCCTGTGACCAGCCAGGCATCGTGGTTTTCTGCATCATGGAC  774

Query  845  CACTGGGTGCT-------TGTG----CATGG---------TG-----GTGGGTCACAGTCTGTATTTCCA--CC  891
            .||...|||||       ||||    |.|||         ||     |||||||||.|||   |||.|||  .|
Sbjct  775  TACGATGTGCTGCAGTTCTGTGATTTCCTGGGCTCCTTAATGTCCGTGTGGGTCACTGTC---ATTGCCATGGC  845

Query  892  ACGTTCT-----CCGAG--------GGT----------TTGGGA---------------ATGTCTGTGC--CTT  925
            .|||| |     |||.|        |||          .|||||               |||.||.|||  |||
Sbjct  846  TCGTT-TACAGCCCGTGGTCAAGCAGGTGCTGTATTTGCTGGGAGCTATGCTGCTGTCCATGGCTCTGCAGCTT  918

Query  926  ------------------------------CACTGTGTCTT-----------------CTACAGACAGAGACAG  952
                                          |.|.||.||||                 |.||||.|.|..|| |
Sbjct  919  GACCGACATGGACTCTGGAACCTGCTTGGACCCAGTCTCTTCGCCCTGGGGATCTTGGCCACAGCCTGGTAC-G  991

Query  953  CAG----------------TGCTTCCCA--------------------------------AACTGTCA------  972
            |||                ||||.||||                                ..|||.||      
Sbjct  992  CAGCGTCCGCCGCCGGCACTGCTACCCACCCACGTGGCGCCGCTGGCTTTTCTACTTGTGCCCTGGCAGCCTTA  1065

Query  973  -TGCATAGATAATG--GTCAT---------TTTTGT-AAGACACATTGGAGTAAA-------------------  1014
             |||  ||..|.||  |||.|         |||||| .||||.|    |.|..||                   
Sbjct 1066  TTGC--AGGCAGTGCCGTCCTGCTTTATGCTTTTGTGGAGACCC----GGGACAACTACTTCTACATTCACAGC  1133

Query 1015  --------------------------------------------------------------------------  1014
                                                                                      
Sbjct 1134  ATTTGGCATATGCTCATTGCGGGCAGTGTGGGCTTCCTGCTGCCCCCTCGTGCCAAGACTGACCACGGGGTCCC  1207

Query 1015  --------------------------------------------------------------------------  1014
                                                                                      
Sbjct 1208  ATCTGGAGCCCGGGCCCGGGGCTGTGGTTACCAGCTATGCATCAACGAGCAGGAGGAGCTGGGCCTCGTGGGCC  1281

Query 1015  ---------------------------------------------------------------------  1014
                                                                                 
Sbjct 1282  CAGGAGGGGCCACTGTCAGCAGCATCTGTGCCAGCTGAGAGGGGCTTTGGGCCTGGCCCTGAGGGGATA  1350